BLASTX nr result

ID: Coptis23_contig00030687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030687
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521322.1| protein with unknown function [Ricinus commu...   157   8e-37
ref|XP_004141702.1| PREDICTED: transcription initiation factor T...   154   9e-36
ref|NP_001236385.1| uncharacterized protein LOC100306277 [Glycin...   154   9e-36
ref|XP_002299587.1| predicted protein [Populus trichocarpa] gi|1...   153   2e-35
ref|NP_001235586.1| uncharacterized protein LOC100527659 [Glycin...   152   3e-35

>ref|XP_002521322.1| protein with unknown function [Ricinus communis]
           gi|223539400|gb|EEF40990.1| protein with unknown
           function [Ricinus communis]
          Length = 175

 Score =  157 bits (397), Expect = 8e-37
 Identities = 74/95 (77%), Positives = 86/95 (90%)
 Frame = -2

Query: 288 EGEENLPRVAKIMKSLLNSIGVQEYEPHVIHQFVELWYRFIVDALMDAQVYSEHAGKPIV 109
           EG+ENLPR AKI+KSLL S+GV++YEP VIHQF+ELWYR++VD L DAQVYSEHAGK  +
Sbjct: 3   EGDENLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKSAI 62

Query: 108 DCDDLKLAIQTKVNASFSQPPPQEVLLELARIRNK 4
           DCDD+KLAIQ+KVN SFSQPPP+EVLLELAR RNK
Sbjct: 63  DCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNK 97


>ref|XP_004141702.1| PREDICTED: transcription initiation factor TFIID subunit 9-like
           [Cucumis sativus] gi|449480520|ref|XP_004155919.1|
           PREDICTED: transcription initiation factor TFIID subunit
           9-like [Cucumis sativus]
          Length = 179

 Score =  154 bits (388), Expect = 9e-36
 Identities = 72/95 (75%), Positives = 85/95 (89%)
 Frame = -2

Query: 288 EGEENLPRVAKIMKSLLNSIGVQEYEPHVIHQFVELWYRFIVDALMDAQVYSEHAGKPIV 109
           EG+E LPR AKI+K+LL S+GV++YEP VIHQF+ELWYR++VD L DAQVYSEHAGK  +
Sbjct: 3   EGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAI 62

Query: 108 DCDDLKLAIQTKVNASFSQPPPQEVLLELARIRNK 4
           DCDD+KLAIQ+KVN SFSQPPP+EVLLELAR RNK
Sbjct: 63  DCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNK 97


>ref|NP_001236385.1| uncharacterized protein LOC100306277 [Glycine max]
           gi|255628079|gb|ACU14384.1| unknown [Glycine max]
          Length = 177

 Score =  154 bits (388), Expect = 9e-36
 Identities = 74/100 (74%), Positives = 88/100 (88%)
 Frame = -2

Query: 303 MADKEEGEENLPRVAKIMKSLLNSIGVQEYEPHVIHQFVELWYRFIVDALMDAQVYSEHA 124
           M DKEE E  +PR AKI+KSLL S+GV++YEP VIH+F+ELWYR++VD L DAQVYSEHA
Sbjct: 1   MGDKEE-ESAMPRDAKIVKSLLKSMGVEDYEPRVIHKFLELWYRYVVDVLTDAQVYSEHA 59

Query: 123 GKPIVDCDDLKLAIQTKVNASFSQPPPQEVLLELARIRNK 4
           GKP +DCDD+KLAIQ+KVN SFSQPPP+EVLLELA+ RNK
Sbjct: 60  GKPAIDCDDVKLAIQSKVNFSFSQPPPREVLLELAQNRNK 99


>ref|XP_002299587.1| predicted protein [Populus trichocarpa] gi|118484348|gb|ABK94051.1|
           unknown [Populus trichocarpa]
           gi|222846845|gb|EEE84392.1| predicted protein [Populus
           trichocarpa]
          Length = 175

 Score =  153 bits (386), Expect = 2e-35
 Identities = 71/95 (74%), Positives = 85/95 (89%)
 Frame = -2

Query: 288 EGEENLPRVAKIMKSLLNSIGVQEYEPHVIHQFVELWYRFIVDALMDAQVYSEHAGKPIV 109
           EGEE++PR AKI+KSLL S+GV++YEP V+HQF+ELWYR++VD L DAQVYSEHA K  +
Sbjct: 3   EGEEDMPRDAKIVKSLLKSMGVEDYEPRVVHQFLELWYRYVVDVLTDAQVYSEHANKTAI 62

Query: 108 DCDDLKLAIQTKVNASFSQPPPQEVLLELARIRNK 4
           DCDD+KLAIQ+KVN SFSQPPP+EVLLELAR RNK
Sbjct: 63  DCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNK 97


>ref|NP_001235586.1| uncharacterized protein LOC100527659 [Glycine max]
           gi|255632872|gb|ACU16789.1| unknown [Glycine max]
          Length = 174

 Score =  152 bits (384), Expect = 3e-35
 Identities = 74/100 (74%), Positives = 88/100 (88%)
 Frame = -2

Query: 303 MADKEEGEENLPRVAKIMKSLLNSIGVQEYEPHVIHQFVELWYRFIVDALMDAQVYSEHA 124
           MADKEE E  +PR AKI+KSLL S+GV++YEP VIH+F+ELWYR++VD L DAQVYSEHA
Sbjct: 1   MADKEE-ESAMPRDAKIVKSLLKSMGVEDYEPRVIHKFLELWYRYVVDVLTDAQVYSEHA 59

Query: 123 GKPIVDCDDLKLAIQTKVNASFSQPPPQEVLLELARIRNK 4
           GK  +DCDD+KLAIQ+KVN SFSQPPP+EVLLELA+ RNK
Sbjct: 60  GKSAIDCDDVKLAIQSKVNFSFSQPPPREVLLELAQNRNK 99


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