BLASTX nr result
ID: Coptis23_contig00030670
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00030670 (505 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vit... 68 7e-10 ref|XP_002318764.1| predicted protein [Populus trichocarpa] gi|2... 62 4e-08 gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis] 60 2e-07 ref|XP_002322296.1| predicted protein [Populus trichocarpa] gi|2... 55 5e-06 >ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera] gi|297734492|emb|CBI15739.3| unnamed protein product [Vitis vinifera] Length = 349 Score = 68.2 bits (165), Expect = 7e-10 Identities = 36/68 (52%), Positives = 45/68 (66%), Gaps = 3/68 (4%) Frame = +2 Query: 2 TAVADITTSFTSANGYPLVDSSVSHL-QQEQRPNAFCQESGNLLWSVDDQGPKFFNQTDF 178 TA AD TT+FT+ N YP++D+S S L Q QR N F Q++G+LLW VDDQ KF N + Sbjct: 281 TAYADTTTTFTATNNYPVMDTSASILFHQGQRLNVFSQDNGSLLWDVDDQRQKFINPSGL 340 Query: 179 --TTLCSF 196 LCSF Sbjct: 341 ISNNLCSF 348 >ref|XP_002318764.1| predicted protein [Populus trichocarpa] gi|222859437|gb|EEE96984.1| predicted protein [Populus trichocarpa] Length = 359 Score = 62.4 bits (150), Expect = 4e-08 Identities = 33/67 (49%), Positives = 45/67 (67%), Gaps = 2/67 (2%) Frame = +2 Query: 2 TAVADITTSFTSANGYPLVDSSVSHLQQEQRPNAF-CQESGNLLWSVDDQGPKFFNQTDF 178 T A TTSF +AN YPL+D+S S L Q RP+AF ++S NL+W VD++ KF + + Sbjct: 292 TTTATPTTSFATANNYPLIDNSTSLLLQGMRPSAFTTEDSCNLMWDVDERRQKFLSPSGL 351 Query: 179 TT-LCSF 196 T+ LCSF Sbjct: 352 TSNLCSF 358 >gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis] Length = 370 Score = 59.7 bits (143), Expect = 2e-07 Identities = 37/71 (52%), Positives = 49/71 (69%), Gaps = 6/71 (8%) Frame = +2 Query: 2 TAVADITTSFTSA---NGYPLVDSSVSHLQQEQRPNAFC-QESGN-LLWSVDDQGPKFFN 166 TA AD TT+F A N YP++D+++ LQQ QRPNA Q++GN LLW V+DQ +F N Sbjct: 300 TAFADTTTAFAPADHRNNYPVLDTALL-LQQGQRPNALIYQDNGNSLLWDVEDQKQRFLN 358 Query: 167 QTDFTT-LCSF 196 + FT+ LCSF Sbjct: 359 PSGFTSNLCSF 369 >ref|XP_002322296.1| predicted protein [Populus trichocarpa] gi|222869292|gb|EEF06423.1| predicted protein [Populus trichocarpa] Length = 357 Score = 55.5 bits (132), Expect = 5e-06 Identities = 31/68 (45%), Positives = 39/68 (57%), Gaps = 3/68 (4%) Frame = +2 Query: 2 TAVADITTSFTSANGYPLVDSSVSHLQQEQRPNAFC--QESGNLLWSVDDQGPKFFNQTD 175 TA A T T N YPL+D+S + Q RP+ F Q+SG L+W VD+Q KF N + Sbjct: 289 TASATTATFATEENNYPLIDNSATLFLQGMRPSDFTTHQDSGYLMWDVDEQRQKFLNPSG 348 Query: 176 F-TTLCSF 196 T LCSF Sbjct: 349 LATNLCSF 356