BLASTX nr result

ID: Coptis23_contig00030764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030764
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532882.1| conserved hypothetical protein [Ricinus comm...   246   3e-63
emb|CBI38427.3| unnamed protein product [Vitis vinifera]              244   7e-63
ref|XP_002309973.1| predicted protein [Populus trichocarpa] gi|2...   244   1e-62
gb|ABR18048.1| unknown [Picea sitchensis]                             155   7e-36
ref|XP_003517759.1| PREDICTED: uncharacterized protein LOC100788...   124   1e-26

>ref|XP_002532882.1| conserved hypothetical protein [Ricinus communis]
           gi|223527367|gb|EEF29511.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 302

 Score =  246 bits (627), Expect = 3e-63
 Identities = 112/206 (54%), Positives = 139/206 (67%)
 Frame = -1

Query: 618 GSPLFNPYVSCAGGGDKLLLTTHTGXXXXXXXXXXXXXXXXXXXXXXTCNSMQSSPNFGL 439
           GSP F PY++CA GGD+LLLTTHTG                      TC SM  SPN GL
Sbjct: 49  GSPRFYPYITCASGGDQLLLTTHTGSYPITSISYTATTITISPPSMSTCTSMHQSPNLGL 108

Query: 438 DWPSPFQLGPSTFILLSCPPPTSSLTIKGTPICDDTVNSHLCGLIHTCPAMVSLGLSIFA 259
           DW SPFQLGPSTF+LLSCPPPTSSLT+KG+P+CD + +S+LC  I+TCP+++ LGL +F 
Sbjct: 109 DWASPFQLGPSTFLLLSCPPPTSSLTMKGSPVCDAS-SSYLCASIYTCPSVIGLGLPLFP 167

Query: 258 PTNTCCVYSPANLNTMGDLDLKSLKCASYVSVVSLGDVPTDPSSWVYGITLKYNQIGVDN 79
           PTNTCCVY+PAN N   +LDL  LKC+ Y S++SL D PTDP+ W YG+ L Y     D+
Sbjct: 168 PTNTCCVYAPANFNGKSELDLHMLKCSGYASIISLQDYPTDPTRWEYGVVLNYRSGAFDD 227

Query: 78  SNIATRCEACRKSDGICGYAPPRNNF 1
             + T+C  C  S G+CGYA P  +F
Sbjct: 228 FYMDTKCNTCESSGGVCGYAAPGYSF 253


>emb|CBI38427.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score =  244 bits (624), Expect = 7e-63
 Identities = 121/210 (57%), Positives = 142/210 (67%), Gaps = 4/210 (1%)
 Frame = -1

Query: 618 GSPLFNPYVSCA---GGGDKLLLTTHTGXXXXXXXXXXXXXXXXXXXXXXTCNSMQSSPN 448
           GSP F PY+SC+    GGD+LLL THTG                       C SMQ SPN
Sbjct: 49  GSPRFQPYISCSQSSDGGDQLLLRTHTGVYPITSISYEAAAFTVTPPLMSNCTSMQPSPN 108

Query: 447 FGLDWPSPFQLGPSTFILLSCPPPTSSLTIKGTP-ICDDTVNSHLCGLIHTCPAMVSLGL 271
            GLDW SPFQLGPS FILLSCPP   SLT K +P ICD ++ SHLC  I+TCP++VSLGL
Sbjct: 109 LGLDWASPFQLGPSAFILLSCPP---SLTSKASPPICDPSL-SHLCASIYTCPSVVSLGL 164

Query: 270 SIFAPTNTCCVYSPANLNTMGDLDLKSLKCASYVSVVSLGDVPTDPSSWVYGITLKYNQI 91
            +F PTN+CCVYSPAN NT G+LDL +LKCA+Y SVV+LGD PTDP+ W YG+  KY Q 
Sbjct: 165 PLFPPTNSCCVYSPANFNTKGELDLHALKCAAYASVVTLGDYPTDPTRWEYGVVFKYTQG 224

Query: 90  GVDNSNIATRCEACRKSDGICGYAPPRNNF 1
             DN  + T+C AC  S G+CGYAPP N+F
Sbjct: 225 KFDNYGMDTKCYACDSSGGVCGYAPPSNSF 254


>ref|XP_002309973.1| predicted protein [Populus trichocarpa] gi|222852876|gb|EEE90423.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score =  244 bits (622), Expect = 1e-62
 Identities = 115/206 (55%), Positives = 140/206 (67%)
 Frame = -1

Query: 618 GSPLFNPYVSCAGGGDKLLLTTHTGXXXXXXXXXXXXXXXXXXXXXXTCNSMQSSPNFGL 439
           GSP F+PY++C+  GD+LLLTTHTG                      TC SMQ SPN GL
Sbjct: 53  GSPRFHPYIACSPEGDQLLLTTHTGSYPITSISYTTSTFIITPPHMSTCTSMQQSPNLGL 112

