BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030598
         (1256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299746.1| predicted protein [Populus trichocarpa] gi|2...   524   e-146
emb|CBI36035.3| unnamed protein product [Vitis vinifera]              519   e-145
ref|XP_002277638.1| PREDICTED: DNA repair protein RadA homolog [...   519   e-145
ref|XP_003531642.1| PREDICTED: DNA repair protein RadA homolog [...   496   e-138
ref|XP_003627060.1| DNA repair protein radA-like protein [Medica...   494   e-137

>ref|XP_002299746.1| predicted protein [Populus trichocarpa] gi|222847004|gb|EEE84551.1|
            predicted protein [Populus trichocarpa]
          Length = 525

 Score =  524 bits (1349), Expect = e-146
 Identities = 267/337 (79%), Positives = 298/337 (88%)
 Frame = +2

Query: 2    VSGEESVEQIGNRADRMRIGTEDLFLYSNTDIEDILEKIQVLSPRVLIIDSIQTVYMKGV 181
            VSGEESVEQIGNRADRM IGTE+L+LYS+TDIEDIL KIQ LSPR LIIDSIQTVY+KGV
Sbjct: 189  VSGEESVEQIGNRADRMEIGTEELYLYSSTDIEDILGKIQHLSPRALIIDSIQTVYLKGV 248

Query: 182  TGSPGGLVQVKECTSSLLRFAKKTNIPVLLIGHVTKTGDIAGPRVLEHIVDVVLYMEGEK 361
             GS GGL QVKECTS+LLRFAK TNIP+LLIGHV K+GDIAGPRVLEHIVDVVLYMEGEK
Sbjct: 249  AGSAGGLSQVKECTSALLRFAKTTNIPILLIGHVNKSGDIAGPRVLEHIVDVVLYMEGEK 308

Query: 362  YSAHRFLRSVKNRFGSTDELGVFEMSQEGLQAVSNPSDIFLSEQHSDSVVLAGHAVAVII 541
            YS+HR LR VKNRFGSTDELGVFEMSQ GL  VSNPS+IFL+EQHSDS  LAG AVAVI+
Sbjct: 309  YSSHRLLRPVKNRFGSTDELGVFEMSQLGLAVVSNPSEIFLTEQHSDSDFLAGLAVAVIM 368

Query: 542  DGSRSFLLEIQALCLSDSSVARQFNGVQHCRAEMIIAVLIKQAGLKLQNNAIFVNVVSGV 721
            DGSRSFL+EIQALC+S SSV+R  NG+Q  RA+MII+VLIKQAGL LQ NAIF+NVVSGV
Sbjct: 369  DGSRSFLIEIQALCVSGSSVSRHINGIQSSRADMIISVLIKQAGLMLQENAIFLNVVSGV 428

Query: 722  KLQETAGDLAIAAAVCSSFLDVPIPNDVAFIGEIGLAGELRPVPRMEKRVNALVKLGYKK 901
             L ETAGD+AIAAA+CSSFL+ PIPN++AFIGEIGL GELR VPRMEKRV+ + KLGYK 
Sbjct: 429  MLTETAGDVAIAAAICSSFLEFPIPNNIAFIGEIGLGGELRAVPRMEKRVHTVAKLGYKM 488

Query: 902  CIVPQSTEKSLATLDLDGMMVLGCKNLKEVINIVFRA 1012
            C++P+S EKSLA L   GM ++GCKNLKEVIN VF+A
Sbjct: 489  CVIPKSAEKSLANLGFQGMKIVGCKNLKEVINTVFKA 525


>emb|CBI36035.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  519 bits (1337), Expect = e-145
 Identities = 264/335 (78%), Positives = 300/335 (89%)
 Frame = +2

Query: 2    VSGEESVEQIGNRADRMRIGTEDLFLYSNTDIEDILEKIQVLSPRVLIIDSIQTVYMKGV 181
            VSGEESVEQIGNRADRMRI TE+LFLYS+TDIEDIL ++ +LSPR L++DSIQTVY+KGV
Sbjct: 248  VSGEESVEQIGNRADRMRIDTEELFLYSSTDIEDILGQVHLLSPRALVVDSIQTVYLKGV 307

