BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030702
         (1046 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135473.1| PREDICTED: DNA polymerase lambda-like [Cucum...   266   1e-90
ref|XP_004155400.1| PREDICTED: DNA polymerase lambda-like, parti...   266   1e-90
ref|XP_002266446.2| PREDICTED: DNA polymerase lambda-like [Vitis...   265   2e-89
emb|CBI32097.3| unnamed protein product [Vitis vinifera]              265   3e-89
ref|XP_003613736.1| DNA polymerase beta [Medicago truncatula] gi...   259   5e-86

>ref|XP_004135473.1| PREDICTED: DNA polymerase lambda-like [Cucumis sativus]
          Length = 521

 Score =  266 bits (680), Expect(2) = 1e-90
 Identities = 144/252 (57%), Positives = 173/252 (68%), Gaps = 2/252 (0%)
 Frame = -3

Query: 750 ILLYQWLEESLKSGEKVSEGLYNLKTQMGGVDERGKSLKYFSSGQLKENQFDDDELPHVK 571
           +L YQWLE+SL SGEK SE LY +K    G+DE G+               D  +    K
Sbjct: 85  VLSYQWLEDSLSSGEKASEDLYTVKV---GLDEDGR---------------DKPQQSTPK 126

Query: 570 KVRMFPETSQVACASQGDDNSSSAGDEAPNTGTGFCDSISSHDKSI--PNNQSSLDNSQC 397
           K+ + P  S+      G D  S A      T TG  DS  S  +++  P     + N+  
Sbjct: 127 KLNLSPNNSEAVSFESGGD--SDASTLVTKTATGLEDSKLSIGQTVTSPRTSDFVGNNIA 184

Query: 396 MAYNPPDLNSNLTEIFGKLVGIYRALGDDRRSFSYYKAIQVIEKLSFEIKSVDQVKCLPT 217
           ++Y+PPD+N N+TEIFGKL+ IYRALGD+RRSFSYYKAI VIEKL F I+S+DQVK LP 
Sbjct: 185 LSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFRIESIDQVKHLPA 244

Query: 216 IGKSMQDHIHEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALKLYEKGHRTLDD 37
           IGKS+QDHI EIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATAL+LYEKG+RTLDD
Sbjct: 245 IGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYEKGYRTLDD 304

Query: 36  LKSEDSLTSPQR 1
           L+ E+SLT  Q+
Sbjct: 305 LQKEESLTHAQK 316



 Score = 94.7 bits (234), Expect(2) = 1e-90
 Identities = 49/90 (54%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
 Frame = -2

Query: 1042 MAPKKKGRKKEVAKNPSLETDEHGMFEGMIVYFVENGVQSRRLQIWKEKLVLMGATVEDQ 863
            MAPK++       K+ SL  D HGMF GM+V+ VE GVQ+RRLQIWK+KLV MGA++E++
Sbjct: 1    MAPKRR-------KSQSLSEDPHGMFAGMVVFLVEKGVQTRRLQIWKQKLVQMGASIEER 53

Query: 862  ISKVVTHIFVLDLKTLLQ-VGNEHLMRFKG 776
            +SK+V+HIF   L  LL+ V    L RFKG
Sbjct: 54   LSKMVSHIFASSLDALLEKVDGARLARFKG 83


>ref|XP_004155400.1| PREDICTED: DNA polymerase lambda-like, partial [Cucumis sativus]
          Length = 400

 Score =  266 bits (680), Expect(2) = 1e-90
 Identities = 144/252 (57%), Positives = 173/252 (68%), Gaps = 2/252 (0%)
 Frame = -3

Query: 750 ILLYQWLEESLKSGEKVSEGLYNLKTQMGGVDERGKSLKYFSSGQLKENQFDDDELPHVK 571
           +L YQWLE+SL SGEK SE LY +K    G+DE G+               D  +    K
Sbjct: 85  VLSYQWLEDSLSSGEKASEDLYTVKV---GLDEDGR---------------DKPQQSTPK 126

Query: 570 KVRMFPETSQVACASQGDDNSSSAGDEAPNTGTGFCDSISSHDKSI--PNNQSSLDNSQC 397
           K+ + P  S+      G D  S A      T TG  DS  S  +++  P     + N+  
Sbjct: 127 KLNLSPNNSEAVSFESGGD--SDASTLVTKTATGLEDSKLSIGQTVTSPRTSDFVGNNIA 184

Query: 396 MAYNPPDLNSNLTEIFGKLVGIYRALGDDRRSFSYYKAIQVIEKLSFEIKSVDQVKCLPT 217
           ++Y+PPD+N N+TEIFGKL+ IYRALGD+RRSFSYYKAI VIEKL F I+S+DQVK LP 
Sbjct: 185 LSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFRIESIDQVKHLPA 244

Query: 216 IGKSMQDHIHEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALKLYEKGHRTLDD 37
           IGKS+QDHI EIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATAL+LYEKG+RTLDD
Sbjct: 245 IGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYEKGYRTLDD 304

