BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030700
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_717128.1| hypothetical protein BrnapMp031 [Brassica napus...   137   7e-31
ref|YP_173423.1| hypothetical protein NitaMp081 [Nicotiana tabac...   136   2e-30
gb|AFR34361.1| hypothetical protein GlmaxMp54 (mitochondrion) [G...   130   1e-28
ref|YP_006291791.1| orf59 gene product (mitochondrion) [Daucus c...   130   1e-28
ref|XP_003588311.1| NADH-ubiquinone oxidoreductase chain [Medica...   125   5e-27

>ref|YP_717128.1| hypothetical protein BrnapMp031 [Brassica napus]
           gi|353526372|ref|YP_004927445.1| orf115b (mitochondrion)
           [Brassica oleracea] gi|353526719|ref|YP_004927890.1|
           orf115b (mitochondrion) [Brassica rapa subsp.
           campestris] gi|353531401|ref|YP_004927793.1| orf115b
           (mitochondrion) [Brassica juncea]
           gi|37591075|dbj|BAC98877.1| hypothetical protein
           [Brassica napus] gi|335354907|gb|AEH43463.1| orf115b
           [Brassica rapa subsp. campestris]
           gi|335354917|gb|AEH43472.1| orf115b [Brassica oleracea]
           gi|335355134|gb|AEH43687.1| orf115b [Brassica juncea]
           gi|339511336|emb|CBX48391.1| unnamed protein product
           [Brassica napus]
          Length = 115

 Score =  137 bits (346), Expect = 7e-31
 Identities = 68/73 (93%), Positives = 68/73 (93%), Gaps = 1/73 (1%)
 Frame = -2

Query: 242 AAITIQEDTRNWKDKQTHPVDCRATSPTTQERDSLKSQGRGWPRGPTWRLGISAG-NAKV 66
           AAITIQEDTRNWKDKQTHPVDCRATS TTQERDSLKSQGRGWPRGPTWRLGISAG   KV
Sbjct: 43  AAITIQEDTRNWKDKQTHPVDCRATSSTTQERDSLKSQGRGWPRGPTWRLGISAGVPRKV 102

Query: 65  A*SRPADRRKRIN 27
           A SRPADRRKRIN
Sbjct: 103 ATSRPADRRKRIN 115


>ref|YP_173423.1| hypothetical protein NitaMp081 [Nicotiana tabacum]
           gi|56806587|dbj|BAD83488.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 116

 Score =  136 bits (343), Expect = 2e-30
 Identities = 62/66 (93%), Positives = 63/66 (95%)
 Frame = -1

Query: 243 GRYNYPRRHSKLEG*TNPPGGLPSYKSYDTGAGFSKKPRSWVAKRAHLETWDLSRKCEGC 64
           GRYNYPRRHSKLEG TNPPGGLPS KSYDTGAGFSKKPRSWVAKRAHLETWDLSRKCEGC
Sbjct: 42  GRYNYPRRHSKLEGETNPPGGLPSGKSYDTGAGFSKKPRSWVAKRAHLETWDLSRKCEGC 101

Query: 63  LKPAGR 46
            KPAG+
Sbjct: 102 NKPAGQ 107


>gb|AFR34361.1| hypothetical protein GlmaxMp54 (mitochondrion) [Glycine max]
          Length = 101

 Score =  130 bits (327), Expect = 1e-28
 Identities = 60/60 (100%), Positives = 60/60 (100%)
 Frame = -2

Query: 242 AAITIQEDTRNWKDKQTHPVDCRATSPTTQERDSLKSQGRGWPRGPTWRLGISAGNAKVA 63
           AAITIQEDTRNWKDKQTHPVDCRATSPTTQERDSLKSQGRGWPRGPTWRLGISAGNAKVA
Sbjct: 42  AAITIQEDTRNWKDKQTHPVDCRATSPTTQERDSLKSQGRGWPRGPTWRLGISAGNAKVA 101


>ref|YP_006291791.1| orf59 gene product (mitochondrion) [Daucus carota subsp. sativus]
           gi|374082012|gb|AEY81204.1| orf59 (mitochondrion)
           [Daucus carota subsp. sativus]
          Length = 101

 Score =  130 bits (327), Expect = 1e-28
 Identities = 60/60 (100%), Positives = 60/60 (100%)
 Frame = -2

Query: 242 AAITIQEDTRNWKDKQTHPVDCRATSPTTQERDSLKSQGRGWPRGPTWRLGISAGNAKVA 63
           AAITIQEDTRNWKDKQTHPVDCRATSPTTQERDSLKSQGRGWPRGPTWRLGISAGNAKVA
Sbjct: 42  AAITIQEDTRNWKDKQTHPVDCRATSPTTQERDSLKSQGRGWPRGPTWRLGISAGNAKVA 101


>ref|XP_003588311.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477359|gb|AES58562.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 548

 Score =  125 bits (313), Expect = 5e-27
 Identities = 59/60 (98%), Positives = 59/60 (98%)
 Frame = -2

Query: 242 AAITIQEDTRNWKDKQTHPVDCRATSPTTQERDSLKSQGRGWPRGPTWRLGISAGNAKVA 63
           AAITIQEDTRN KDKQTHPVDCRATSPTTQERDSLKSQGRGWPRGPTWRLGISAGNAKVA
Sbjct: 489 AAITIQEDTRNRKDKQTHPVDCRATSPTTQERDSLKSQGRGWPRGPTWRLGISAGNAKVA 548