BLASTX nr result

ID: Coptis23_contig00030794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030794
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316916.1| white-brown-complex ABC transporter family [...   162   3e-38
emb|CBI20349.3| unnamed protein product [Vitis vinifera]              161   6e-38
ref|XP_002281949.1| PREDICTED: ABC transporter G family member 9...   161   6e-38
emb|CAN62144.1| hypothetical protein VITISV_007841 [Vitis vinifera]   161   6e-38
ref|XP_002533914.1| ATP-binding cassette transporter, putative [...   157   6e-37

>ref|XP_002316916.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222859981|gb|EEE97528.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 619

 Score =  162 bits (410), Expect = 3e-38
 Identities = 80/91 (87%), Positives = 85/91 (93%)
 Frame = +2

Query: 2   DVLYPHLSVTETLVYTALLRLPNTVTKEEKVAHAEEVLTQLGLEKCKNSIIGGPFKRGVS 181
           DVLYPHL+VTETLV+TALLRL NT +KEEK+ HAE V+TQLGL KCKNSIIGGPF RGVS
Sbjct: 124 DVLYPHLTVTETLVFTALLRLENTFSKEEKIMHAESVITQLGLTKCKNSIIGGPFMRGVS 183

Query: 182 GGERKRVSIGQEMLINPSLLFLDEPTSGLDS 274
           GGERKRVSIGQEMLINPSLLFLDEPTSGLDS
Sbjct: 184 GGERKRVSIGQEMLINPSLLFLDEPTSGLDS 214


>emb|CBI20349.3| unnamed protein product [Vitis vinifera]
          Length = 574

 Score =  161 bits (407), Expect = 6e-38
 Identities = 79/91 (86%), Positives = 86/91 (94%)
 Frame = +2

Query: 2   DVLYPHLSVTETLVYTALLRLPNTVTKEEKVAHAEEVLTQLGLEKCKNSIIGGPFKRGVS 181
           DVLYPHL+VTETLV+TALLRLPNT++KE+KV HAE V+TQLGL KCK+SIIG PF RGVS
Sbjct: 125 DVLYPHLTVTETLVFTALLRLPNTISKEDKVRHAEAVITQLGLTKCKDSIIGNPFLRGVS 184

Query: 182 GGERKRVSIGQEMLINPSLLFLDEPTSGLDS 274
           GGERKRVSIGQEMLINPSLLFLDEPTSGLDS
Sbjct: 185 GGERKRVSIGQEMLINPSLLFLDEPTSGLDS 215


>ref|XP_002281949.1| PREDICTED: ABC transporter G family member 9-like [Vitis vinifera]
          Length = 623

 Score =  161 bits (407), Expect = 6e-38
 Identities = 79/91 (86%), Positives = 86/91 (94%)
 Frame = +2

Query: 2   DVLYPHLSVTETLVYTALLRLPNTVTKEEKVAHAEEVLTQLGLEKCKNSIIGGPFKRGVS 181
           DVLYPHL+VTETLV+TALLRLPNT++KE+KV HAE V+TQLGL KCK+SIIG PF RGVS
Sbjct: 125 DVLYPHLTVTETLVFTALLRLPNTISKEDKVRHAEAVITQLGLTKCKDSIIGNPFLRGVS 184

Query: 182 GGERKRVSIGQEMLINPSLLFLDEPTSGLDS 274
           GGERKRVSIGQEMLINPSLLFLDEPTSGLDS
Sbjct: 185 GGERKRVSIGQEMLINPSLLFLDEPTSGLDS 215


>emb|CAN62144.1| hypothetical protein VITISV_007841 [Vitis vinifera]
          Length = 603

 Score =  161 bits (407), Expect = 6e-38
 Identities = 79/91 (86%), Positives = 86/91 (94%)
 Frame = +2

Query: 2   DVLYPHLSVTETLVYTALLRLPNTVTKEEKVAHAEEVLTQLGLEKCKNSIIGGPFKRGVS 181
           DVLYPHL+VTETLV+TALLRLPNT++KE+KV HAE V+TQLGL KCK+SIIG PF RGVS
Sbjct: 128 DVLYPHLTVTETLVFTALLRLPNTISKEDKVRHAEAVITQLGLTKCKDSIIGNPFLRGVS 187

Query: 182 GGERKRVSIGQEMLINPSLLFLDEPTSGLDS 274
           GGERKRVSIGQEMLINPSLLFLDEPTSGLDS
Sbjct: 188 GGERKRVSIGQEMLINPSLLFLDEPTSGLDS 218


>ref|XP_002533914.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223526124|gb|EEF28469.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 632

 Score =  157 bits (398), Expect = 6e-37
 Identities = 76/91 (83%), Positives = 84/91 (92%)
 Frame = +2

Query: 2   DVLYPHLSVTETLVYTALLRLPNTVTKEEKVAHAEEVLTQLGLEKCKNSIIGGPFKRGVS 181
           DVLYPHL+VTETLV+TALLRLP  +TK+EK+ H E VLTQLGL +CKNSIIGGPF RG+S
Sbjct: 133 DVLYPHLTVTETLVFTALLRLPKELTKQEKIMHGEAVLTQLGLTRCKNSIIGGPFLRGIS 192

Query: 182 GGERKRVSIGQEMLINPSLLFLDEPTSGLDS 274
           GGERKRVSIGQE+LINPSLLFLDEPTSGLDS
Sbjct: 193 GGERKRVSIGQELLINPSLLFLDEPTSGLDS 223


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