BLASTX nr result

ID: Coptis23_contig00030793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030793
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325438.1| cationic amino acid transporter [Populus tri...   298   9e-79
emb|CBI31244.3| unnamed protein product [Vitis vinifera]              295   6e-78
ref|XP_002271330.1| PREDICTED: high affinity cationic amino acid...   295   6e-78
ref|XP_002319189.1| cationic amino acid transporter [Populus tri...   291   1e-76
gb|ACN25598.1| unknown [Zea mays] gi|413933566|gb|AFW68117.1| hi...   290   1e-76

>ref|XP_002325438.1| cationic amino acid transporter [Populus trichocarpa]
           gi|222862313|gb|EEE99819.1| cationic amino acid
           transporter [Populus trichocarpa]
          Length = 641

 Score =  298 bits (762), Expect = 9e-79
 Identities = 158/232 (68%), Positives = 169/232 (72%)
 Frame = +1

Query: 7   NVCVMAFVIIAGAYLGFKAGWVGYELPSGYFPFGVNGMLAGSATVFFAYIGFDVVASTAX 186
           NVC M F+IIAG YLGFK GW GYELP+GYFPFGV+GMLAGSATVFFAYIGFD VASTA 
Sbjct: 209 NVCAMLFIIIAGTYLGFKTGWAGYELPTGYFPFGVDGMLAGSATVFFAYIGFDSVASTAE 268

Query: 187 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLPIGIGVAVFICCALYMLVSVVIVGLV 366
                                          RDLP+GIG+++ ICC+LYMLVSVVIVGLV
Sbjct: 269 EVKNPQ-------------------------RDLPLGIGLSLSICCSLYMLVSVVIVGLV 303

Query: 367 PYYAMDPDTPISSAFSSHGMQWAAYIITAGAVTALCSTLMGSLLPQPRILMAMARXXXXX 546
           PYYAMDPDTPISSAFS HGMQWAAY+ITAGAV ALCSTLMGS+LPQPRILM         
Sbjct: 304 PYYAMDPDTPISSAFSVHGMQWAAYLITAGAVMALCSTLMGSMLPQPRILM--------- 354

Query: 547 XXXXXXXAMARDGLLPQFFSDVNRRTQVPVKGTIVTGICAAFLSFFMDVSQL 702
                  AMARDGLLP FFSDVNR TQVPVK T+VTG  AA LSFFMDVSQL
Sbjct: 355 -------AMARDGLLPSFFSDVNRSTQVPVKSTLVTGFGAAVLSFFMDVSQL 399


>emb|CBI31244.3| unnamed protein product [Vitis vinifera]
          Length = 619

 Score =  295 bits (755), Expect = 6e-78
 Identities = 158/232 (68%), Positives = 169/232 (72%)
 Frame = +1

Query: 7   NVCVMAFVIIAGAYLGFKAGWVGYELPSGYFPFGVNGMLAGSATVFFAYIGFDVVASTAX 186
           NVC M FV+IAG YLGFK GW GYELP+GYFPFGV+GMLAGSATVFFAYIGFD VASTA 
Sbjct: 185 NVCAMMFVVIAGGYLGFKTGWAGYELPTGYFPFGVDGMLAGSATVFFAYIGFDSVASTAE 244

Query: 187 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLPIGIGVAVFICCALYMLVSVVIVGLV 366
                                          RDLP+GIG A+ I C LYMLVSVVIVGLV
Sbjct: 245 EVKNPQ-------------------------RDLPLGIGAALSISCILYMLVSVVIVGLV 279

Query: 367 PYYAMDPDTPISSAFSSHGMQWAAYIITAGAVTALCSTLMGSLLPQPRILMAMARXXXXX 546
           PYY+MDPDTPIS+AF+SHGM+WAAYIIT GAVTALCSTLMGSLLPQPRILM         
Sbjct: 280 PYYSMDPDTPISTAFASHGMKWAAYIITIGAVTALCSTLMGSLLPQPRILM--------- 330

Query: 547 XXXXXXXAMARDGLLPQFFSDVNRRTQVPVKGTIVTGICAAFLSFFMDVSQL 702
                  AMARDGLLP FFSD+NRRTQVPVK TIVTGI AA L+FFMDVSQL
Sbjct: 331 -------AMARDGLLPSFFSDLNRRTQVPVKATIVTGIGAATLAFFMDVSQL 375


>ref|XP_002271330.1| PREDICTED: high affinity cationic amino acid transporter 1 [Vitis
           vinifera]
          Length = 639

 Score =  295 bits (755), Expect = 6e-78
 Identities = 158/232 (68%), Positives = 169/232 (72%)
 Frame = +1

Query: 7   NVCVMAFVIIAGAYLGFKAGWVGYELPSGYFPFGVNGMLAGSATVFFAYIGFDVVASTAX 186
           NVC M FV+IAG YLGFK GW GYELP+GYFPFGV+GMLAGSATVFFAYIGFD VASTA 
Sbjct: 205 NVCAMMFVVIAGGYLGFKTGWAGYELPTGYFPFGVDGMLAGSATVFFAYIGFDSVASTAE 264

