BLASTX nr result

ID: Coptis23_contig00030752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030752
         (205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI83422.1| chlorophyll synthase [Camellia sinensis]                73   3e-11
ref|XP_002263271.1| PREDICTED: chlorophyll synthase, chloroplast...    70   2e-10
ref|XP_004148612.1| PREDICTED: chlorophyll synthase, chloroplast...    64   1e-08
ref|XP_003547860.1| PREDICTED: chlorophyll synthase, chloroplast...    64   1e-08
ref|XP_003547859.1| PREDICTED: chlorophyll synthase, chloroplast...    64   1e-08

>gb|AEI83422.1| chlorophyll synthase [Camellia sinensis]
          Length = 374

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 39/71 (54%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
 Frame = -3

Query: 200 PNSLSLTSRKLVVKAXXXXXXXXXXXTLPFKV-----SSFKQLLGIRGAAQETEKWKIHL 36
           P SLSLT R+L V+A             P K      SSF QLLGI+GA QET+KWKI L
Sbjct: 29  PISLSLTRRRLTVRATETDANEAIKAEAPDKAPVASGSSFNQLLGIKGAKQETDKWKIRL 88

Query: 35  QLAKPITWPPL 3
           QL KP+TWPPL
Sbjct: 89  QLTKPVTWPPL 99


>ref|XP_002263271.1| PREDICTED: chlorophyll synthase, chloroplastic [Vitis vinifera]
           gi|296083177|emb|CBI22813.3| unnamed protein product
           [Vitis vinifera]
          Length = 370

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 38/71 (53%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
 Frame = -3

Query: 200 PNSLSLTSRKLVVKAXXXXXXXXXXXTLPFKV-----SSFKQLLGIRGAAQETEKWKIHL 36
           P SLSL  R+LVV+A             P K      S+F QLLGI+GAA+ET KWKI L
Sbjct: 25  PISLSLHRRRLVVRAAETDANEAVKSQAPDKAPAGSGSNFNQLLGIKGAAKETNKWKIRL 84

Query: 35  QLAKPITWPPL 3
           QL KP+TWPPL
Sbjct: 85  QLTKPVTWPPL 95


>ref|XP_004148612.1| PREDICTED: chlorophyll synthase, chloroplastic-like [Cucumis
           sativus] gi|449517004|ref|XP_004165536.1| PREDICTED:
           chlorophyll synthase, chloroplastic-like [Cucumis
           sativus]
          Length = 373

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -3

Query: 104 SSFKQLLGIRGAAQETEKWKIHLQLAKPITWPPL 3
           SSF QLLGI+GAAQET KWKI LQL KP+TWPPL
Sbjct: 65  SSFNQLLGIKGAAQETNKWKIRLQLTKPVTWPPL 98


>ref|XP_003547860.1| PREDICTED: chlorophyll synthase, chloroplastic-like isoform 2
           [Glycine max]
          Length = 342

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -3

Query: 104 SSFKQLLGIRGAAQETEKWKIHLQLAKPITWPPL 3
           SSF QLLGI+GAAQET KWKI LQL KP+TWPPL
Sbjct: 34  SSFNQLLGIKGAAQETNKWKIRLQLTKPVTWPPL 67


>ref|XP_003547859.1| PREDICTED: chlorophyll synthase, chloroplastic-like isoform 1
           [Glycine max]
          Length = 378

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -3

Query: 104 SSFKQLLGIRGAAQETEKWKIHLQLAKPITWPPL 3
           SSF QLLGI+GAAQET KWKI LQL KP+TWPPL
Sbjct: 70  SSFNQLLGIKGAAQETNKWKIRLQLTKPVTWPPL 103


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