BLASTX nr result
ID: Coptis23_contig00030629
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00030629
(525 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI20844.3| unnamed protein product [Vitis vinifera] 183 2e-44
ref|XP_002867987.1| binding protein [Arabidopsis lyrata subsp. l... 117 1e-24
ref|XP_002284293.1| PREDICTED: pentatricopeptide repeat-containi... 114 7e-24
ref|XP_002513855.1| pentatricopeptide repeat-containing protein,... 114 9e-24
ref|XP_002523781.1| pentatricopeptide repeat-containing protein,... 113 2e-23
>emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 183 bits (464), Expect = 2e-44
Identities = 93/173 (53%), Positives = 117/173 (67%)
Frame = -2
Query: 521 NVVLWTSIICSKAKKGLNNLALNDFLQMQRVGVEPNEIILSIILGVCGRLQIIHIDVGRN 342
NVV WTS I A++GL + AL+ FLQM R G+EPN I S + C Q + +
Sbjct: 5 NVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACA--QSTRPSLATS 62
Query: 341 LHCLILKKGLFRHCFLASGLITFYSKFDFIYESRKVFDEMLERDAVSWNSMIAAYSRNGL 162
LHCLILKKG F++SGLI+ YSK D I E+R +FD+M ERD VSWNSMIA YS+ GL
Sbjct: 63 LHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGL 122
Query: 161 NEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKACAGFGCVKIGKSVHGCAVKM 3
NEEA LF ++N +WKL+ +DFT A++ KAC G GC +IGK VHG AVK+
Sbjct: 123 NEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKI 175
Score = 87.0 bits (214), Expect = 1e-15
Identities = 53/171 (30%), Positives = 88/171 (51%)
Frame = -2
Query: 521 NVVLWTSIICSKAKKGLNNLALNDFLQMQRVGVEPNEIILSIILGVCGRLQIIHIDVGRN 342
N V W II A+ G AL F +M++ + +E S ++ + + GR+
Sbjct: 413 NSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAV--EQGRH 470
Query: 341 LHCLILKKGLFRHCFLASGLITFYSKFDFIYESRKVFDEMLERDAVSWNSMIAAYSRNGL 162
LH ++K GL ++ S +I YSK + +++KVF M E++ VSWNSMI Y++NG
Sbjct: 471 LHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGF 530
Query: 161 NEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKACAGFGCVKIGKSVHGCAV 9
+EA+ LF + + ++ TF I AC+ G V+ G++ + V
Sbjct: 531 CKEALLLFQEMTSS----GILPTAVTFVGILFACSHAGLVEEGRNFYNLMV 577
Score = 85.1 bits (209), Expect = 6e-15
Identities = 54/172 (31%), Positives = 86/172 (50%)
Frame = -2
Query: 521 NVVLWTSIICSKAKKGLNNLALNDFLQMQRVGVEPNEIILSIILGVCGRLQIIHIDVGRN 342
++V W ++I A+ A+ F QM+ G +PN+ +L + VGR
Sbjct: 211 DIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMS--DSAVGRC 268
Query: 341 LHCLILKKGLFRHCFLASGLITFYSKFDFIYESRKVFDEMLERDAVSWNSMIAAYSRNGL 162
H +LK G F+A+ L+ YSKF I + + F EM +R+ VS+N++I YS G
Sbjct: 269 FHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMGK 328
Query: 161 NEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKACAGFGCVKIGKSVHGCAVK 6
