BLASTX nr result

ID: Coptis23_contig00030620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030620
         (1188 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137075.1| PREDICTED: uncharacterized protein LOC101209...   253   7e-65
ref|XP_002263300.2| PREDICTED: uncharacterized protein LOC100259...   250   6e-64
ref|XP_002518329.1| conserved hypothetical protein [Ricinus comm...   247   4e-63
ref|XP_003532586.1| PREDICTED: uncharacterized protein LOC100778...   243   7e-62
ref|XP_002300315.1| predicted protein [Populus trichocarpa] gi|2...   236   1e-59

>ref|XP_004137075.1| PREDICTED: uncharacterized protein LOC101209755 [Cucumis sativus]
            gi|449511267|ref|XP_004163910.1| PREDICTED:
            uncharacterized protein LOC101231614 [Cucumis sativus]
          Length = 365

 Score =  253 bits (646), Expect = 7e-65
 Identities = 120/193 (62%), Positives = 154/193 (79%)
 Frame = -1

Query: 1188 GEGLSLVNCEDKDRLEMVLKYIEDGDLRKWSLPDIKAFNVGLNEMRPQLNCITNAYMFDQ 1009
            G    L+  +D+ R+EMVLKYIEDGDLR+W+LPDI+AFN+GL+E R +LNCITN YM++Q
Sbjct: 173  GPVADLLELKDRSRIEMVLKYIEDGDLRRWNLPDIRAFNIGLSEWRSKLNCITNPYMYEQ 232

Query: 1008 LLEVNHMDLITRGNTYIHSCQDAVNKLLDRAFKLRLGKGFYGECLGIRADGNSHLSNDLG 829
            LLE+N ++LI +G  +I S ++A NK+LD++FK+RLG+G YGECL +RADGNS+LS+++G
Sbjct: 233  LLEMNSLELIAKGTDFIASRENAANKILDKSFKIRLGRGLYGECLAVRADGNSNLSDEIG 292

Query: 828  RELSLRSAEAGLRPIGAVIYMQRRNLKMCLRSTDDNTDTSEVXXXXXXXXXXXXXSFIIR 649
            ++LS+RS  AGLRPIGAVIYMQR NLKMCLR+TDD TDTSEV             SF+IR
Sbjct: 293  KQLSMRSVAAGLRPIGAVIYMQRNNLKMCLRTTDDATDTSEVSKAYGGGGSPRSSSFMIR 352

Query: 648  MDEYNQWTPVNSS 610
            MDEYN W  VNSS
Sbjct: 353  MDEYNAWRLVNSS 365


>ref|XP_002263300.2| PREDICTED: uncharacterized protein LOC100259417 [Vitis vinifera]
            gi|296088077|emb|CBI35436.3| unnamed protein product
            [Vitis vinifera]
          Length = 367

 Score =  250 bits (638), Expect = 6e-64
 Identities = 124/195 (63%), Positives = 153/195 (78%), Gaps = 2/195 (1%)
 Frame = -1

Query: 1188 GEGLSLVNCEDKDRLEMVLKYIEDGDLRKWSLPDIKAFNVGLNEMRPQLNCITNAYMFDQ 1009
            GE   L+N ED+DR+EMVLKYIEDGDL +W LPDIKAFN+GL+  R + N ITN  M++Q
Sbjct: 173  GEAEGLLNPEDRDRIEMVLKYIEDGDLCRWKLPDIKAFNIGLSGWRSKFNSITNPCMYEQ 232

Query: 1008 LLEVNHMDLITRGNTYIHSCQDAVNKLL--DRAFKLRLGKGFYGECLGIRADGNSHLSND 835
            LLE++ +DLI++GN+YI SCQ A + LL  ++ FK+RLG+GFYGECLG+RADGNS+L+++
Sbjct: 233  LLEISAVDLISKGNSYISSCQHAASNLLKLNKVFKVRLGRGFYGECLGVRADGNSNLTDE 292

Query: 834  LGRELSLRSAEAGLRPIGAVIYMQRRNLKMCLRSTDDNTDTSEVXXXXXXXXXXXXXSFI 655
            +G++LS +SA AGLRPIGAV YMQR NLKMCLRSTD  TDTSEV             SFI
Sbjct: 293  IGKQLSQKSAAAGLRPIGAVTYMQRNNLKMCLRSTDSATDTSEVAKAYGGGGSPSSSSFI 352

Query: 654  IRMDEYNQWTPVNSS 610
            IRMDEYNQW  VNSS
Sbjct: 353  IRMDEYNQWLSVNSS 367


>ref|XP_002518329.1| conserved hypothetical protein [Ricinus communis]
            gi|223542549|gb|EEF44089.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 369

 Score =  247 bits (631), Expect = 4e-63
 Identities = 116/182 (63%), Positives = 152/182 (83%)
 Frame = -1

