BLASTX nr result

ID: Coptis23_contig00030670 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030670
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vit...    68   7e-10
ref|XP_002318764.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]    60   2e-07
ref|XP_002322296.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06

>ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
           gi|297734492|emb|CBI15739.3| unnamed protein product
           [Vitis vinifera]
          Length = 349

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 36/68 (52%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
 Frame = +2

Query: 2   TAVADITTSFTSANGYPLVDSSVSHL-QQEQRPNAFCQESGNLLWSVDDQGPKFFNQTDF 178
           TA AD TT+FT+ N YP++D+S S L  Q QR N F Q++G+LLW VDDQ  KF N +  
Sbjct: 281 TAYADTTTTFTATNNYPVMDTSASILFHQGQRLNVFSQDNGSLLWDVDDQRQKFINPSGL 340

Query: 179 --TTLCSF 196
               LCSF
Sbjct: 341 ISNNLCSF 348


>ref|XP_002318764.1| predicted protein [Populus trichocarpa] gi|222859437|gb|EEE96984.1|
           predicted protein [Populus trichocarpa]
          Length = 359

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/67 (49%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
 Frame = +2

Query: 2   TAVADITTSFTSANGYPLVDSSVSHLQQEQRPNAF-CQESGNLLWSVDDQGPKFFNQTDF 178
           T  A  TTSF +AN YPL+D+S S L Q  RP+AF  ++S NL+W VD++  KF + +  
Sbjct: 292 TTTATPTTSFATANNYPLIDNSTSLLLQGMRPSAFTTEDSCNLMWDVDERRQKFLSPSGL 351

Query: 179 TT-LCSF 196
           T+ LCSF
Sbjct: 352 TSNLCSF 358


>gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]
          Length = 370

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 37/71 (52%), Positives = 49/71 (69%), Gaps = 6/71 (8%)
 Frame = +2

Query: 2   TAVADITTSFTSA---NGYPLVDSSVSHLQQEQRPNAFC-QESGN-LLWSVDDQGPKFFN 166
           TA AD TT+F  A   N YP++D+++  LQQ QRPNA   Q++GN LLW V+DQ  +F N
Sbjct: 300 TAFADTTTAFAPADHRNNYPVLDTALL-LQQGQRPNALIYQDNGNSLLWDVEDQKQRFLN 358

Query: 167 QTDFTT-LCSF 196
            + FT+ LCSF
Sbjct: 359 PSGFTSNLCSF 369


>ref|XP_002322296.1| predicted protein [Populus trichocarpa] gi|222869292|gb|EEF06423.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/68 (45%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
 Frame = +2

Query: 2   TAVADITTSFTSANGYPLVDSSVSHLQQEQRPNAFC--QESGNLLWSVDDQGPKFFNQTD 175
           TA A   T  T  N YPL+D+S +   Q  RP+ F   Q+SG L+W VD+Q  KF N + 
Sbjct: 289 TASATTATFATEENNYPLIDNSATLFLQGMRPSDFTTHQDSGYLMWDVDEQRQKFLNPSG 348

Query: 176 F-TTLCSF 196
             T LCSF
Sbjct: 349 LATNLCSF 356


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