EEA+ ++S L + + + FTF +F +C+ V G VH +VK
Sbjct: 329 YEEALRVYSQLQSE----GMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVK 376
Score = 70.5 bits (171), Expect = 1e-10
Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 4/175 (2%)
Frame = -2
Query: 515 VLWTSIICSKAKKGLNNLALNDFLQM----QRVGVEPNEIILSIILGVCGRLQIIHIDVG 348
V W S+I +++GLN A F M + + ++ L+ +L CG L I G
Sbjct: 108 VSWNSMIAGYSQRGLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRI--G 165
Query: 347 RNLHCLILKKGLFRHCFLASGLITFYSKFDFIYESRKVFDEMLERDAVSWNSMIAAYSRN 168
+ +H +K G F++ + Y K + + FD++ +D V+WN+MI Y++N
Sbjct: 166 KCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQN 225
Query: 167 GLNEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKACAGFGCVKIGKSVHGCAVKM 3
EEA+ LF + +K ND TF + KA +G+ H +K+
Sbjct: 226 CYEEEAIELFYQM--ELEGFK--PNDTTFCCVLKASTAMSDSAVGRCFHAKVLKL 276
Score = 63.5 bits (153), Expect = 2e-08
Identities = 41/172 (23%), Positives = 85/172 (49%)
Frame = -2
Query: 521 NVVLWTSIICSKAKKGLNNLALNDFLQMQRVGVEPNEIILSIILGVCGRLQIIHIDVGRN 342
N+V + ++I + G AL + Q+Q G+EP+ + C + G
Sbjct: 312 NLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVA--EGAQ 369
Query: 341 LHCLILKKGLFRHCFLASGLITFYSKFDFIYESRKVFDEMLERDAVSWNSMIAAYSRNGL 162
+H +K GL + + ++ FYSK F + + F+ + ++V W +I+ +++NG
Sbjct: 370 VHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFAQNGE 429
Query: 161 NEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKACAGFGCVKIGKSVHGCAVK 6
E+A+ F + ++ D T++F+ +S+ KA + + V+ G+ +H +K
Sbjct: 430 GEKALMQF-CKMRKFID---KTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMK 477
>ref|XP_002867987.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297313823|gb|EFH44246.1| binding protein [Arabidopsis
lyrata subsp. lyrata]
Length = 616
Score = 117 bits (292), Expect = 1e-24
Identities = 63/172 (36%), Positives = 99/172 (57%)
Frame = -2
Query: 521 NVVLWTSIICSKAKKGLNNLALNDFLQMQRVGVEPNEIILSIILGVCGRLQIIHIDVGRN 342
+V+ WT++I + ++KG N A+ F+ M G PNE + IL C + I GR
Sbjct: 248 DVISWTAVISACSRKGHGNKAIFMFIGMLNHGFLPNEFTVCSILKACSEEKAIRF--GRQ 305
Query: 341 LHCLILKKGLFRHCFLASGLITFYSKFDFIYESRKVFDEMLERDAVSWNSMIAAYSRNGL 162
+H L++K+ + F+ + L+ Y+K I + RKVFD M R+ V+W S+IAA++R G
Sbjct: 306 VHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGF 365
Query: 161 NEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKACAGFGCVKIGKSVHGCAVK 6
EEA+SLF V+ R+ L+ N+ T SI +AC G + +GK +H +K
Sbjct: 366 GEEAISLFRVMKRRH----LIANNLTVVSILRACGSVGALLLGKELHAQIIK 413
Score = 89.4 bits (220), Expect = 3e-16
Identities = 53/172 (30%), Positives = 88/172 (51%)
