BLASTX nr result

ID: Coptis23_contig00030737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030737
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273008.1| PREDICTED: LRR receptor-like serine/threonin...   193   1e-47
ref|XP_002306903.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45
ref|XP_002510474.1| serine-threonine protein kinase, plant-type,...   184   5e-45
ref|XP_002533302.1| serine-threonine protein kinase, plant-type,...   183   1e-44
ref|NP_001241130.1| LRR receptor-like serine/threonine-protein k...   182   2e-44

>ref|XP_002273008.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2
           [Vitis vinifera] gi|147819728|emb|CAN73589.1|
           hypothetical protein VITISV_026204 [Vitis vinifera]
          Length = 422

 Score =  193 bits (490), Expect = 1e-47
 Identities = 94/157 (59%), Positives = 115/157 (73%)
 Frame = -3

Query: 471 LQVMDLRHNQLSGPVPSILFNHPSLQQLTLSNNRFTNLEMPITMGTQSELIALDLSNNEL 292
           LQV+DL HN+L+G VP  +F+HP+LQQ+TLSNN F ++E+P    TQS+LIALDLS N+L
Sbjct: 253 LQVLDLSHNRLNGSVPFFVFDHPTLQQVTLSNNHFNSIEVPTNPATQSQLIALDLSYNDL 312

Query: 291 QGLLPSFMGMMPKLSALSVENNSLTGMIPTTYALKTVFPVAGTSPFARLLLGGNYXXXXX 112
           +GLLPSF+ +M KLSALS+ENN  TGMIPT YALK V P AG SPF RL+LGGNY     
Sbjct: 313 RGLLPSFLALMTKLSALSLENNKFTGMIPTQYALKAVVPDAGVSPFERLMLGGNYLFGPI 372

Query: 111 XXXXXXXXXGSAVISLVDNCLYRCPSIFFFCKGRVQK 1
                      A + LVDNCLYRCP++F FC+G  QK
Sbjct: 373 PSPLMELRPDGATVRLVDNCLYRCPAMFSFCQGGEQK 409


>ref|XP_002306903.1| predicted protein [Populus trichocarpa] gi|222856352|gb|EEE93899.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score =  186 bits (471), Expect = 2e-45
 Identities = 94/157 (59%), Positives = 114/157 (72%)
 Frame = -3

Query: 471 LQVMDLRHNQLSGPVPSILFNHPSLQQLTLSNNRFTNLEMPITMGTQSELIALDLSNNEL 292
           LQV+DL HN+LSGP+ S+LF+HPSLQQLTLS+N FT L++P T+G  S LIALD S N+L
Sbjct: 255 LQVLDLSHNKLSGPISSVLFDHPSLQQLTLSHNNFTFLQVPGTVGLTSNLIALDSSYNDL 314

Query: 291 QGLLPSFMGMMPKLSALSVENNSLTGMIPTTYALKTVFPVAGTSPFARLLLGGNYXXXXX 112
           +G+LP F+  MPKLS+LS+ENN  TGMIP+ YALK   P + +S   RLLLGGNY     
Sbjct: 315 RGILPGFLCSMPKLSSLSLENNKFTGMIPSQYALKVAVPRSNSSSLERLLLGGNYLFGPI 374

Query: 111 XXXXXXXXXGSAVISLVDNCLYRCPSIFFFCKGRVQK 1
                    GSA +SLVDNCLYRCP  FFFC+G  QK
Sbjct: 375 PSALMGLKPGSANVSLVDNCLYRCPDTFFFCQGGNQK 411



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/95 (34%), Positives = 51/95 (53%)
 Frame = -3

Query: 471 LQVMDLRHNQLSGPVPSILFNHPSLQQLTLSNNRFTNLEMPITMGTQSELIALDLSNNEL 292
           LQ +D+  N   G +P  L N   L++L+LS N  +  +MP+++ +   L  L L NN L
Sbjct: 114 LQTLDVSDNSFYGSIPDSLSNLTRLRRLSLSINLLSG-KMPVSLVSLDHLEELYLDNNSL 172

