BLASTX nr result

ID: Coptis23_contig00030767 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030767
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516899.1| Cullin-1, putative [Ricinus communis] gi|223...   252   3e-65
ref|XP_003550218.1| PREDICTED: cullin-1-like isoform 2 [Glycine ...   252   4e-65
ref|XP_003550217.1| PREDICTED: cullin-1-like isoform 1 [Glycine ...   252   4e-65
ref|XP_002440598.1| hypothetical protein SORBIDRAFT_09g003820 [S...   251   5e-65
ref|XP_002455628.1| hypothetical protein SORBIDRAFT_03g015000 [S...   251   9e-65

>ref|XP_002516899.1| Cullin-1, putative [Ricinus communis] gi|223543987|gb|EEF45513.1|
           Cullin-1, putative [Ricinus communis]
          Length = 744

 Score =  252 bits (644), Expect = 3e-65
 Identities = 113/184 (61%), Positives = 145/184 (78%)
 Frame = +2

Query: 41  MSTKKIIEFEEGWGVMEKGITKLMKILEGYPESPLNSEEYMQLYTTVYTLCTQRPPHDYS 220
           M+ +K I+ E+GW  M+KGITKL  ILEG PE   +SE+YM LYTT+Y +CTQ+PPHDYS
Sbjct: 3   MNERKTIDLEQGWEFMQKGITKLKNILEGLPEPQFSSEDYMMLYTTIYNMCTQKPPHDYS 62

Query: 221 QQLYNQYNRAFDAYFASIVLPSIQEKHGECTLRDLVKRWANHKTLLNWIIPFFHYLDRFF 400
           QQLY++Y  +F+ Y  S VLPS++EKH E  LR+LVKRWANHK ++ W+  FFHYLDR+F
Sbjct: 63  QQLYDKYRESFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYF 122

Query: 401 VTRMKLEPLKNVGLLCFQDLVYEKVKVSVKDVVICLINREREGELIDRALLKDVLDVFVE 580
           + R  L PL  VGL CF+DLVY+++   V+D VI LI++EREGE IDRALLK+VLD+FVE
Sbjct: 123 IARRSLPPLNEVGLTCFRDLVYQELNAKVRDAVISLIDQEREGEQIDRALLKNVLDIFVE 182

Query: 581 MGMG 592
           +GMG
Sbjct: 183 IGMG 186


>ref|XP_003550218.1| PREDICTED: cullin-1-like isoform 2 [Glycine max]
          Length = 709

 Score =  252 bits (643), Expect = 4e-65
 Identities = 114/184 (61%), Positives = 145/184 (78%)
 Frame = +2

Query: 41  MSTKKIIEFEEGWGVMEKGITKLMKILEGYPESPLNSEEYMQLYTTVYTLCTQRPPHDYS 220
           MS +K I+ E+GW  M+KGITKL  ILEG PE   +SE+YM LYTT+Y +CTQ+PPHDYS
Sbjct: 3   MSERKTIDLEQGWDFMQKGITKLKNILEGLPEPQFSSEDYMMLYTTIYNMCTQKPPHDYS 62

Query: 221 QQLYNQYNRAFDAYFASIVLPSIQEKHGECTLRDLVKRWANHKTLLNWIIPFFHYLDRFF 400
           QQLY++Y  +F+ Y  S VLPS++EKH E  LR+LVKRWANHK ++ W+  FFHYLDR+F
Sbjct: 63  QQLYDKYKESFEEYIVSTVLPSLREKHDEFMLRELVKRWANHKIMVRWLSRFFHYLDRYF 122

Query: 401 VTRMKLEPLKNVGLLCFQDLVYEKVKVSVKDVVICLINREREGELIDRALLKDVLDVFVE 580
           + R  L PL  VGL CF+DLVY+++   V+D VI LI++EREGE IDRALLK+VLD+FVE
Sbjct: 123 IARRSLPPLNEVGLTCFRDLVYKELNGKVRDAVISLIDQEREGEQIDRALLKNVLDIFVE 182

Query: 581 MGMG 592
           +GMG
Sbjct: 183 IGMG 186


>ref|XP_003550217.1| PREDICTED: cullin-1-like isoform 1 [Glycine max]
          Length = 744

 Score =  252 bits (643), Expect = 4e-65
 Identities = 114/184 (61%), Positives = 145/184 (78%)
 Frame = +2

Query: 41  MSTKKIIEFEEGWGVMEKGITKLMKILEGYPESPLNSEEYMQLYTTVYTLCTQRPPHDYS 220
           MS +K I+ E+GW  M+KGITKL  ILEG PE   +SE+YM LYTT+Y +CTQ+PPHDYS
Sbjct: 3   MSERKTIDLEQGWDFMQKGITKLKNILEGLPEPQFSSEDYMMLYTTIYNMCTQKPPHDYS 62

