BLASTX nr result

ID: Coptis23_contig00030783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030783
         (1121 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001044606.1| Os01g0814300 [Oryza sativa Japonica Group] g...   137   6e-30
ref|XP_003564466.1| PREDICTED: pentatricopeptide repeat-containi...   132   2e-28
tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea m...   131   3e-28
ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea ma...   131   3e-28
dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]                          126   9e-27

>ref|NP_001044606.1| Os01g0814300 [Oryza sativa Japonica Group]
            gi|20161481|dbj|BAB90405.1| selenium-binding protein-like
            [Oryza sativa Japonica Group] gi|56785052|dbj|BAD82691.1|
            PPR repeat containing protein-like [Oryza sativa Japonica
            Group] gi|113534137|dbj|BAF06520.1| Os01g0814300 [Oryza
            sativa Japonica Group]
          Length = 604

 Score =  137 bits (344), Expect = 6e-30
 Identities = 64/89 (71%), Positives = 72/89 (80%)
 Frame = -3

Query: 1119 WTSVVLHDVGDEEKEGALCEHSERLAIAYGLLKTKAPVVIRVVKNLRVCPDCHEVTKIIS 940
            WT+ VLHDVG+EEKE ALCEHSERLAIAYGLLKTKAP VIRVVKNLR CPDCHEV KI+S
Sbjct: 516  WTAAVLHDVGEEEKEVALCEHSERLAIAYGLLKTKAPHVIRVVKNLRFCPDCHEVAKIVS 575

Query: 939  KLYEREIIXXXXXXXXXXXDGACSCKEYW 853
            K Y+REII           +G+CSCK++W
Sbjct: 576  KSYDREIIVRDRVRFHRFVEGSCSCKDFW 604


>ref|XP_003564466.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980-like
            [Brachypodium distachyon]
          Length = 600

 Score =  132 bits (332), Expect = 2e-28
 Identities = 64/89 (71%), Positives = 69/89 (77%)
 Frame = -3

Query: 1119 WTSVVLHDVGDEEKEGALCEHSERLAIAYGLLKTKAPVVIRVVKNLRVCPDCHEVTKIIS 940
            WT+ VLHDV +EEKE ALCEHSERLAIAYGLLKTKAP VIRVVKNLR CPDCHEVTKIIS
Sbjct: 512  WTAAVLHDVVEEEKEVALCEHSERLAIAYGLLKTKAPHVIRVVKNLRFCPDCHEVTKIIS 571

Query: 939  KLYEREIIXXXXXXXXXXXDGACSCKEYW 853
            K Y REII            G+CSC ++W
Sbjct: 572  KSYGREIIVRDRVRFHRFIGGSCSCNDFW 600


>tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays]
          Length = 648

 Score =  131 bits (330), Expect = 3e-28
 Identities = 61/89 (68%), Positives = 69/89 (77%)
 Frame = -3

Query: 1119 WTSVVLHDVGDEEKEGALCEHSERLAIAYGLLKTKAPVVIRVVKNLRVCPDCHEVTKIIS 940
            WT+ VLHDVG+EEKE ALC+HSERLAIAYGLLKT+AP VIRVVKNLR C DCHEV KIIS
Sbjct: 560  WTAAVLHDVGEEEKEAALCQHSERLAIAYGLLKTRAPHVIRVVKNLRFCLDCHEVAKIIS 619

Query: 939  KLYEREIIXXXXXXXXXXXDGACSCKEYW 853
            K Y REI+            G+CSCK++W
Sbjct: 620  KAYNREIVVRDRVRFHKFMGGSCSCKDFW 648


>ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea mays]
            gi|223948835|gb|ACN28501.1| unknown [Zea mays]
          Length = 599

 Score =  131 bits (330), Expect = 3e-28
 Identities = 61/89 (68%), Positives = 69/89 (77%)
 Frame = -3

Query: 1119 WTSVVLHDVGDEEKEGALCEHSERLAIAYGLLKTKAPVVIRVVKNLRVCPDCHEVTKIIS 940
            WT+ VLHDVG+EEKE ALC+HSERLAIAYGLLKT+AP VIRVVKNLR C DCHEV KIIS
Sbjct: 511  WTAAVLHDVGEEEKEAALCQHSERLAIAYGLLKTRAPHVIRVVKNLRFCLDCHEVAKIIS 570

Query: 939  KLYEREIIXXXXXXXXXXXDGACSCKEYW 853
            K Y REI+            G+CSCK++W
Sbjct: 571  KAYNREIVVRDRVRFHKFMGGSCSCKDFW 599


>dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
          Length = 563

 Score =  126 bits (317), Expect = 9e-27
 Identities = 61/89 (68%), Positives = 68/89 (76%)
 Frame = -3

Query: 1119 WTSVVLHDVGDEEKEGALCEHSERLAIAYGLLKTKAPVVIRVVKNLRVCPDCHEVTKIIS 940
            + SVVLH V DEEKE  L EHSERLAIAYGL+KTKAP  IR+VKNLRVC DCHEVTKIIS
Sbjct: 475  FVSVVLHLVNDEEKENVLYEHSERLAIAYGLMKTKAPATIRIVKNLRVCGDCHEVTKIIS 534

Query: 939  KLYEREIIXXXXXXXXXXXDGACSCKEYW 853
            K+Y+REII           +G CSCK+YW
Sbjct: 535  KIYDREIIVRDRVRFHKFVNGTCSCKDYW 563


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