BLASTX nr result

ID: Coptis23_contig00030787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030787
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604042.1| MCM10-like protein [Medicago truncatula] gi|...    55   5e-06

>ref|XP_003604042.1| MCM10-like protein [Medicago truncatula]
           gi|355493090|gb|AES74293.1| MCM10-like protein [Medicago
           truncatula]
          Length = 412

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 10/86 (11%)
 Frame = +3

Query: 3   SQGIRFLTELTGKTHPKDPSKRATLLNKENCCSEKRLSSSMKPS-SATVSNKHPEAKRRK 179
           SQGIRFL+E+ GK  PK   K     N ++ C+ KR SSS+    S+ + N+  + K+ K
Sbjct: 324 SQGIRFLSEVAGKFDPKMMKKEPKTPNDQSKCTTKRKSSSVNMGYSSVIRNQQLDVKKAK 383

Query: 180 TE---------EASEKMIEIELFSSD 230
           TE         +++ KMIE++L SSD
Sbjct: 384 TERQVFVDKATKSTGKMIELDLISSD 409


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