Query: 182  TGSPGGLVQVKECTSSLLRFAKKTNIPVLLIGHVTKTGDIAGPRVLEHIVDVVLYMEGEK 361
             GS GGL QVKECTS+LLRFAKKTNIPV LIGHVTK+GDIAGPRVLEHIVDVVLYMEGEK
Sbjct: 308  IGSAGGLSQVKECTSALLRFAKKTNIPVFLIGHVTKSGDIAGPRVLEHIVDVVLYMEGEK 367

Query: 362  YSAHRFLRSVKNRFGSTDELGVFEMSQEGLQAVSNPSDIFLSEQHSDSVVLAGHAVAVII 541
            +S+HR LRSVKNRFGSTDELGVFEM+Q GLQ VSNPS++FLSEQ+SDS +L G AVAVI+
Sbjct: 368  HSSHRLLRSVKNRFGSTDELGVFEMTQLGLQVVSNPSELFLSEQNSDSEILTGLAVAVIM 427

Query: 542  DGSRSFLLEIQALCLSDSSVARQFNGVQHCRAEMIIAVLIKQAGLKLQNNAIFVNVVSGV 721
            DGSRSFLLEIQALCLS S+VARQ NGV   RA+MIIAVL+KQAGLKLQ+N IF+NVVSGV
Sbjct: 428  DGSRSFLLEIQALCLSGSTVARQVNGVPASRADMIIAVLMKQAGLKLQDNGIFLNVVSGV 487

Query: 722  KLQETAGDLAIAAAVCSSFLDVPIPNDVAFIGEIGLAGELRPVPRMEKRVNALVKLGYKK 901
             L ETAGDLA+AAA+CSSFL+ PIPN +AFIGEIGL GELR VPRMEKRVN + KLGYKK
Sbjct: 488  TLAETAGDLAVAAAICSSFLEFPIPNGIAFIGEIGLGGELRTVPRMEKRVNTVAKLGYKK 547

Query: 902  CIVPQSTEKSLATLDLDGMMVLGCKNLKEVINIVF 1006
            CIVP++ EKSL TL+   + ++GC+N+KEVIN VF
Sbjct: 548  CIVPKAAEKSLPTLEDMNIEIVGCRNMKEVINTVF 582


>ref|XP_002277638.1| PREDICTED: DNA repair protein RadA homolog [Vitis vinifera]
          Length = 624

 Score =  519 bits (1337), Expect = e-145
 Identities = 264/335 (78%), Positives = 300/335 (89%)
 Frame = +2

Query: 2    VSGEESVEQIGNRADRMRIGTEDLFLYSNTDIEDILEKIQVLSPRVLIIDSIQTVYMKGV 181
            VSGEESVEQIGNRADRMRI TE+LFLYS+TDIEDIL ++ +LSPR L++DSIQTVY+KGV
Sbjct: 289  VSGEESVEQIGNRADRMRIDTEELFLYSSTDIEDILGQVHLLSPRALVVDSIQTVYLKGV 348

Query: 182  TGSPGGLVQVKECTSSLLRFAKKTNIPVLLIGHVTKTGDIAGPRVLEHIVDVVLYMEGEK 361
             GS GGL QVKECTS+LLRFAKKTNIPV LIGHVTK+GDIAGPRVLEHIVDVVLYMEGEK
Sbjct: 349  IGSAGGLSQVKECTSALLRFAKKTNIPVFLIGHVTKSGDIAGPRVLEHIVDVVLYMEGEK 408

Query: 362  YSAHRFLRSVKNRFGSTDELGVFEMSQEGLQAVSNPSDIFLSEQHSDSVVLAGHAVAVII 541
            +S+HR LRSVKNRFGSTDELGVFEM+Q GLQ VSNPS++FLSEQ+SDS +L G AVAVI+
Sbjct: 409  HSSHRLLRSVKNRFGSTDELGVFEMTQLGLQVVSNPSELFLSEQNSDSEILTGLAVAVIM 468

Query: 542  DGSRSFLLEIQALCLSDSSVARQFNGVQHCRAEMIIAVLIKQAGLKLQNNAIFVNVVSGV 721
            DGSRSFLLEIQALCLS S+VARQ NGV   RA+MIIAVL+KQAGLKLQ+N IF+NVVSGV
Sbjct: 469  DGSRSFLLEIQALCLSGSTVARQVNGVPASRADMIIAVLMKQAGLKLQDNGIFLNVVSGV 528