Query: 291 QGLLPSFMGMMPKLSALSVENNSLTGMIPTTYALK 187
            G +PS    +  L  L ++ N+L+G  P   ALK
Sbjct: 173 HGSIPSNFSSLVSLKRLEIQENNLSGEFPDLGALK 207


>ref|XP_002510474.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223551175|gb|EEF52661.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 422

 Score =  184 bits (468), Expect = 5e-45
 Identities = 95/157 (60%), Positives = 112/157 (71%)
 Frame = -3

Query: 471 LQVMDLRHNQLSGPVPSILFNHPSLQQLTLSNNRFTNLEMPITMGTQSELIALDLSNNEL 292
           L+V DL HN LSGPV S+LF+HPSLQQLTLS N F +L++P T G+ S+LIA+DLS N L
Sbjct: 253 LEVFDLSHNLLSGPVLSVLFDHPSLQQLTLSYNNFAHLQVPGTRGSTSKLIAVDLSYNNL 312

Query: 291 QGLLPSFMGMMPKLSALSVENNSLTGMIPTTYALKTVFPVAGTSPFARLLLGGNYXXXXX 112
           QGLLP+F G+MPKLSAL++E+N  TGMIPT YALK       TS F RLLLGGNY     
Sbjct: 313 QGLLPAFFGLMPKLSALTLEHNKFTGMIPTQYALKAAVTKGHTSSFERLLLGGNYLFGPI 372

Query: 111 XXXXXXXXXGSAVISLVDNCLYRCPSIFFFCKGRVQK 1
                    GSA +S+VDNCLYRCP   FFC+G  QK
Sbjct: 373 PGPLMGLKPGSANVSIVDNCLYRCPDTLFFCQGGDQK 409



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/98 (36%), Positives = 56/98 (57%)
 Frame = -3

Query: 471 LQVMDLRHNQLSGPVPSILFNHPSLQQLTLSNNRFTNLEMPITMGTQSELIALDLSNNEL 292
           LQ +D+  N  SG +P  L     L++L+LS N  +  E+P+++GT S L  L L NN L
Sbjct: 112 LQTLDISDNSFSGSIPESLAKLIRLRRLSLSKNSLSG-EIPVSLGTLSHLEELYLDNNNL 170

Query: 291 QGLLPSFMGMMPKLSALSVENNSLTGMIPTTYALKTVF 178
           QG LPS    +  L  L ++ N+++G  P   +LK ++
Sbjct: 171 QGPLPSSFSSLVSLKRLEIQENNISGEFPDLGSLKDLY 208


>ref|XP_002533302.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223526867|gb|EEF29079.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 429

 Score =  183 bits (464), Expect = 1e-44
 Identities = 98/164 (59%), Positives = 116/164 (70%), Gaps = 7/164 (4%)
 Frame = -3

Query: 471 LQVMDLRHNQLSGPVPSILFNHPSLQQLTLSNNRFTNLEMPITMGT-----QSELIALDL 307
           LQV+DL HN+LSG VPS+LF HPSLQQLTLS N FT+++ P          QSELIA+DL
Sbjct: 253 LQVLDLSHNKLSGLVPSLLFTHPSLQQLTLSFNYFTSVQSPSPFSLPSSPIQSELIAMDL 312

Query: 306 SNNELQGLLPSFMGMMPKLSALSVENNSLTGMIPTTYALKTVFPVAGT--SPFARLLLGG 133
           SNN+LQG LPSF+ +MPKLSALS+ENN  TGMIPT +A+K    + G+  SPFARLLLGG
Sbjct: 313 SNNQLQGFLPSFLPLMPKLSALSLENNKFTGMIPTQFAIKAAASLIGSGFSPFARLLLGG 372

Query: 132 NYXXXXXXXXXXXXXXGSAVISLVDNCLYRCPSIFFFCKGRVQK 1
           NY              GS  + L DNCLYRCP+ FFFC+G VQK
Sbjct: 373 NYLFGPIPVQLIKLQPGSVDVRLNDNCLYRCPTSFFFCQGGVQK 416



