BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030633
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              153   1e-35
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]   128   5e-28
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]   125   5e-27
emb|CAN64561.1| hypothetical protein VITISV_038232 [Vitis vinifera]   125   5e-27
gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]              123   1e-26

>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score =  153 bits (387), Expect = 1e-35
 Identities = 76/118 (64%), Positives = 92/118 (77%)
 Frame = +2

Query: 11   TGNSQSHISRLITSLGRLFSMKDLGSLNFFLGIEAVQDANGLYLTQSKYIMDLLPRTKFQ 190
            TGN+ SHIS LI +L  LFSMKDLGS+++FLGIE V + + L+LTQ KYI+DLL +TK  
Sbjct: 1074 TGNNSSHISHLIHNLNSLFSMKDLGSVHYFLGIETVYNGDHLHLTQHKYIVDLLKKTKLH 1133

Query: 191  DVKLISSPWQIGKKLSLYDGESLSDPSEYRSVVGALQYLKITCPDISFAVNQVCQFMH 364
            D +   +P   GKKLS+YDG  L DPSEYRS+VGALQYL +T PDI +AVNQVCQFMH
Sbjct: 1134 DSRPYPTPVLSGKKLSVYDGVKLEDPSEYRSIVGALQYLTLTRPDICYAVNQVCQFMH 1191


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score =  128 bits (321), Expect = 5e-28
 Identities = 62/119 (52%), Positives = 86/119 (72%)
 Frame = +2

Query: 11   TGNSQSHISRLITSLGRLFSMKDLGSLNFFLGIEAVQDANGLYLTQSKYIMDLLPRTKFQ 190
            TG+S + IS LI  L  +F+++DLG L+FFLGIE   +   + L+Q+KYI DLL RT+  
Sbjct: 1088 TGSSSTQISSLIAKLDSVFALRDLGQLSFFLGIEVSYNEGSMTLSQTKYISDLLHRTELF 1147

Query: 191  DVKLISSPWQIGKKLSLYDGESLSDPSEYRSVVGALQYLKITCPDISFAVNQVCQFMHQ 367
            D K  ++P  +GK LS +DG+ ++D + YRSVVGALQY+ +T PDI+FAVN+ CQFM Q
Sbjct: 1148 DTKPANTPGAVGKNLSKFDGDPMTDVTHYRSVVGALQYVTLTRPDIAFAVNKACQFMQQ 1206


>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
          Length = 1365

 Score =  125 bits (313), Expect = 5e-27
 Identities = 61/119 (51%), Positives = 83/119 (69%)
 Frame = +2

Query: 11   TGNSQSHISRLITSLGRLFSMKDLGSLNFFLGIEAVQDANGLYLTQSKYIMDLLPRTKFQ 190
            TG+S   I +LI  L  LF+++DLG L++FLGIE   D   ++L+QSKYI DLL RT   
Sbjct: 1031 TGSSPVLIQQLIHKLHSLFALRDLGQLSYFLGIEVTYDGGSMHLSQSKYITDLLQRTSML 1090

Query: 191  DVKLISSPWQIGKKLSLYDGESLSDPSEYRSVVGALQYLKITCPDISFAVNQVCQFMHQ 367
            D K  ++P  +G  LS +DG+ + D + YRSVVGALQY  +T PDI+F+VN+ CQFMH+
Sbjct: 1091 DSKAAATPGTVGLSLSQFDGDLMDDVTMYRSVVGALQYATLTRPDIAFSVNKACQFMHR 1149


>emb|CAN64561.1| hypothetical protein VITISV_038232 [Vitis vinifera]
          Length = 140

 Score =  125 bits (313), Expect = 5e-27
 Identities = 65/106 (61%), Positives = 77/106 (72%), Gaps = 2/106 (1%)
 Frame = +2

Query: 53  LGRLFSMKDLGSLNF--FLGIEAVQDANGLYLTQSKYIMDLLPRTKFQDVKLISSPWQIG 226
           LG  F+MKDLG ++F  FLGIEA + +  L LTQ+KY +DLL RT  QD K   +P   G
Sbjct: 29  LGTHFAMKDLGDIHFISFLGIEAKRTSTSLVLTQTKYTLDLLTRTHMQDSKPCPTPLASG 88

Query: 227 KKLSLYDGESLSDPSEYRSVVGALQYLKITCPDISFAVNQVCQFMH 364
            KLS YDG  LSD +EYRS+VGALQYL +T PDI +AVNQVCQFMH
Sbjct: 89  SKLSAYDGAPLSDATEYRSIVGALQYLTLTRPDICYAVNQVCQFMH 134


>gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]
          Length = 1534

 Score =  123 bits (309), Expect = 1e-26
 Identities = 61/119 (51%), Positives = 83/119 (69%)
 Frame = +2

Query: 11   TGNSQSHISRLITSLGRLFSMKDLGSLNFFLGIEAVQDANGLYLTQSKYIMDLLPRTKFQ 190
            TG+S + +   IT+L R FS+KD   L +FLGIEA + + GL+L Q KY+ DLL R K  
Sbjct: 1225 TGSSDALVMAFITALSRRFSLKDPTDLVYFLGIEATRTSQGLHLMQHKYVYDLLSRMKML 1284

Query: 191  DVKLISSPWQIGKKLSLYDGESLSDPSEYRSVVGALQYLKITCPDISFAVNQVCQFMHQ 367
            D K +S+P     KLSLY G +L +P EYR+V+G+LQYL  T PDI++AVN++ QFMH+
Sbjct: 1285 DAKPVSTPMATHPKLSLYSGIALDEPGEYRTVIGSLQYLAFTRPDIAYAVNRLSQFMHR 1343