Frame = -2
Query: 521 NVVLWTSIICSKAKKGLNNLALNDFLQMQRVGVEPNEIILSIILGVCGRLQIIHIDVGRN 342
N V WTSII + A++G A++ F M+R + N + + IL CG + + + G+
Sbjct: 349 NTVTWTSIIAAHAREGFGEEAISLFRVMKRRHLIANNLTVVSILRACGSVGALLL--GKE 406
Query: 341 LHCLILKKGLFRHCFLASGLITFYSKFDFIYESRKVFDEMLERDAVSWNSMIAAYSRNGL 162
LH I+K + ++ ++ S L+ Y K ++ V ++ RD VSW +MI+ S G
Sbjct: 407 LHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGH 466
Query: 161 NEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKACAGFGCVKIGKSVHGCAVK 6
EA+ ++ + N FT++S KACA + IG+S+H A K
Sbjct: 467 ESEALDFLKEMIQE----GVEPNPFTYSSALKACANSESLLIGRSIHSIAKK 514
Score = 89.0 bits (219), Expect = 4e-16
Identities = 53/154 (34%), Positives = 81/154 (52%)
Frame = -2
Query: 521 NVVLWTSIICSKAKKGLNNLALNDFLQMQRVGVEPNEIILSIILGVCGRLQIIHIDVGRN 342
+VV WT++I + G + AL+ +M + GVEPN S L C + + I GR+
Sbjct: 450 DVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLI--GRS 507
Query: 341 LHCLILKKGLFRHCFLASGLITFYSKFDFIYESRKVFDEMLERDAVSWNSMIAAYSRNGL 162
+H + K + F+ S LI Y+K F+ E+ +VFD M E++ VSW +MI Y+RNG
Sbjct: 508 IHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGF 567
Query: 161 NEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKAC 60
EA+ L+ R +D+ FA+I C
Sbjct: 568 CREALK----LMYRMEAEGFEVDDYIFATILSTC 597
Score = 88.2 bits (217), Expect = 7e-16
Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 1/173 (0%)
Frame = -2
Query: 521 NVVLWTSIICSKAKKGLNNLALNDFLQMQRVGVE-PNEIILSIILGVCGRLQIIHIDVGR 345
N V WT++I K GL + A + F + G+ NE + +L +C R ++GR
Sbjct: 147 NTVTWTAMIDGYLKFGLEDEAFSLFEDYVKHGIRFTNERMFVCLLNLCSRRS--EFELGR 204
Query: 344 NLHCLILKKGLFRHCFLASGLITFYSKFDFIYESRKVFDEMLERDAVSWNSMIAAYSRNG 165
+H ++K G+ + + S L+ FY++ + + + FD M E+D +SW ++I+A SR G
Sbjct: 205 QVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKG 263
Query: 164 LNEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKACAGFGCVKIGKSVHGCAVK 6
+A+ +F +LN + N+FT SI KAC+ ++ G+ VH VK
Sbjct: 264 HGNKAIFMFIGMLNH----GFLPNEFTVCSILKACSEEKAIRFGRQVHSLVVK 312
Score = 56.6 bits (135), Expect = 2e-06
Identities = 34/115 (29%), Positives = 58/115 (50%)
Frame = -2
Query: 347 RNLHCLILKKGLFRHCFLASGLITFYSKFDFIYESRKVFDEMLERDAVSWNSMIAAYSRN 168
+ +H + LK + + + LI+ + + +RKVFD M +R+ V+W +MI Y +
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPDRNTVTWTAMIDGYLKF 161
Query: 167 GLNEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKACAGFGCVKIGKSVHGCAVKM 3
GL +EA SLF + TN+ F + C+ ++G+ VHG VK+
Sbjct: 162 GLEDEAFSLFE---DYVKHGIRFTNERMFVCLLNLCSRRSEFELGRQVHGNMVKV 213
>ref|XP_002284293.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18520-like [Vitis vinifera]
