BLASTX nr result

ID: Coptis23_contig00030803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030803
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]   133   1e-29
ref|XP_002303847.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
ref|XP_002329355.1| predicted protein [Populus trichocarpa] gi|2...   122   4e-26
ref|XP_002329350.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|XP_002332079.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-25

>emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]
          Length = 439

 Score =  133 bits (335), Expect = 1e-29
 Identities = 70/139 (50%), Positives = 95/139 (68%), Gaps = 3/139 (2%)
 Frame = +1

Query: 4   IQDQTNTLLRNLIASEQCCDGHST-YMTSYAFLMDNLINSPNDVRILRSSGIITNSLGDD 180
           I+D T++LL NLIA EQCC+  +  Y+T Y  LM+ LINSP DV +L   GII N LGD+
Sbjct: 294 IEDTTDSLLGNLIAFEQCCNRFTPHYITDYVILMEYLINSPKDVALLSRYGIINNLLGDN 353

Query: 181 EDVSILFNKLCGEVTLIN--YYYSDVCDEVNKYCSVPRHVLQATLMRDYFYNPWAFLSFV 354
           E VS LF KL  EV   +  + +S++C +VNKY     H+ +ATL RDYF NPWA +SF+
Sbjct: 354 EGVSHLFKKLGKEVVFNSDKFQFSNLCRDVNKYHKTRWHIWRATLRRDYFNNPWAIISFI 413

Query: 355 GAILVIIFTIAGAVFAILS 411
           GA+L++ FT+   V ++LS
Sbjct: 414 GAVLLLFFTLIQTVCSLLS 432


>ref|XP_002303847.1| predicted protein [Populus trichocarpa] gi|222841279|gb|EEE78826.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score =  122 bits (307), Expect = 2e-26
 Identities = 66/140 (47%), Positives = 86/140 (61%), Gaps = 3/140 (2%)
 Frame = +1

Query: 4   IQDQTNTLLRNLIASEQCCDGHSTYMTSYAFLMDNLINSPNDVRILRSSGIITNSLGDDE 183
           I D T +L RNL+A EQC      Y+T Y  LMD LINS  DV+ILR SGII N LGDD 
Sbjct: 277 IYDTTESLFRNLVAYEQCSQRKHLYVTDYIRLMDCLINSQEDVQILRHSGIIENGLGDDG 336

Query: 184 DVSILFNKLCGEVTLIN---YYYSDVCDEVNKYCSVPRHVLQATLMRDYFYNPWAFLSFV 354
            V  LFN L   V L +   +YY  V D   ++C+  R+V  A L  DYF +PWA LSF+
Sbjct: 337 MVCSLFNTLGINVILSHSRYFYYHKVFDGAKEHCNRKRNVWMAKLKHDYFNSPWALLSFL 396

Query: 355 GAILVIIFTIAGAVFAILSF 414
            A+ +++FT+   VF ++S+
Sbjct: 397 AAVALLLFTLVQTVFTVMSY 416


>ref|XP_002329355.1| predicted protein [Populus trichocarpa] gi|222870405|gb|EEF07536.1|
           predicted protein [Populus trichocarpa]
          Length = 433

 Score =  122 bits (305), Expect = 4e-26
 Identities = 57/140 (40%), Positives = 90/140 (64%)
 Frame = +1

Query: 4   IQDQTNTLLRNLIASEQCCDGHSTYMTSYAFLMDNLINSPNDVRILRSSGIITNSLGDDE 183
           I D T++L RNLIA EQ   G   YMTSYA LMD L+++ +DV +L    II N LG  E
Sbjct: 294 IHDSTDSLFRNLIAFEQSVQGCRQYMTSYALLMDRLVDTSSDVELLAKKRIIQNDLGGYE 353

Query: 184 DVSILFNKLCGEVTLINYYYSDVCDEVNKYCSVPRHVLQATLMRDYFYNPWAFLSFVGAI 363
           DV+ LFN +C +V +  + ++ +C++V+ Y +   H  +A+L +DYF NPW  +SF+ AI
Sbjct: 354 DVTDLFNNICKQVVVREFNFTQLCEQVDAYYNKSWHGYKASLKQDYFKNPWTIISFIAAI 413

Query: 364 LVIIFTIAGAVFAILSFSVN 423
           +++  T    +++++S+  N
Sbjct: 414 VLLSLTTLQTIYSVISYYHN 433


>ref|XP_002329350.1| predicted protein [Populus trichocarpa] gi|222870400|gb|EEF07531.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score =  120 bits (301), Expect = 1e-25
 Identities = 57/140 (40%), Positives = 88/140 (62%)
 Frame = +1

Query: 4   IQDQTNTLLRNLIASEQCCDGHSTYMTSYAFLMDNLINSPNDVRILRSSGIITNSLGDDE 183
           I D T++L RNLIA EQ       YMTSYA  MD L+++ +DV +L    II N LG  E
Sbjct: 135 IHDSTDSLFRNLIAFEQSMPDCGQYMTSYALFMDRLVDTSSDVELLAKKRIIQNDLGGYE 194

Query: 184 DVSILFNKLCGEVTLINYYYSDVCDEVNKYCSVPRHVLQATLMRDYFYNPWAFLSFVGAI 363
           DV+ LFN +C +V +  +Y++ +C++V+ Y +   H  +A+L +DYF NPWA +SF+ AI
Sbjct: 195 DVTDLFNNICKQVVVREFYFTQLCEQVDAYYNKSWHGYKASLKQDYFKNPWAIISFIAAI 254

Query: 364 LVIIFTIAGAVFAILSFSVN 423
           L++       ++++ S+  N
Sbjct: 255 LLLSLATLQTMYSVFSYYHN 274


>ref|XP_002332079.1| predicted protein [Populus trichocarpa] gi|222831965|gb|EEE70442.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score =  119 bits (299), Expect = 2e-25
 Identities = 62/140 (44%), Positives = 88/140 (62%), Gaps = 3/140 (2%)
 Frame = +1

Query: 4   IQDQTNTLLRNLIASEQCCDGHSTYMTSYAFLMDNLINSPNDVRILRSSGIITNSLGDDE 183
           I D T +L RNLIA EQC      Y+T Y  LMD LIN+  DVRILR  GII N LGDDE
Sbjct: 285 IDDTTESLFRNLIAYEQCSQRQHLYVTDYITLMDCLINTREDVRILRHRGIIENGLGDDE 344

Query: 184 DVSILFNKLCGEVTLIN---YYYSDVCDEVNKYCSVPRHVLQATLMRDYFYNPWAFLSFV 354
            V  LFNKL   V + +   +YY+ + + V K+C+  R+V    L R++F +PW+ +SF+
Sbjct: 345 MVCTLFNKLGINVMISDRGRFYYAQLFEGVEKHCAQRRNVWLVKLRRNHFNSPWSLISFL 404

Query: 355 GAILVIIFTIAGAVFAILSF 414
            A+ +++ T+   VF ++S+
Sbjct: 405 AALTLLLLTLVQTVFTVMSY 424


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