BLASTX nr result

ID: Coptis23_contig00030810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030810
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632834.1| PREDICTED: putative disease resistance prote...    97   2e-18
ref|XP_002268671.2| PREDICTED: putative disease resistance prote...    93   2e-17
emb|CBI36394.3| unnamed protein product [Vitis vinifera]               92   4e-17
ref|XP_003632840.1| PREDICTED: putative disease resistance prote...    90   2e-16
emb|CAN71072.1| hypothetical protein VITISV_000086 [Vitis vinifera]    90   2e-16

>ref|XP_003632834.1| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 904

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 48/77 (62%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
 Frame = +3

Query: 6   LTCLRTLDLGGCEDIVELPNEVERLLHLRYLNL-WGTKVSELPETLCNLYNLQTLQLNEC 182
           LTCLR LDL   + I ELP EV +L+HLRYLNL W   + ELPET+C+LYNLQTL +  C
Sbjct: 556 LTCLRALDLSSNDWIEELPKEVGKLIHLRYLNLSWCESLRELPETICDLYNLQTLNIEGC 615

Query: 183 EKLQKLPNGIGKLSNLR 233
             LQKLP+ +GKL NLR
Sbjct: 616 SSLQKLPHAMGKLINLR 632


>ref|XP_002268671.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 923

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 47/77 (61%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
 Frame = +3

Query: 6   LTCLRTLDLGGCEDIVELPNEVERLLHLRYLNL-WGTKVSELPETLCNLYNLQTLQLNEC 182
           LTCLR LDL   + I ELP EV +L+HLRYLNL +   + ELPET+C+LYNLQTL +  C
Sbjct: 576 LTCLRALDLRSNQLIEELPKEVGKLIHLRYLNLSYCDSLRELPETICDLYNLQTLNIQAC 635

Query: 183 EKLQKLPNGIGKLSNLR 233
            +LQKLP  +GKL NLR
Sbjct: 636 SRLQKLPQAMGKLINLR 652


>emb|CBI36394.3| unnamed protein product [Vitis vinifera]
          Length = 613

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 47/77 (61%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
 Frame = +3

Query: 6   LTCLRTLDLGGCEDIVELPNEVERLLHLRYLNL-WGTKVSELPETLCNLYNLQTLQLNEC 182
           LTCL+ LDL   + I ELP EV +L+HLRYLNL     + ELPET+C+LYNLQTL +  C
Sbjct: 261 LTCLKALDLSSNQLIEELPREVGKLIHLRYLNLSLCLSLRELPETICDLYNLQTLNIQVC 320

Query: 183 EKLQKLPNGIGKLSNLR 233
           E LQKLP  +GKL NLR
Sbjct: 321 ESLQKLPQAMGKLINLR 337


>ref|XP_003632840.1| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 903

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 46/77 (59%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
 Frame = +3

Query: 6   LTCLRTLDLGGCEDIVELPNEVERLLHLRYLNLWGTK-VSELPETLCNLYNLQTLQLNEC 182
           LTCLR LDL   + I ELP EV +L+HLR+LNL G   + ELPET+C+LYNLQTL +  C
Sbjct: 557 LTCLRALDLSSNQLIEELPKEVGKLIHLRFLNLSGCFWLRELPETICDLYNLQTLNIQGC 616

Query: 183 EKLQKLPNGIGKLSNLR 233
             L+KLP  +GKL NLR
Sbjct: 617 SSLRKLPQAMGKLINLR 633


>emb|CAN71072.1| hypothetical protein VITISV_000086 [Vitis vinifera]
          Length = 927

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 47/77 (61%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
 Frame = +3

Query: 6   LTCLRTLDLGGCEDIVELPNEVERLLHLRYLNL-WGTKVSELPETLCNLYNLQTLQLNEC 182
           LTCLR LDL     I ELP EV +L+HLRYLNL    ++ ELPET+C+LYNLQTL +  C
Sbjct: 580 LTCLRALDLSRNRLIEELPKEVGKLIHLRYLNLSLCYRLRELPETICDLYNLQTLNIEGC 639

Query: 183 EKLQKLPNGIGKLSNLR 233
             LQKLP  +GKL NLR
Sbjct: 640 SSLQKLPQAMGKLINLR 656


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