Query: 36  LKSEDSLTSPQR 1
           L+ E+SLT  Q+
Sbjct: 305 LQKEESLTHAQK 316



 Score = 94.7 bits (234), Expect(2) = 1e-90
 Identities = 49/90 (54%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
 Frame = -2

Query: 1042 MAPKKKGRKKEVAKNPSLETDEHGMFEGMIVYFVENGVQSRRLQIWKEKLVLMGATVEDQ 863
            MAPK++       K+ SL  D HGMF GM+V+ VE GVQ+RRLQIWK+KLV MGA++E++
Sbjct: 1    MAPKRR-------KSQSLSEDPHGMFAGMVVFLVEKGVQTRRLQIWKQKLVQMGASIEER 53

Query: 862  ISKVVTHIFVLDLKTLLQ-VGNEHLMRFKG 776
            +SK+V+HIF   L  LL+ V    L RFKG
Sbjct: 54   LSKMVSHIFASSLDALLEKVDGARLARFKG 83


>ref|XP_002266446.2| PREDICTED: DNA polymerase lambda-like [Vitis vinifera]
          Length = 543

 Score =  265 bits (677), Expect(2) = 2e-89
 Identities = 149/267 (55%), Positives = 180/267 (67%), Gaps = 16/267 (5%)
 Frame = -3

Query: 753 SILLYQWLEESLKSGEKVSEGLYNLKTQMGGVDERGKSLKYFSSGQLKENQFDDDELPHV 574
           ++L YQWLE+SL+ GEK+SE  YNLK      D  G + + F       N  +D   P  
Sbjct: 84  NVLQYQWLEDSLRLGEKISEDSYNLKFDSEVQDGPGNTSEIFPQPSQLNNSREDGA-PQN 142

Query: 573 KKVRMFPETSQVACASQGDDNSSSAGDEAPNTGTGFCDSISSHDKSI----PNNQSS--- 415
           K+++  PE +          N  S  ++  +T     D++   D+S     P N  S   
Sbjct: 143 KRMKSSPEKNM---------NEESRENKRNSTAHETSDTVQGSDESFRTPSPENSGSNTL 193

Query: 414 ---------LDNSQCMAYNPPDLNSNLTEIFGKLVGIYRALGDDRRSFSYYKAIQVIEKL 262
                    LD+S  + Y+PPDLN N+TEIFGKL+ IYRALGDDRRSFSY+KAI VIEKL
Sbjct: 194 GDPNKAVGTLDSS--LPYSPPDLNKNITEIFGKLINIYRALGDDRRSFSYHKAIGVIEKL 251

Query: 261 SFEIKSVDQVKCLPTIGKSMQDHIHEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPA 82
            F+I+S DQVK LPTIGKSMQDHI EIVTTGKLSKLEHFETDEKVRTI+LFGEVWGIGPA
Sbjct: 252 PFKIESADQVKDLPTIGKSMQDHIQEIVTTGKLSKLEHFETDEKVRTINLFGEVWGIGPA 311

Query: 81  TALKLYEKGHRTLDDLKSEDSLTSPQR 1
           TALKLYEKG+RTLDDLK+EDSLT+ Q+
Sbjct: 312 TALKLYEKGYRTLDDLKNEDSLTNAQK 338



 Score = 91.7 bits (226), Expect(2) = 2e-89
 Identities = 48/90 (53%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
 Frame = -2

Query: 1042 MAPKKKGRKKEVAKNPSLETDEHGMFEGMIVYFVENGVQSRRLQIWKEKLVLMGATVEDQ 863
            MAPK K       K+ +  +D +GMF GM+V+ VE GVQ+RRL+IWK+KLV MGAT+ D+
Sbjct: 1    MAPKAK-------KSRAPTSDPNGMFAGMVVFLVEYGVQTRRLEIWKQKLVQMGATIADR 53

Query: 862  ISKVVTHIFVLDLKTLL-QVGNEHLMRFKG 776
            +SK V+H+F ++   LL QVG EHL RF+G
Sbjct: 54   LSKRVSHVFAVNRDALLRQVGREHLERFQG 83


>emb|CBI32097.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score =  265 bits (676), Expect(2) = 3e-89
 Identities = 146/262 (55%), Positives = 183/262 (69%), Gaps = 11/262 (4%)
 Frame = -3

Query: 753 SILLYQWLEESLKSGEKVSEGLYNLKTQMGGVDERGKSLKYFSSGQLKENQFDDDELPHV 574
           ++L YQWLE+SL+ GEK+SE  YNLK      D  G + + F       N  +D   P  
Sbjct: 84  NVLQYQWLEDSLRLGEKISEDSYNLKFDSEVQDGPGNTSEIFPQPSQLNNSREDGA-PQN 142

Query: 573 KKVRMFPETSQVACASQGDDNSSS--------AGDEA---PNTGTGFCDSISSHDKSIPN 427
           K+++  PE +    + +   NS++          DE+   P+      ++++ +     N
Sbjct: 143 KRMKSSPEKNMNEESRENKRNSTAHETSDTVQGSDESFRTPSPENSGSNTLAEYFTISFN 202

