BLASTX nr result

ID: Coptis23_contig00030821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030821
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF93670.1| Dihydrodipicolinate reductase, C-terminus family ...   106   2e-21
emb|CBI31836.3| unnamed protein product [Vitis vinifera]              103   2e-20
ref|XP_002274702.1| PREDICTED: putative dihydrodipicolinate redu...   100   9e-20
ref|XP_003556086.1| PREDICTED: putative dihydrodipicolinate redu...    99   4e-19
ref|XP_003536480.1| PREDICTED: putative dihydrodipicolinate redu...    99   4e-19

>gb|ABF93670.1| Dihydrodipicolinate reductase, C-terminus family protein, expressed
           [Oryza sativa Japonica Group]
           gi|215692764|dbj|BAG88232.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 335

 Score =  106 bits (264), Expect = 2e-21
 Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
 Frame = -1

Query: 295 VCNMEEALEIPIINDLTMVLGSISQVTYXXXXXXXXXXXSTVT------ICVFQILLFVD 134
           +  MEEALEIP++NDLTMVLGSI+QV              TV       +C  +++ F  
Sbjct: 80  ISGMEEALEIPVLNDLTMVLGSIAQVLASSLYYKMLISTCTVVLLYTSRVCYLKLMFF-- 137

Query: 133 S*QSKATGVVVDLTEPSTVYDNVKQATAFGMKSVVYVPKISLDT 2
             Q++ATGVVVD +EPSTVYDNVKQA AFG+ SVVYVPKI LDT
Sbjct: 138 --QTRATGVVVDFSEPSTVYDNVKQAAAFGLNSVVYVPKIELDT 179


>emb|CBI31836.3| unnamed protein product [Vitis vinifera]
          Length = 303

 Score =  103 bits (256), Expect = 2e-20
 Identities = 59/98 (60%), Positives = 63/98 (64%)
 Frame = -1

Query: 295 VCNMEEALEIPIINDLTMVLGSISQVTYXXXXXXXXXXXSTVTICVFQILLFVDS*QSKA 116
           VC MEEALE+PIINDLTMVLGSISQ                               QSKA
Sbjct: 81  VCGMEEALEMPIINDLTMVLGSISQ-------------------------------QSKA 109

Query: 115 TGVVVDLTEPSTVYDNVKQATAFGMKSVVYVPKISLDT 2
           TGVVVD T+PSTVY+NVKQATAFGM SVVYVP+I LDT
Sbjct: 110 TGVVVDFTDPSTVYENVKQATAFGMNSVVYVPRIKLDT 147


>ref|XP_002274702.1| PREDICTED: putative dihydrodipicolinate reductase 3, chloroplastic
           [Vitis vinifera] gi|147816661|emb|CAN68386.1|
           hypothetical protein VITISV_012454 [Vitis vinifera]
          Length = 302

 Score =  100 bits (250), Expect = 9e-20
 Identities = 58/98 (59%), Positives = 62/98 (63%)
 Frame = -1

Query: 295 VCNMEEALEIPIINDLTMVLGSISQVTYXXXXXXXXXXXSTVTICVFQILLFVDS*QSKA 116
           VC MEEALE+PIINDLTMVLGSISQ                                SKA
Sbjct: 81  VCGMEEALEMPIINDLTMVLGSISQ--------------------------------SKA 108

Query: 115 TGVVVDLTEPSTVYDNVKQATAFGMKSVVYVPKISLDT 2
           TGVVVD T+PSTVY+NVKQATAFGM SVVYVP+I LDT
Sbjct: 109 TGVVVDFTDPSTVYENVKQATAFGMNSVVYVPRIKLDT 146


>ref|XP_003556086.1| PREDICTED: putative dihydrodipicolinate reductase 3,
           chloroplastic-like [Glycine max]
          Length = 301

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 56/98 (57%), Positives = 61/98 (62%)
 Frame = -1

Query: 295 VCNMEEALEIPIINDLTMVLGSISQVTYXXXXXXXXXXXSTVTICVFQILLFVDS*QSKA 116
           +C MEE LEIPIINDLTM+LGSISQ                                SKA
Sbjct: 81  ICGMEEPLEIPIINDLTMILGSISQ--------------------------------SKA 108

Query: 115 TGVVVDLTEPSTVYDNVKQATAFGMKSVVYVPKISLDT 2
            GVVVD T+PS+VYDNVKQATAFGMKSVVYVP+I LDT
Sbjct: 109 AGVVVDFTDPSSVYDNVKQATAFGMKSVVYVPQIKLDT 146


>ref|XP_003536480.1| PREDICTED: putative dihydrodipicolinate reductase 3,
           chloroplastic-like [Glycine max]
          Length = 301

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 55/98 (56%), Positives = 61/98 (62%)
 Frame = -1

Query: 295 VCNMEEALEIPIINDLTMVLGSISQVTYXXXXXXXXXXXSTVTICVFQILLFVDS*QSKA 116
           +C MEE LEIPIINDLTM+LGSISQ                                SKA
Sbjct: 81  ICGMEELLEIPIINDLTMILGSISQ--------------------------------SKA 108

Query: 115 TGVVVDLTEPSTVYDNVKQATAFGMKSVVYVPKISLDT 2
            GVVVD T+PS+VYDNVKQATAFGMKS+VYVP+I LDT
Sbjct: 109 AGVVVDFTDPSSVYDNVKQATAFGMKSIVYVPRIKLDT 146


Top