Length = 595
Score = 114 bits (286), Expect = 7e-24
Identities = 65/172 (37%), Positives = 98/172 (56%)
Frame = -2
Query: 521 NVVLWTSIICSKAKKGLNNLALNDFLQMQRVGVEPNEIILSIILGVCGRLQIIHIDVGRN 342
+VV WT++I + +++G AL+ F QM PNE + +L CG + + + G+
Sbjct: 228 DVVCWTTMITACSQQGRGTEALSMFSQMMFNTSSPNEFTVCSVLKACGEEKAL--EFGKQ 285
Query: 341 LHCLILKKGLFRHCFLASGLITFYSKFDFIYESRKVFDEMLERDAVSWNSMIAAYSRNGL 162
LH I+KK F+ + L+ Y+K I +SRKVFD M +R+ V+W S+IA Y+RNG
Sbjct: 286 LHGAIIKKMFKEDVFIGTSLVGMYAKCGEILDSRKVFDGMKKRNTVTWTSIIAGYARNGQ 345
Query: 161 NEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKACAGFGCVKIGKSVHGCAVK 6
EEA+SLF V+ R K+ N+ T SI +AC + +GK VH +K
Sbjct: 346 GEEAISLFRVMKRR----KIFANNLTVVSILRACGSTRNLLMGKEVHAQIMK 393
Score = 93.2 bits (230), Expect = 2e-17
Identities = 54/172 (31%), Positives = 91/172 (52%)
Frame = -2
Query: 521 NVVLWTSIICSKAKKGLNNLALNDFLQMQRVGVEPNEIILSIILGVCGRLQIIHIDVGRN 342
NVV WT+++ ++ G ++ AL F GV N +L +C + + ++GR
Sbjct: 128 NVVSWTAVVNGYSRYGFDDEALRLFDDCIENGVRANGKTFVCVLNLCSKR--LDFELGRQ 185
Query: 341 LHCLILKKGLFRHCFLASGLITFYSKFDFIYESRKVFDEMLERDAVSWNSMIAAYSRNGL 162
+H I+K +R+ + S L+ FY++ + + FD+M ERD V W +MI A S+ G
Sbjct: 186 IHACIVKDN-WRNLIVDSALVCFYAQCGDLSGAFHAFDQMPERDVVCWTTMITACSQQGR 244
Query: 161 NEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKACAGFGCVKIGKSVHGCAVK 6
EA+S+FS ++ + N+FT S+ KAC ++ GK +HG +K
Sbjct: 245 GTEALSMFSQMMFNTSS----PNEFTVCSVLKACGEEKALEFGKQLHGAIIK 292
Score = 85.5 bits (210), Expect = 4e-15
Identities = 53/172 (30%), Positives = 85/172 (49%)
Frame = -2
Query: 521 NVVLWTSIICSKAKKGLNNLALNDFLQMQRVGVEPNEIILSIILGVCGRLQIIHIDVGRN 342
N V WTSII A+ G A++ F M+R + N + + IL CG + ++ +G+
Sbjct: 329 NTVTWTSIIAGYARNGQGEEAISLFRVMKRRKIFANNLTVVSILRACGSTR--NLLMGKE 386
Query: 341 LHCLILKKGLFRHCFLASGLITFYSKFDFIYESRKVFDEMLERDAVSWNSMIAAYSRNGL 162
+H I+K + + ++ S L+ FY K + + KV M RD VSW ++I+ Y+ G
Sbjct: 387 VHAQIMKNSMQSNIYIGSTLVWFYCKCEEHPFASKVLQNMPLRDVVSWTAIISGYTSLGH 446
Query: 161 NEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKACAGFGCVKIGKSVHGCAVK 6
EA+ +L + N FT++S KACA + GK +H K
Sbjct: 447 EPEALEFLKEMLEE----GVEPNPFTYSSALKACAHLEAILQGKLIHSSVNK 494
Score = 84.0 bits (206), Expect = 1e-14
Identities = 52/154 (33%), Positives = 77/154 (50%)
Frame = -2
Query: 521 NVVLWTSIICSKAKKGLNNLALNDFLQMQRVGVEPNEIILSIILGVCGRLQIIHIDVGRN 342
+VV WT+II G AL +M GVEPN S L C L+ I G+
Sbjct: 430 DVVSWTAIISGYTSLGHEPEALEFLKEMLEEGVEPNPFTYSSALKACAHLEAIL--QGKL 487
Query: 341 LHCLILKKGLFRHCFLASGLITFYSKFDFIYESRKVFDEMLERDAVSWNSMIAAYSRNGL 162
+H + K + F+ S LI Y+K ++ E+ +VFD M +R+ VSW +MI Y+RNGL
