BLASTX nr result

ID: Coptis23_contig00030822 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030822
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787...    65   6e-09
ref|XP_002527364.1| conserved hypothetical protein [Ricinus comm...    63   2e-08
emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]    61   8e-08
ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264...    60   2e-07
ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07

>ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787629 [Glycine max]
          Length = 470

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/94 (35%), Positives = 51/94 (54%)
 Frame = +1

Query: 79  WCSWIRPKLGELMINTDGSVTEDSNGFGGVIRDETGAVKLAFTGSSTKKSVMTQELLAIE 258
           WC W +P+ G   +NTDGS+  ++  FGG++RD  G    AF   + +  V   EL AI 
Sbjct: 305 WCEWTKPEFGWTKLNTDGSIHSNTVSFGGLLRDYRGEPICAFVSKAPQGDVFLAELWAIW 364

Query: 259 AGMKGAVDIGATRIIIVSNSQCVVRAIIGKEEPP 360
            G+  ++ +G   I + S+S  VVR +  K+  P
Sbjct: 365 RGLVLSLGLGIKAIWVESDSMSVVRTVNRKQLCP 398


>ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis]
           gi|223533283|gb|EEF35036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 437

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/87 (36%), Positives = 46/87 (52%)
 Frame = +1

Query: 79  WCSWIRPKLGELMINTDGSVTEDSNGFGGVIRDETGAVKLAFTGSSTKKSVMTQELLAIE 258
           WC W +P +G + +NTDGSV     GFGG++RD  G    AF   +    +   EL AI 
Sbjct: 271 WCIWKKPDVGWIKLNTDGSVDRQHAGFGGLLRDNEGNAICAFVSKAPLDDIFLVELWAIW 330

Query: 259 AGMKGAVDIGATRIIIVSNSQCVVRAI 339
            G+  A+ +G   I + S+S   V+ I
Sbjct: 331 RGLVLALGLGIKVIWVESDSMSAVKTI 357


>emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]
          Length = 318

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/91 (35%), Positives = 48/91 (52%)
 Frame = +1

Query: 79  WCSWIRPKLGELMINTDGSVTEDSNGFGGVIRDETGAVKLAFTGSSTKKSVMTQELLAIE 258
           W SW +P+ G   +NTDGS+   + GFGG+ RD  G    A+   + +  +   EL AI 
Sbjct: 152 WYSWEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIW 211

Query: 259 AGMKGAVDIGATRIIIVSNSQCVVRAIIGKE 351
            G+  A  +G   I + S+S  VV+ I  K+
Sbjct: 212 RGLVLASGLGIKAIWVESDSMSVVKTINRKQ 242


>ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264337 [Vitis vinifera]
          Length = 431

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/91 (34%), Positives = 47/91 (51%)
 Frame = +1

Query: 79  WCSWIRPKLGELMINTDGSVTEDSNGFGGVIRDETGAVKLAFTGSSTKKSVMTQELLAIE 258
           W SW +P+ G   +NTDGS+   + GFGG+ RD  G    A+   + +  +   EL AI 
Sbjct: 265 WYSWEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIW 324

Query: 259 AGMKGAVDIGATRIIIVSNSQCVVRAIIGKE 351
            G+  A  +G   I + S+S   V+ I  K+
Sbjct: 325 RGLVLASGLGIKAIWVESDSMSAVKTINRKQ 355


>ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|222856778|gb|EEE94325.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/93 (32%), Positives = 49/93 (52%)
 Frame = +1

Query: 79  WCSWIRPKLGELMINTDGSVTEDSNGFGGVIRDETGAVKLAFTGSSTKKSVMTQELLAIE 258
           WC W RP  G + +NTDGS+  ++ G GG+ RD  G     F   ++   +   EL AI 
Sbjct: 164 WCQWKRPDFGWIKLNTDGSIDSENAGIGGLFRDYEGNAICGFVSKASGHDIFLVELWAIW 223

Query: 259 AGMKGAVDIGATRIIIVSNSQCVVRAIIGKEEP 357
            G+  A+++    + + S+S  VV   I +++P
Sbjct: 224 RGLVLALNLHIQVLWVESDSLSVVNT-INRQQP 255


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