Query: 438 DWPSPFQLGPSTFILLSCPPPTSSLTIKGTPICDDTVNSHLCGLIHTCPAMVSLGLSIFA 259
           DW SPFQLG STF+LLSC PPTSSL IKG+P+CD   +S+LC  I+TCP+++ LGL +F 
Sbjct: 113 DWASPFQLGSSTFLLLSCTPPTSSLNIKGSPVCD--TSSYLCASIYTCPSVIGLGLPLFP 170

Query: 258 PTNTCCVYSPANLNTMGDLDLKSLKCASYVSVVSLGDVPTDPSSWVYGITLKYNQIGVDN 79
           PTNTCCVYSPAN N+ G+LDL+ LKC  Y SVVSL + PTDPS W YG+ LK     +D+
Sbjct: 171 PTNTCCVYSPANFNSKGELDLQKLKCMGYASVVSLQEHPTDPSQWQYGVELKSRGGALDD 230

Query: 78  SNIATRCEACRKSDGICGYAPPRNNF 1
             I  +C  C  S G+CGYAPP N+F
Sbjct: 231 YYIDNKCNTCEISGGVCGYAPPVNSF 256


>gb|ABR18048.1| unknown [Picea sitchensis]
          Length = 323

 Score =  155 bits (391), Expect = 7e-36
 Identities = 81/206 (39%), Positives = 113/206 (54%)
 Frame = -1

Query: 618 GSPLFNPYVSCAGGGDKLLLTTHTGXXXXXXXXXXXXXXXXXXXXXXTCNSMQSSPNFGL 439
           G P F   VSC     KL+ TTH+G                      TC +M SS +FGL
Sbjct: 74  GDPRFQNSVSCVN--QKLMFTTHSGSYPISSIDYSQTTIYLADPQMSTCAAMTSSGSFGL 131

Query: 438 DWPSPFQLGPSTFILLSCPPPTSSLTIKGTPICDDTVNSHLCGLIHTCPAMVSLGLSIFA 259
           D  +PF+     F+LL+C    SS     T    DT +S +C  ++TCP ++ LGL  ++
Sbjct: 132 DAAAPFKFKNDIFVLLNCS--LSSCLYSPTNYLCDTGSSQICSSLYTCPGVLGLGLQQYS 189

Query: 258 PTNTCCVYSPANLNTMGDLDLKSLKCASYVSVVSLGDVPTDPSSWVYGITLKYNQIGVDN 79
           P +TCCVY+P NL +  +++L  L+C SY S+ S GD  TDP+ W YGI LKY+   +DN
Sbjct: 190 PISTCCVYAPINLGSAAEINLAKLQCQSYTSIYSFGDDATDPTRWNYGIALKYS-FNLDN 248

Query: 78  SNIATRCEACRKSDGICGYAPPRNNF 1
           SN  T C +C +S G+CG+    N+F
Sbjct: 249 SNFPTACVSCEQSKGVCGFTGMYNSF 274


>ref|XP_003517759.1| PREDICTED: uncharacterized protein LOC100788392 [Glycine max]
          Length = 294

 Score =  124 bits (311), Expect = 1e-26
 Identities = 76/215 (35%), Positives = 104/215 (48%), Gaps = 9/215 (4%)
 Frame = -1

Query: 618 GSPLFNPYVSCAGGGDKLLLTTHTGXXXXXXXXXXXXXXXXXXXXXXTCNSMQSSPNFGL 439
           G P F P+V+C+    KL  TTHTG                      TC+    S  FGL
Sbjct: 46  GDPRFQPHVTCSN--QKLTFTTHTGSYPVTSIDYTNQVIYISDPTMSTCSCTVPSKGFGL 103

Query: 438 DWPSPFQLGPST-FILLSCPPPTSSLTIKGTPICDDTVNSHL--------CGLIHTCPAM 286
           +W +PF    ST F L+ C   +SS+        DD  NS L        C L+++C  +
Sbjct: 104 NWDAPFTFADSTIFALVDCSMNSSSICQSNG--YDDGSNSKLLCDQGTPICSLLYSCRPI 161

Query: 285 VSLGLSIFAPTNTCCVYSPANLNTMGDLDLKSLKCASYVSVVSLGDVPTDPSSWVYGITL 106
            ++ L    P +TCCVY+P NL    ++DL+ L+C SY    +  D  TDP  W YGI L
Sbjct: 162 STINL----PISTCCVYTPVNLGPAFEMDLQKLQCPSYTGFYNFNDQQTDPEKWNYGIAL 217

Query: 105 KYNQIGVDNSNIATRCEACRKSDGICGYAPPRNNF 1
           KY +  V N +    C+AC +S G+CGY    N+F
Sbjct: 218 KY-KFSVTN-DYPGSCDACERSHGVCGYGGAYNSF 250


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