Sbjct: 488 IHSSVNKTLALSNVFVGSALINMYAKCGYVSEAIQVFDSMPQRNLVSWKAMIVGYARNGL 547
Query: 161 NEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKAC 60
EA+ L+ R + +D+ ++ AC
Sbjct: 548 CGEALK----LMYRMQAEGIEVDDYILTTVLSAC 577
Score = 72.8 bits (177), Expect = 3e-11
Identities = 44/148 (29%), Positives = 77/148 (52%)
Frame = -2
Query: 449 FLQMQRVGVEPNEIILSIILGVCGRLQIIHIDVGRNLHCLILKKGLFRHCFLASGLITFY 270
FL +Q + N +L+ L C ++ + R +H ++ K ++ + LI+ Y
Sbjct: 54 FLNVQPIVGHVNANLLAFWLQSCCTVREV-----RRVHAVVFKCLDNSVTYVNNNLISAY 108
Query: 269 SKFDFIYESRKVFDEMLERDAVSWNSMIAAYSRNGLNEEAVSLFSVLLNRYNDWKLMTND 90
S+F + E+RKVFD+M ER+ VSW +++ YSR G ++EA+ LF + + N
Sbjct: 109 SRFGKLVEARKVFDKMPERNVVSWTAVVNGYSRYGFDDEALRLFDDCIEN----GVRANG 164
Query: 89 FTFASIFKACAGFGCVKIGKSVHGCAVK 6
TF + C+ ++G+ +H C VK
Sbjct: 165 KTFVCVLNLCSKRLDFELGRQIHACIVK 192
>ref|XP_002513855.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223546941|gb|EEF48438.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 498
Score = 114 bits (285), Expect = 9e-24
Identities = 62/172 (36%), Positives = 95/172 (55%)
Frame = -2
Query: 521 NVVLWTSIICSKAKKGLNNLALNDFLQMQRVGVEPNEIILSIILGVCGRLQIIHIDVGRN 342
+VV WTS+I + +++G A F QM G PNE + IL CG + + GR
Sbjct: 131 DVVCWTSVISACSQQGRGEEAFRMFSQMLGEGFLPNEFTVCAILKACGEKKALKF--GRQ 188
Query: 341 LHCLILKKGLFRHCFLASGLITFYSKFDFIYESRKVFDEMLERDAVSWNSMIAAYSRNGL 162
LHC I+K F+ + L+ Y+K + +S++VFD M +R+ V+W S+IA Y+R GL
Sbjct: 189 LHCAIVKGMYKDDVFIGTSLVDMYAKCGEMIDSKEVFDGMRKRNTVTWTSIIAGYARKGL 248
Query: 161 NEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKACAGFGCVKIGKSVHGCAVK 6
EEA+ LF V+ R K+++N+ T S+ +AC G+ VH +K
Sbjct: 249 GEEAIRLFRVMKRR----KIISNNLTVVSVLRACGSISASLTGREVHAQIIK 296
Score = 94.7 bits (234), Expect = 7e-18
Identities = 59/172 (34%), Positives = 86/172 (50%)
Frame = -2
Query: 521 NVVLWTSIICSKAKKGLNNLALNDFLQMQRVGVEPNEIILSIILGVCGRLQIIHIDVGRN 342
N V WTSII A+KGL A+ F M+R + N + + +L CG + GR
Sbjct: 232 NTVTWTSIIAGYARKGLGEEAIRLFRVMKRRKIISNNLTVVSVLRACGSISASL--TGRE 289
Query: 341 LHCLILKKGLFRHCFLASGLITFYSKFDFIYESRKVFDEMLERDAVSWNSMIAAYSRNGL 162
+H I+K G+ + +L S L+ FY K + KV +M R+ VSW +MI+ Y G
Sbjct: 290 VHAQIIKSGIQSNVYLGSTLVWFYCKCGEFNIASKVLQQMSFRNVVSWTAMISGYIGLGY 349
Query: 161 NEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKACAGFGCVKIGKSVHGCAVK 6
EA+ ++ D + N+FT++S KACA V GK +H A K
Sbjct: 350 EFEALEFLKEMM----DEGVEPNEFTYSSALKACANLESVLQGKLIHSFANK 397
Score = 89.0 bits (219), Expect = 4e-16
Identities = 54/171 (31%), Positives = 91/171 (53%)
Frame = -2
Query: 518 VVLWTSIICSKAKKGLNNLALNDFLQMQRVGVEPNEIILSIILGVCGRLQIIHIDVGRNL 339
