BLASTX nr result

ID: Coptis23_contig00030716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030716
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308797.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_002448157.1| hypothetical protein SORBIDRAFT_06g022300 [S...   104   7e-21
ref|NP_001170020.1| uncharacterized protein LOC100383930 [Zea ma...   103   1e-20
ref|XP_002322517.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
gb|ACA04864.1| carbohydrate transporter/sugar porter [Picea abies]    103   1e-20

>ref|XP_002308797.1| predicted protein [Populus trichocarpa] gi|222854773|gb|EEE92320.1|
           predicted protein [Populus trichocarpa]
          Length = 579

 Score =  107 bits (267), Expect = 1e-21
 Identities = 56/77 (72%), Positives = 58/77 (75%)
 Frame = -1

Query: 232 AIVMGAAPKPSXXXXXXXXXXXXXGMASMTAPLYISEGSPARIRGALVSFNGLLITGGQF 53
           A+VM  APKP              GMASMTAPLYISE SPARIRGALVS NGLLITGGQF
Sbjct: 111 AVVMAVAPKPWVIVIGRIFVGLGVGMASMTAPLYISEASPARIRGALVSTNGLLITGGQF 170

Query: 52  LAYLINLGFTKVPGTWR 2
           L+YLINLGFTK PGTWR
Sbjct: 171 LSYLINLGFTKAPGTWR 187


>ref|XP_002448157.1| hypothetical protein SORBIDRAFT_06g022300 [Sorghum bicolor]
           gi|241939340|gb|EES12485.1| hypothetical protein
           SORBIDRAFT_06g022300 [Sorghum bicolor]
          Length = 586

 Score =  104 bits (260), Expect = 7e-21
 Identities = 54/77 (70%), Positives = 58/77 (75%)
 Frame = -1

Query: 232 AIVMGAAPKPSXXXXXXXXXXXXXGMASMTAPLYISEGSPARIRGALVSFNGLLITGGQF 53
           A++M  +P P+             GMASMTAPLYISE SPARIRGALVS NGLLITGGQF
Sbjct: 110 AVIMAFSPTPNVIIVGRVFVGLGVGMASMTAPLYISEASPARIRGALVSTNGLLITGGQF 169

Query: 52  LAYLINLGFTKVPGTWR 2
           LAYLINL FTKVPGTWR
Sbjct: 170 LAYLINLAFTKVPGTWR 186


>ref|NP_001170020.1| uncharacterized protein LOC100383930 [Zea mays]
           gi|224032953|gb|ACN35552.1| unknown [Zea mays]
           gi|413918893|gb|AFW58825.1| hypothetical protein
           ZEAMMB73_790016 [Zea mays]
          Length = 591

 Score =  103 bits (258), Expect = 1e-20
 Identities = 54/77 (70%), Positives = 57/77 (74%)
 Frame = -1

Query: 232 AIVMGAAPKPSXXXXXXXXXXXXXGMASMTAPLYISEGSPARIRGALVSFNGLLITGGQF 53
           A++M  +P P              GMASMTAPLYISE SPARIRGALVS NGLLITGGQF
Sbjct: 110 AVIMAFSPTPRVIIVGRVFVGLGVGMASMTAPLYISEASPARIRGALVSTNGLLITGGQF 169

Query: 52  LAYLINLGFTKVPGTWR 2
           LAYLINL FTKVPGTWR
Sbjct: 170 LAYLINLAFTKVPGTWR 186


>ref|XP_002322517.1| predicted protein [Populus trichocarpa] gi|222867147|gb|EEF04278.1|
           predicted protein [Populus trichocarpa]
          Length = 573

 Score =  103 bits (257), Expect = 1e-20
 Identities = 55/77 (71%), Positives = 56/77 (72%)
 Frame = -1

Query: 232 AIVMGAAPKPSXXXXXXXXXXXXXGMASMTAPLYISEGSPARIRGALVSFNGLLITGGQF 53
           AIVM  AP P              GMASMTAPLYISE SPARIRGALVS NGLLITGGQF
Sbjct: 113 AIVMAVAPNPWVIIIGRILVGLGVGMASMTAPLYISEASPARIRGALVSTNGLLITGGQF 172

Query: 52  LAYLINLGFTKVPGTWR 2
           L+YLINL FTK PGTWR
Sbjct: 173 LSYLINLAFTKAPGTWR 189


>gb|ACA04864.1| carbohydrate transporter/sugar porter [Picea abies]
          Length = 160

 Score =  103 bits (257), Expect = 1e-20
 Identities = 53/77 (68%), Positives = 57/77 (74%)
 Frame = -1

Query: 232 AIVMGAAPKPSXXXXXXXXXXXXXGMASMTAPLYISEGSPARIRGALVSFNGLLITGGQF 53
           AI+M AAP PS             GMASMTAPLYISE SPA++RGALVS NG LITGGQF
Sbjct: 57  AILMAAAPNPSVLISGRVFVGLGVGMASMTAPLYISESSPAKVRGALVSTNGFLITGGQF 116

Query: 52  LAYLINLGFTKVPGTWR 2
           L+YLINL FTK PGTWR
Sbjct: 117 LSYLINLAFTKAPGTWR 133


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