Query: 426 NQSSLDNSQCMAYNPPDLNSNLTEIFGKLVGIYRALGDDRRSFSYYKAIQVIEKLSFEIK 247
              +LD+S  + Y+PPDLN N+TEIFGKL+ IYRALGDDRRSFSY+KAI VIEKL F+I+
Sbjct: 203 QVGTLDSS--LPYSPPDLNKNITEIFGKLINIYRALGDDRRSFSYHKAIGVIEKLPFKIE 260

Query: 246 SVDQVKCLPTIGKSMQDHIHEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALKL 67
           S DQVK LPTIGKSMQDHI EIVTTGKLSKLEHFETDEKVRTI+LFGEVWGIGPATALKL
Sbjct: 261 SADQVKDLPTIGKSMQDHIQEIVTTGKLSKLEHFETDEKVRTINLFGEVWGIGPATALKL 320

Query: 66  YEKGHRTLDDLKSEDSLTSPQR 1
           YEKG+RTLDDLK+EDSLT+ Q+
Sbjct: 321 YEKGYRTLDDLKNEDSLTNAQK 342



 Score = 91.7 bits (226), Expect(2) = 3e-89
 Identities = 48/90 (53%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
 Frame = -2

Query: 1042 MAPKKKGRKKEVAKNPSLETDEHGMFEGMIVYFVENGVQSRRLQIWKEKLVLMGATVEDQ 863
            MAPK K       K+ +  +D +GMF GM+V+ VE GVQ+RRL+IWK+KLV MGAT+ D+
Sbjct: 1    MAPKAK-------KSRAPTSDPNGMFAGMVVFLVEYGVQTRRLEIWKQKLVQMGATIADR 53

Query: 862  ISKVVTHIFVLDLKTLL-QVGNEHLMRFKG 776
            +SK V+H+F ++   LL QVG EHL RF+G
Sbjct: 54   LSKRVSHVFAVNRDALLRQVGREHLERFQG 83


>ref|XP_003613736.1| DNA polymerase beta [Medicago truncatula]
           gi|355515071|gb|AES96694.1| DNA polymerase beta
           [Medicago truncatula]
          Length = 531

 Score =  259 bits (662), Expect(2) = 5e-86
 Identities = 143/255 (56%), Positives = 180/255 (70%), Gaps = 4/255 (1%)
 Frame = -3

Query: 753 SILLYQWLEESLKSGEKVSEGLYNLKT--QMGGVDERGKSLKYFSSGQLKENQFDDDELP 580
           S+LLYQWLE+SLKSGEK SE LY LK   Q  G++E   SL       +  +   + +  
Sbjct: 76  SLLLYQWLEDSLKSGEKESEDLYVLKLDPQGEGINEIDTSL---DPEPIDGSLSSEPQQL 132

Query: 579 HVKKVRMFPETSQVACASQGDDNSSSAGDEAPNTGT--GFCDSISSHDKSIPNNQSSLDN 406
             KK++   E +++      +D   +A     NT +  G  + ++  D S P +  S + 
Sbjct: 133 QNKKIKSSSEDAEIVNLKSNEDRRENAPLSLANTASSHGEVEHLNCVD-SRPQHLDSENA 191

Query: 405 SQCMAYNPPDLNSNLTEIFGKLVGIYRALGDDRRSFSYYKAIQVIEKLSFEIKSVDQVKC 226
           +  + Y PPDLN  + EIFGKLV IYRALG+DRRSFSYYKAI VIEKL F+I+S DQ+K 
Sbjct: 192 ASSLPYCPPDLNKKIIEIFGKLVNIYRALGEDRRSFSYYKAISVIEKLPFKIESADQIKN 251

Query: 225 LPTIGKSMQDHIHEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALKLYEKGHRT 46
           LP+IGKSM+DHI EI+TTGKLSKLEHFETDEKV+TISLFGEVWGIGPATALKLYEKGHRT
Sbjct: 252 LPSIGKSMEDHIQEIITTGKLSKLEHFETDEKVQTISLFGEVWGIGPATALKLYEKGHRT 311

Query: 45  LDDLKSEDSLTSPQR 1
           LDDL+++DSLT+ Q+
Sbjct: 312 LDDLRNDDSLTNAQK 326



 Score = 86.3 bits (212), Expect(2) = 5e-86
 Identities = 39/72 (54%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
 Frame = -2

Query: 988 ETDEHGMFEGMIVYFVENGVQSRRLQIWKEKLVLMGATVEDQISKVVTHIFVLDLKTLL- 812
           + +++GMF GM+V+FV  GVQ+RRLQIWK+++V MGA +ED+ SK VTH+F +D  TLL 
Sbjct: 4   KAEQNGMFSGMVVFFVSKGVQARRLQIWKQRMVQMGAVIEDRFSKRVTHVFAVDSHTLLH 63

Query: 811 QVGNEHLMRFKG 776
           +  ++ L RFKG
Sbjct: 64  EFDSQRLSRFKG 75