VV WT++I GL++ AL F ++ GV N IL VC + + ++GR +
Sbjct: 32 VVSWTAMINGYVSFGLDDEALRLFSELIENGVTANNRTFVCILNVCSKR--LDFELGRQI 89
Query: 338 HCLILKKGLFRHCFLASGLITFYSKFDFIYESRKVFDEMLERDAVSWNSMIAAYSRNGLN 159
H ++K G +R+ + S +++FY++ + + F ++ E+D V W S+I+A S+ G
Sbjct: 90 HACVVK-GNWRNLIVDSAIVSFYAQCGDLESAFCAFFQVREKDVVCWTSVISACSQQGRG 148
Query: 158 EEAVSLFSVLLNRYNDWKLMTNDFTFASIFKACAGFGCVKIGKSVHGCAVK 6
EEA +FS +L + N+FT +I KAC +K G+ +H VK
Sbjct: 149 EEAFRMFSQMLGE----GFLPNEFTVCAILKACGEKKALKFGRQLHCAIVK 195
Score = 85.9 bits (211), Expect = 3e-15
Identities = 52/154 (33%), Positives = 80/154 (51%)
Frame = -2
Query: 521 NVVLWTSIICSKAKKGLNNLALNDFLQMQRVGVEPNEIILSIILGVCGRLQIIHIDVGRN 342
NVV WT++I G AL +M GVEPNE S L C L+ + G+
Sbjct: 333 NVVSWTAMISGYIGLGYEFEALEFLKEMMDEGVEPNEFTYSSALKACANLESVL--QGKL 390
Query: 341 LHCLILKKGLFRHCFLASGLITFYSKFDFIYESRKVFDEMLERDAVSWNSMIAAYSRNGL 162
+H K + ++ S LI YSK ++ ++ +VFD M ER+ +SW +MI +Y+RNGL
Sbjct: 391 IHSFANKTPASSNVYVGSALIYMYSKCGYLSDAIQVFDSMPERNLISWKTMILSYARNGL 450
Query: 161 NEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKAC 60
EA+ L+ R + +D+ +AS+ +C
Sbjct: 451 CREALK----LMYRMQAEGIEVDDYIYASVMGSC 480
Score = 68.9 bits (167), Expect = 4e-10
Identities = 36/98 (36%), Positives = 57/98 (58%)
Frame = -2
Query: 299 FLASGLITFYSKFDFIYESRKVFDEMLERDAVSWNSMIAAYSRNGLNEEAVSLFSVLLNR 120
++ + LI+ Y++ + E+RKVFD+M ER VSW +MI Y GL++EA+ LFS L+
Sbjct: 2 YVDNNLISVYARLGELIEARKVFDQMHERCVVSWTAMINGYVSFGLDDEALRLFSELIEN 61
Query: 119 YNDWKLMTNDFTFASIFKACAGFGCVKIGKSVHGCAVK 6
+ N+ TF I C+ ++G+ +H C VK
Sbjct: 62 ----GVTANNRTFVCILNVCSKRLDFELGRQIHACVVK 95
>ref|XP_002523781.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536869|gb|EEF38507.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 661
Score = 113 bits (282), Expect = 2e-23
Identities = 64/172 (37%), Positives = 94/172 (54%)
Frame = -2
Query: 521 NVVLWTSIICSKAKKGLNNLALNDFLQMQRVGVEPNEIILSIILGVCGRLQIIHIDVGRN 342
NVV WTS++ A GLN AL F +MQ ++PN + +LG + I D G
Sbjct: 161 NVVSWTSLLVGYAHNGLNMEALECFFEMQAGAIKPNPFTFATVLGALADSKAI-ADKGVQ 219
Query: 341 LHCLILKKGLFRHCFLASGLITFYSKFDFIYESRKVFDEMLERDAVSWNSMIAAYSRNGL 162
+H +++K G F+ + LI YSK + ++ VFD M+ RDA+SWNSM+A Y NGL
Sbjct: 220 IHTMVIKNGFEATIFVCNSLINMYSKSGMVKNAKAVFDNMVTRDAISWNSMVAGYVANGL 279
Query: 161 NEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKACAGFGCVKIGKSVHGCAVK 6
EA+ +F L R KL +F F+S+ K+CA + + +HG +K
Sbjct: 280 YLEAIEMFYHL--RLAGVKL--TNFIFSSVIKSCANIKELGFARQLHGQVLK 327
Score = 85.9 bits (211), Expect = 3e-15
Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 1/173 (0%)
Frame = -2