Query: 1173 LVNCEDKDRLEMVLKYIEDGDLRKWSLPDIKAFNVGLNEMRPQLNCITNAYMFDQLLEVN 994
            L+N ED+DR+EMVLKY+ED D+R+WSLPDI+AF+VGL+E R +LNCITN ++F++LLE++
Sbjct: 182  LLNPEDQDRVEMVLKYVEDVDIRRWSLPDIRAFSVGLSEWRSKLNCITNPFIFEELLEIS 241

Query: 993  HMDLITRGNTYIHSCQDAVNKLLDRAFKLRLGKGFYGECLGIRADGNSHLSNDLGRELSL 814
               LI +GN+YI S Q A +KLL++ FK+RLG+G YGECLG+RADGNS+LS+++GR+LS+
Sbjct: 242  STSLIAKGNSYISSRQSAASKLLEKVFKVRLGRGLYGECLGVRADGNSNLSDEIGRQLSV 301

Query: 813  RSAEAGLRPIGAVIYMQRRNLKMCLRSTDDNTDTSEVXXXXXXXXXXXXXSFIIRMDEYN 634
            +SAEAGLRP+GAV+Y+QR NLKMCLRSTD+ TDTSEV             SFIIRMDEYN
Sbjct: 302  KSAEAGLRPMGAVVYLQRNNLKMCLRSTDNATDTSEVAKAYGGGGSRSSSSFIIRMDEYN 361

Query: 633  QW 628
            +W
Sbjct: 362  RW 363


>ref|XP_003532586.1| PREDICTED: uncharacterized protein LOC100778583, partial [Glycine
            max]
          Length = 326

 Score =  243 bits (620), Expect = 7e-62
 Identities = 116/187 (62%), Positives = 152/187 (81%)
 Frame = -1

Query: 1188 GEGLSLVNCEDKDRLEMVLKYIEDGDLRKWSLPDIKAFNVGLNEMRPQLNCITNAYMFDQ 1009
            GE   LV+ +DK R+E++LKYIEDGDLR+WSLP I+AFN+GL+E R + NCI+N YM+ Q
Sbjct: 134  GEAPCLVDSKDKGRVELMLKYIEDGDLRRWSLPGIRAFNIGLSEWRSRFNCISNPYMYKQ 193

Query: 1008 LLEVNHMDLITRGNTYIHSCQDAVNKLLDRAFKLRLGKGFYGECLGIRADGNSHLSNDLG 829
            LL+++  DLIT+GN+ + S Q+A +KLL++AF++RLG+GFYGECLG+RADGNS+LS+++G
Sbjct: 194  LLKLSAEDLITKGNSCVSSRQNAASKLLEKAFRVRLGRGFYGECLGVRADGNSNLSDEIG 253

Query: 828  RELSLRSAEAGLRPIGAVIYMQRRNLKMCLRSTDDNTDTSEVXXXXXXXXXXXXXSFIIR 649
            + LS++SA  GLRPIGAVI+MQR NLKMCLRSTD +TDTSEV             SFIIR
Sbjct: 254  KLLSVKSAATGLRPIGAVIFMQRNNLKMCLRSTDSSTDTSEVAKAYGGGGSPSSSSFIIR 313

Query: 648  MDEYNQW 628
            +DEYNQW
Sbjct: 314  LDEYNQW 320


>ref|XP_002300315.1| predicted protein [Populus trichocarpa] gi|222847573|gb|EEE85120.1|
            predicted protein [Populus trichocarpa]
          Length = 366

 Score =  236 bits (601), Expect = 1e-59
 Identities = 115/188 (61%), Positives = 146/188 (77%)
 Frame = -1

Query: 1173 LVNCEDKDRLEMVLKYIEDGDLRKWSLPDIKAFNVGLNEMRPQLNCITNAYMFDQLLEVN 994
            L+  ED+DR+EMVLKYIED DLR+ SLPDI+AFNVG+ E R + N +TN YMF++LLE++
Sbjct: 179  LLKAEDQDRVEMVLKYIEDMDLRRRSLPDIRAFNVGIGEWRSKFNYVTNPYMFEELLEIS 238

Query: 993  HMDLITRGNTYIHSCQDAVNKLLDRAFKLRLGKGFYGECLGIRADGNSHLSNDLGRELSL 814
             +D+I +GN+YI S   A +KL+D+ FK+RLG+G YGECLG+RADG SHLS+++G+ELS+
Sbjct: 239  PVDIIEKGNSYISSRWTAASKLMDKVFKVRLGRGVYGECLGVRADGYSHLSDEIGKELSV 298

Query: 813  RSAEAGLRPIGAVIYMQRRNLKMCLRSTDDNTDTSEVXXXXXXXXXXXXXSFIIRMDEYN 634
            +SA AG RPIGAV+YM R +LKMCLRS D  TDTSEV             SFIIRMDEYN
Sbjct: 299  KSAAAGFRPIGAVVYMLRNDLKMCLRSIDSATDTSEVAKAYGGGGSPSSSSFIIRMDEYN 358

Query: 633  QWTPVNSS 610
            QW  VN+S
Sbjct: 359  QWLSVNAS 366


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