Query: 187 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLPIGIGVAVFICCALYMLVSVVIVGLV 366
                                          RDLP+GIG A+ I C LYMLVSVVIVGLV
Sbjct: 265 EVKNPQ-------------------------RDLPLGIGAALSISCILYMLVSVVIVGLV 299

Query: 367 PYYAMDPDTPISSAFSSHGMQWAAYIITAGAVTALCSTLMGSLLPQPRILMAMARXXXXX 546
           PYY+MDPDTPIS+AF+SHGM+WAAYIIT GAVTALCSTLMGSLLPQPRILM         
Sbjct: 300 PYYSMDPDTPISTAFASHGMKWAAYIITIGAVTALCSTLMGSLLPQPRILM--------- 350

Query: 547 XXXXXXXAMARDGLLPQFFSDVNRRTQVPVKGTIVTGICAAFLSFFMDVSQL 702
                  AMARDGLLP FFSD+NRRTQVPVK TIVTGI AA L+FFMDVSQL
Sbjct: 351 -------AMARDGLLPSFFSDLNRRTQVPVKATIVTGIGAATLAFFMDVSQL 395


>ref|XP_002319189.1| cationic amino acid transporter [Populus trichocarpa]
           gi|222857565|gb|EEE95112.1| cationic amino acid
           transporter [Populus trichocarpa]
          Length = 640

 Score =  291 bits (744), Expect = 1e-76
 Identities = 150/232 (64%), Positives = 171/232 (73%)
 Frame = +1

Query: 7   NVCVMAFVIIAGAYLGFKAGWVGYELPSGYFPFGVNGMLAGSATVFFAYIGFDVVASTAX 186
           NVC M F+IIAG+YLGFK GW GYELP+GYFPFGV+GMLAGSATVFFAYIGFD VASTA 
Sbjct: 206 NVCAMLFIIIAGSYLGFKTGWAGYELPAGYFPFGVDGMLAGSATVFFAYIGFDSVASTAE 265

Query: 187 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLPIGIGVAVFICCALYMLVSVVIVGLV 366
                                          RDLP+GIG+A+ ICC LYMLVSVVIVGLV
Sbjct: 266 EVKNPQ-------------------------RDLPLGIGLALSICCCLYMLVSVVIVGLV 300

Query: 367 PYYAMDPDTPISSAFSSHGMQWAAYIITAGAVTALCSTLMGSLLPQPRILMAMARXXXXX 546
           PYYAMDPDTPISSAF+++GMQWAAY++ AGAV ALCSTLMGS+LPQPRILM         
Sbjct: 301 PYYAMDPDTPISSAFAAYGMQWAAYLVAAGAVMALCSTLMGSILPQPRILM--------- 351

Query: 547 XXXXXXXAMARDGLLPQFFSDVNRRTQVPVKGTIVTGICAAFLSFFMDVSQL 702
                  AMARDGLLP FFSD+N+++QVPVK T+VTG+ +A L+FFMDVSQL
Sbjct: 352 -------AMARDGLLPSFFSDINKKSQVPVKSTLVTGLGSAVLAFFMDVSQL 396


>gb|ACN25598.1| unknown [Zea mays] gi|413933566|gb|AFW68117.1| high-affinity
           cationic amino acid transporter 1 isoform 1 [Zea mays]
           gi|413933567|gb|AFW68118.1| high-affinity cationic amino
           acid transporter 1 isoform 2 [Zea mays]
          Length = 635

 Score =  290 bits (743), Expect = 1e-76
 Identities = 152/234 (64%), Positives = 169/234 (72%)
 Frame = +1

Query: 1   IANVCVMAFVIIAGAYLGFKAGWVGYELPSGYFPFGVNGMLAGSATVFFAYIGFDVVAST 180
           + N CVM FVI+AG+Y+GF+ GWVGY++  GYFP GVNGMLAGSATVFFAYIGFD VAST
Sbjct: 206 VLNACVMIFVIVAGSYIGFQIGWVGYKVSDGYFPHGVNGMLAGSATVFFAYIGFDTVAST 265

Query: 181 AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLPIGIGVAVFICCALYMLVSVVIVG 360
           A                                RDLP+GIGVA+ ICCALYM VSVVIVG
Sbjct: 266 AEEVKNPQ-------------------------RDLPLGIGVALAICCALYMAVSVVIVG 300

Query: 361 LVPYYAMDPDTPISSAFSSHGMQWAAYIITAGAVTALCSTLMGSLLPQPRILMAMARXXX 540
           LVPY+AMDPDTPISSAF+ HGMQWA Y++T+GAV ALCSTLMGSLLPQPRILM       
Sbjct: 301 LVPYFAMDPDTPISSAFARHGMQWAMYVVTSGAVLALCSTLMGSLLPQPRILM------- 353

Query: 541 XXXXXXXXXAMARDGLLPQFFSDVNRRTQVPVKGTIVTGICAAFLSFFMDVSQL 702
                    AMARDGLLP FFSDVN++TQVPVK TIVTGICAA L+F MDVSQL
Sbjct: 354 ---------AMARDGLLPSFFSDVNKQTQVPVKSTIVTGICAAALAFAMDVSQL 398


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