Query: 521 NVVLWTSIICSKAKKGLNNLALNDFLQMQRVGVEPNEIILSIILGVCGRLQIIHIDVGRN 342
NVV WT+II + GL A+N F +M R GV PN+ S IL + +
Sbjct: 365 NVVSWTAIISGHLQNGLAEQAVNLFCEMSREGVRPNDYTFSTILAAQPVVSPFEV----- 419
Query: 341 LHCLILKKGLFRHCFLASGLITFYSKFDFIYESRKVFDEMLERDAVSWNSMIAAYSRNGL 162
H ++K + + + L+ Y K + E+ KVF+ + ++D V+W++M+A Y++ G
Sbjct: 420 -HAQVIKSDYEKSPSVGTALLDAYVKLGNLNEASKVFERIDDKDIVAWSAMVAGYAQTGD 478
Query: 161 NEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKAC-AGFGCVKIGKSVHGCAVK 6
E AV + + + + N++TF+S+ AC A V+ GK H ++K
Sbjct: 479 TEGAVKILIQMAKK----GVEPNEYTFSSVINACTAPTAAVEQGKQFHAWSIK 527
Score = 80.5 bits (197), Expect = 1e-13
Identities = 46/160 (28%), Positives = 79/160 (49%)
Frame = -2
Query: 521 NVVLWTSIICSKAKKGLNNLALNDFLQMQRVGVEPNEIILSIILGVCGRLQIIHIDVGRN 342
++V W++++ A+ G A+ +QM + GVEPNE S ++ C ++ G+
Sbjct: 462 DIVAWSAMVAGYAQTGDTEGAVKILIQMAKKGVEPNEYTFSSVINAC-TAPTAAVEQGKQ 520
Query: 341 LHCLILKKGLFRHCFLASGLITFYSKFDFIYESRKVFDEMLERDAVSWNSMIAAYSRNGL 162
H +K ++S L+T Y+K I + +VF RD VSWNSM++ Y+++G
Sbjct: 521 FHAWSIKSRFNDALCVSSALVTMYAKRGEIESANEVFRRQGVRDLVSWNSMVSGYAQHGH 580
Query: 161 NEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKACAGFGCV 42
+A+ +F + D L + TF + AC G V
Sbjct: 581 ARKALEVFKEM----QDQNLELDGVTFIGVISACTHAGLV 616
Score = 73.6 bits (179), Expect = 2e-11
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 1/173 (0%)
Frame = -2
Query: 521 NVVLWTSIICSKAKKGLNNLALNDFLQMQRVGVEPNEIILSIILGVCGRLQIIHIDVGRN 342
+VV ++ ++ ++ +N F+ + R + + LS +L C L G
Sbjct: 60 DVVQCNHLLFDYSRNNSHHEVVNLFVAIHRSDLLTDGSTLSCVLKACACLSCKKF--GIQ 117
Query: 341 LHCLILKKGLFRHCFLASGLITFYSKFDFIYESRKVFDEMLERDAVSWNSMIAAYSRNGL 162
+H +K G + + L+ Y K +++ E ++VFDEM ER+ VSW S++ Y+ NGL
Sbjct: 118 VHDYCVKSGFLEDISVGTSLVDMYMKSEYVEEGKRVFDEMEERNVVSWTSLLVGYAHNGL 177
Query: 161 NEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKACAGFGCV-KIGKSVHGCAVK 6
N EA+ F + + N FTFA++ A A + G +H +K
Sbjct: 178 NMEALECFFEM----QAGAIKPNPFTFATVLGALADSKAIADKGVQIHTMVIK 226
Score = 65.9 bits (159), Expect = 3e-09
Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 1/154 (0%)
Frame = -2
Query: 521 NVVLWTSIICSKAKKGLNNLALNDFLQMQRVGVEPNEIILSIILGVCGRLQIIHIDVGRN 342
+ + W S++ GL A+ F ++ GV+ I S ++ C ++ + R
Sbjct: 263 DAISWNSMVAGYVANGLYLEAIEMFYHLRLAGVKLTNFIFSSVIKSCANIK--ELGFARQ 320
Query: 341 LHCLILKKGLFRHCFLASGLITFYSKFDFIYESRKVFDEMLE-RDAVSWNSMIAAYSRNG 165
LH +LK G + + L+ Y+K I ++ K+F M R+ VSW ++I+ + +NG
Sbjct: 321 LHGQVLKGGFEYDHNIRTALMVAYNKGREIDDAFKIFSMMYGIRNVVSWTAIISGHLQNG 380
Query: 164 LNEEAVSLFSVLLNRYNDWKLMTNDFTFASIFKA 63
L E+AV+LF + + ND+TF++I A
Sbjct: 381 LAEQAVNLFCEMSRE----GVRPNDYTFSTILAA 410