Query: 221 QQLYNQYNRAFDAYFASIVLPSIQEKHGECTLRDLVKRWANHKTLLNWIIPFFHYLDRFF 400
           QQLY++Y  +F+ Y  S VLPS++EKH E  LR+LVKRWANHK ++ W+  FFHYLDR+F
Sbjct: 63  QQLYDKYKESFEEYIVSTVLPSLREKHDEFMLRELVKRWANHKIMVRWLSRFFHYLDRYF 122

Query: 401 VTRMKLEPLKNVGLLCFQDLVYEKVKVSVKDVVICLINREREGELIDRALLKDVLDVFVE 580
           + R  L PL  VGL CF+DLVY+++   V+D VI LI++EREGE IDRALLK+VLD+FVE
Sbjct: 123 IARRSLPPLNEVGLTCFRDLVYKELNGKVRDAVISLIDQEREGEQIDRALLKNVLDIFVE 182

Query: 581 MGMG 592
           +GMG
Sbjct: 183 IGMG 186


>ref|XP_002440598.1| hypothetical protein SORBIDRAFT_09g003820 [Sorghum bicolor]
           gi|241945883|gb|EES19028.1| hypothetical protein
           SORBIDRAFT_09g003820 [Sorghum bicolor]
          Length = 744

 Score =  251 bits (642), Expect = 5e-65
 Identities = 110/181 (60%), Positives = 147/181 (81%)
 Frame = +2

Query: 50  KKIIEFEEGWGVMEKGITKLMKILEGYPESPLNSEEYMQLYTTVYTLCTQRPPHDYSQQL 229
           ++ I+ EEGW  M+KGITKL  ILEG PE   +SE+YM LYTT+Y +CTQ+PPHDYSQQL
Sbjct: 6   RRTIDLEEGWAFMQKGITKLKNILEGKPEPQFSSEDYMMLYTTIYNMCTQKPPHDYSQQL 65

Query: 230 YNQYNRAFDAYFASIVLPSIQEKHGECTLRDLVKRWANHKTLLNWIIPFFHYLDRFFVTR 409
           Y++Y  +F+ Y  S+VLPS++EKH E  LR+LV+RW+NHK ++ W+  FFHYLDR+F++R
Sbjct: 66  YDKYRESFEEYITSMVLPSLREKHDEFMLRELVQRWSNHKVMVRWLSRFFHYLDRYFISR 125

Query: 410 MKLEPLKNVGLLCFQDLVYEKVKVSVKDVVICLINREREGELIDRALLKDVLDVFVEMGM 589
             L PLK VGL CF++L+Y+++K  VKD VI LI++EREGE IDRALLK+VLD+FVE+G+
Sbjct: 126 RSLTPLKEVGLTCFRELIYQEIKGQVKDAVIALIDKEREGEQIDRALLKNVLDIFVEIGL 185

Query: 590 G 592
           G
Sbjct: 186 G 186


>ref|XP_002455628.1| hypothetical protein SORBIDRAFT_03g015000 [Sorghum bicolor]
           gi|241927603|gb|EES00748.1| hypothetical protein
           SORBIDRAFT_03g015000 [Sorghum bicolor]
          Length = 744

 Score =  251 bits (640), Expect = 9e-65
 Identities = 112/181 (61%), Positives = 145/181 (80%)
 Frame = +2

Query: 50  KKIIEFEEGWGVMEKGITKLMKILEGYPESPLNSEEYMQLYTTVYTLCTQRPPHDYSQQL 229
           +K I+ E+GW  M+KGITKL  ILEG PE   +SE+YM LYTT+Y +CTQ+PPHDYSQQL
Sbjct: 6   RKTIDLEQGWEFMQKGITKLKNILEGKPEPQFSSEDYMMLYTTIYNMCTQKPPHDYSQQL 65

Query: 230 YNQYNRAFDAYFASIVLPSIQEKHGECTLRDLVKRWANHKTLLNWIIPFFHYLDRFFVTR 409
           Y +Y  +F+ Y  S+VLPS++EKH E  LR+LVKRW+NHK ++ W+  FFHYLDR+F++R
Sbjct: 66  YEKYRESFEEYITSMVLPSLREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFISR 125

Query: 410 MKLEPLKNVGLLCFQDLVYEKVKVSVKDVVICLINREREGELIDRALLKDVLDVFVEMGM 589
             L PL+ VGL CF+DLVY+++K  VK  VI LI+REREGE IDRALLK+VLD+FVE+G+
Sbjct: 126 RSLPPLREVGLSCFRDLVYQEIKGKVKSAVISLIDREREGEQIDRALLKNVLDIFVEIGL 185

Query: 590 G 592
           G
Sbjct: 186 G 186


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