BLASTX nr result

ID: Coptis23_contig00030771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030771
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300421.1| tRNA isopentenyltransferase [Populus trichoc...   204   5e-51
emb|CBI20214.3| unnamed protein product [Vitis vinifera]              203   1e-50
ref|XP_002283012.1| PREDICTED: tRNA dimethylallyltransferase 9 [...   203   1e-50
ref|XP_004137218.1| PREDICTED: tRNA dimethylallyltransferase 9-l...   196   1e-48
ref|XP_002524264.1| ATP binding protein, putative [Ricinus commu...   191   5e-47

>ref|XP_002300421.1| tRNA isopentenyltransferase [Populus trichocarpa]
           gi|222847679|gb|EEE85226.1| tRNA isopentenyltransferase
           [Populus trichocarpa]
          Length = 443

 Score =  204 bits (520), Expect = 5e-51
 Identities = 96/146 (65%), Positives = 118/146 (80%)
 Frame = -2

Query: 504 LLDIGLLPNSNSATRAIGYRQAMEYLLSCRRQXXXXXXXXXXXXXXXFQKASRNFAKRQL 325
           LLD GLLPNSNSATRAIGYRQAMEYLL CR                 FQKASRNFAKRQ+
Sbjct: 293 LLDEGLLPNSNSATRAIGYRQAMEYLLRCREDGGSSSAGDFYAFLSEFQKASRNFAKRQM 352

Query: 324 TWFRNELIYQWIDASQPLDKVLDFIYEAYHEQSGNLVVPESLQMEKDLSSRREISEMKAY 145
           TWFRNE IY W+DAS+PL+ VL+F+Y+AYH+Q+G+LVVPESL+M+KD++SRRE+ ++KAY
Sbjct: 353 TWFRNEHIYHWLDASKPLEMVLNFVYDAYHDQTGSLVVPESLRMKKDMTSRREVLQLKAY 412

Query: 144 RTKNRHFVRRENCSEVFDWIQNTQAQ 67
           RTKNRHFV R +CS++ DWI+ TQ +
Sbjct: 413 RTKNRHFVSRNDCSDILDWIRTTQGE 438


>emb|CBI20214.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score =  203 bits (516), Expect = 1e-50
 Identities = 96/144 (66%), Positives = 117/144 (81%)
 Frame = -2

Query: 504 LLDIGLLPNSNSATRAIGYRQAMEYLLSCRRQXXXXXXXXXXXXXXXFQKASRNFAKRQL 325
           LLD GLLPNSNSATRAIGYRQAMEYL++CR Q               FQKASRNFAKRQ+
Sbjct: 288 LLDNGLLPNSNSATRAIGYRQAMEYLVTCREQGGRSSPQEFYAFLSEFQKASRNFAKRQM 347

Query: 324 TWFRNELIYQWIDASQPLDKVLDFIYEAYHEQSGNLVVPESLQMEKDLSSRREISEMKAY 145
           TWFRNELIY W+DAS+PL+ VL+FI++AY++Q+G LVVP+SL M+KD+S+ REI E+KAY
Sbjct: 348 TWFRNELIYHWLDASRPLEMVLNFIHDAYYDQTGKLVVPKSLSMKKDMSNNREIKELKAY 407

Query: 144 RTKNRHFVRRENCSEVFDWIQNTQ 73
           RTKNRHF+ RE+CS++ DWI  TQ
Sbjct: 408 RTKNRHFINREDCSDILDWIWRTQ 431


>ref|XP_002283012.1| PREDICTED: tRNA dimethylallyltransferase 9 [Vitis vinifera]
          Length = 447

 Score =  203 bits (516), Expect = 1e-50
 Identities = 96/144 (66%), Positives = 117/144 (81%)
 Frame = -2