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/98 (34%), Positives = 54/98 (55%)
 Frame = -3

Query: 471 LQVMDLRHNQLSGPVPSILFNHPSLQQLTLSNNRFTNLEMPITMGTQSELIALDLSNNEL 292
           LQ +DL  N   G +P    N   L +L LS N F+N  +P ++G+ ++L  L L NN L
Sbjct: 112 LQTLDLSSNNFYGQIPESFSNLTRLTRLGLSRNWFSN-NIPTSIGSLTKLEELYLDNNIL 170

Query: 291 QGLLPSFMGMMPKLSALSVENNSLTGMIPTTYALKTVF 178
           QG +P+ +  +  L  L +++N L G  P   +LK ++
Sbjct: 171 QGTIPASINGLISLKRLEIQSNKLYGEFPELGSLKNLY 208


>ref|NP_001241130.1| LRR receptor-like serine/threonine-protein kinase GSO1-like
           precursor [Glycine max] gi|223452518|gb|ACM89586.1|
           leucine-rich repeat family protein [Glycine max]
          Length = 422

 Score =  182 bits (463), Expect = 2e-44
 Identities = 96/158 (60%), Positives = 110/158 (69%), Gaps = 1/158 (0%)
 Frame = -3

Query: 471 LQVMDLRHNQLSGPVPSILFNHPSLQQLTLSNNRFTNLEMPIT-MGTQSELIALDLSNNE 295
           LQV+D   NQLSG VPS+ F  PSLQQLTLS N+FTNLE P   + +QS LIA+DLSNN 
Sbjct: 252 LQVVDFSSNQLSGSVPSVFFELPSLQQLTLSFNKFTNLEAPFKGVESQSGLIAVDLSNNR 311

Query: 294 LQGLLPSFMGMMPKLSALSVENNSLTGMIPTTYALKTVFPVAGTSPFARLLLGGNYXXXX 115
           L+G LPSFM +MPKLS+LS+ENN  TG IPT + +KTVFP  G S F RLLLGGNY    
Sbjct: 312 LRGFLPSFMAVMPKLSSLSLENNEFTGRIPTQFGVKTVFPEKGVSSFGRLLLGGNYLLGG 371

Query: 114 XXXXXXXXXXGSAVISLVDNCLYRCPSIFFFCKGRVQK 1
                      SA +SLV NCLYRCP  FFFC+G  QK
Sbjct: 372 IPRPLLALKRDSANVSLVGNCLYRCPHSFFFCQGGQQK 409



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/97 (35%), Positives = 54/97 (55%)
 Frame = -3

Query: 471 LQVMDLRHNQLSGPVPSILFNHPSLQQLTLSNNRFTNLEMPITMGTQSELIALDLSNNEL 292
           LQ +DL +N  SG +P    N   L +L+LS N F+  E+P ++GT S+L  L L NN L
Sbjct: 110 LQTLDLSNNYFSGQIPYSFSNLTRLSRLSLSFNSFSG-EIPSSLGTLSDLQELYLDNNNL 168

Query: 291 QGLLPSFMGMMPKLSALSVENNSLTGMIPTTYALKTV 181
           +G +P     +  L  L +++N L   +P   +L+ +
Sbjct: 169 RGAIPESFNHLANLKRLELQSNKLNTHLPNLESLRNL 205



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/81 (38%), Positives = 46/81 (56%)
 Frame = -3

Query: 438 SGPVPSILFNHPSLQQLTLSNNRFTNLEMPITMGTQSELIALDLSNNELQGLLPSFMGMM 259
           SG + S  +N P LQ L LSNN F+  ++P +    + L  L LS N   G +PS +G +
Sbjct: 97  SGSLSSFTWNLPYLQTLDLSNNYFSG-QIPYSFSNLTRLSRLSLSFNSFSGEIPSSLGTL 155

Query: 258 PKLSALSVENNSLTGMIPTTY 196
             L  L ++NN+L G IP ++
Sbjct: 156 SDLQELYLDNNNLRGAIPESF 176


Top