Query: 504 LLDIGLLPNSNSATRAIGYRQAMEYLLSCRRQXXXXXXXXXXXXXXXFQKASRNFAKRQL 325
           LLD GLLPNSNSATRAIGYRQAMEYL++CR Q               FQKASRNFAKRQ+
Sbjct: 303 LLDNGLLPNSNSATRAIGYRQAMEYLVTCREQGGRSSPQEFYAFLSEFQKASRNFAKRQM 362

Query: 324 TWFRNELIYQWIDASQPLDKVLDFIYEAYHEQSGNLVVPESLQMEKDLSSRREISEMKAY 145
           TWFRNELIY W+DAS+PL+ VL+FI++AY++Q+G LVVP+SL M+KD+S+ REI E+KAY
Sbjct: 363 TWFRNELIYHWLDASRPLEMVLNFIHDAYYDQTGKLVVPKSLSMKKDMSNNREIKELKAY 422

Query: 144 RTKNRHFVRRENCSEVFDWIQNTQ 73
           RTKNRHF+ RE+CS++ DWI  TQ
Sbjct: 423 RTKNRHFINREDCSDILDWIWRTQ 446


>ref|XP_004137218.1| PREDICTED: tRNA dimethylallyltransferase 9-like [Cucumis sativus]
           gi|449483192|ref|XP_004156518.1| PREDICTED: tRNA
           dimethylallyltransferase 9-like [Cucumis sativus]
          Length = 482

 Score =  196 bits (499), Expect = 1e-48
 Identities = 94/147 (63%), Positives = 117/147 (79%)
 Frame = -2

Query: 504 LLDIGLLPNSNSATRAIGYRQAMEYLLSCRRQXXXXXXXXXXXXXXXFQKASRNFAKRQL 325
           LL+ GLLPNS+SAT+AIGYRQAMEYLL CR+Q               FQKASRNFAKRQL
Sbjct: 330 LLNSGLLPNSSSATKAIGYRQAMEYLLRCRQQGGRSSPEEFYAFLSEFQKASRNFAKRQL 389

Query: 324 TWFRNELIYQWIDASQPLDKVLDFIYEAYHEQSGNLVVPESLQMEKDLSSRREISEMKAY 145
           TWFRNE IY W+DAS+PL+  L+F+Y+AYH +SGN+ VPESL+M++D SS RE SEMKAY
Sbjct: 390 TWFRNERIYHWLDASKPLENALNFVYDAYHSESGNISVPESLRMKRDGSSYREASEMKAY 449

Query: 144 RTKNRHFVRRENCSEVFDWIQNTQAQY 64
           RT+NR+FV+R++C++V DWI  TQ+ Y
Sbjct: 450 RTRNRYFVKRQDCADVLDWIGRTQSVY 476


>ref|XP_002524264.1| ATP binding protein, putative [Ricinus communis]
           gi|223536455|gb|EEF38103.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 446

 Score =  191 bits (485), Expect = 5e-47
 Identities = 93/141 (65%), Positives = 114/141 (80%)
 Frame = -2

Query: 504 LLDIGLLPNSNSATRAIGYRQAMEYLLSCRRQXXXXXXXXXXXXXXXFQKASRNFAKRQL 325
           LLD+GLLPNSNSATRAIGYRQAMEYLL CR+Q               FQKASRNFAKRQ+
Sbjct: 298 LLDMGLLPNSNSATRAIGYRQAMEYLLQCRQQGGRSSAGEFYAFLSEFQKASRNFAKRQM 357

Query: 324 TWFRNELIYQWIDASQPLDKVLDFIYEAYHEQSGNLVVPESLQMEKDLSSRREISEMKAY 145
           TWFRNE IY W++AS+PL+KVL+FIY+AYH+Q+G+LVVPESL+M K  S++RE  ++K Y
Sbjct: 358 TWFRNEHIYHWLNASRPLEKVLNFIYDAYHDQTGSLVVPESLRMNK--SNQRENLQLKTY 415

Query: 144 RTKNRHFVRRENCSEVFDWIQ 82
           RTKNRHFV R +CS++ DWI+
Sbjct: 416 RTKNRHFVSRNDCSDILDWIR 436


Top