Query: 722  KLQETAGDLAIAAAVCSSFLDVPIPNDVAFIGEIGLAGELRPVPRMEKRVNALVKLGYKK 901
             L ETAGDLA+AAA+CSSFL+ PIPN +AFIGEIGL GELR VPRMEKRVN + KLGYKK
Sbjct: 529  TLAETAGDLAVAAAICSSFLEFPIPNGIAFIGEIGLGGELRTVPRMEKRVNTVAKLGYKK 588

Query: 902  CIVPQSTEKSLATLDLDGMMVLGCKNLKEVINIVF 1006
            CIVP++ EKSL TL+   + ++GC+N+KEVIN VF
Sbjct: 589  CIVPKAAEKSLPTLEDMNIEIVGCRNMKEVINTVF 623


>ref|XP_003531642.1| PREDICTED: DNA repair protein RadA homolog [Glycine max]
          Length = 560

 Score =  496 bits (1278), Expect = e-138
 Identities = 252/335 (75%), Positives = 296/335 (88%)
 Frame = +2

Query: 2    VSGEESVEQIGNRADRMRIGTEDLFLYSNTDIEDILEKIQVLSPRVLIIDSIQTVYMKGV 181
            VSGEESVEQIGNRADR+RI + D++LYS+ D+EDIL+K+Q LSP  LI+DSIQTVY+KG+
Sbjct: 221  VSGEESVEQIGNRADRLRIES-DIYLYSSNDVEDILKKVQYLSPGALIVDSIQTVYLKGI 279

Query: 182  TGSPGGLVQVKECTSSLLRFAKKTNIPVLLIGHVTKTGDIAGPRVLEHIVDVVLYMEGEK 361
             GSPGG++QVKECTS+LLRFAKKTNIPVLLIGHVTK+GDIAGPRVLEHIVDVVLYMEGEK
Sbjct: 280  MGSPGGIMQVKECTSALLRFAKKTNIPVLLIGHVTKSGDIAGPRVLEHIVDVVLYMEGEK 339

Query: 362  YSAHRFLRSVKNRFGSTDELGVFEMSQEGLQAVSNPSDIFLSEQHSDSVVLAGHAVAVII 541
            YS+HR LR+VKNRFGS DELGVFEMS  GLQAVSN S++FLSEQ  DS +LAG AVAVI+
Sbjct: 340  YSSHRMLRAVKNRFGSADELGVFEMSHSGLQAVSNASEMFLSEQLLDSEILAGLAVAVIM 399

Query: 542  DGSRSFLLEIQALCLSDSSVARQFNGVQHCRAEMIIAVLIKQAGLKLQNNAIFVNVVSGV 721
            DGSR+FL+EIQALCLS S+ +RQ NG+Q  RA+MII+VLIKQAGL+LQ +A+F+NVVSG+
Sbjct: 400  DGSRTFLIEIQALCLSGSTGSRQVNGIQQKRADMIISVLIKQAGLRLQEHAVFLNVVSGL 459

Query: 722  KLQETAGDLAIAAAVCSSFLDVPIPNDVAFIGEIGLAGELRPVPRMEKRVNALVKLGYKK 901
             L ETAGDLAIAAA+CSS L++PIPND+AFIGEIGL GELR VPRMEKRV  + KLGY+ 
Sbjct: 460  ALTETAGDLAIAAAICSSCLEIPIPNDIAFIGEIGLGGELRMVPRMEKRVYTVAKLGYRM 519

Query: 902  CIVPQSTEKSLATLDLDGMMVLGCKNLKEVINIVF 1006
            CIVP+  EK+L T  L+ M V+GC+NLKEVIN VF
Sbjct: 520  CIVPKVAEKALGTEGLEKMEVVGCRNLKEVINTVF 554


>ref|XP_003627060.1| DNA repair protein radA-like protein [Medicago truncatula]
            gi|355521082|gb|AET01536.1| DNA repair protein radA-like
            protein [Medicago truncatula]
          Length = 643

 Score =  494 bits (1271), Expect = e-137
 Identities = 246/335 (73%), Positives = 298/335 (88%)
 Frame = +2

Query: 2    VSGEESVEQIGNRADRMRIGTEDLFLYSNTDIEDILEKIQVLSPRVLIIDSIQTVYMKGV 181
            VSGEESVEQIGNRADR+ IG+ D++LYS+ DIEDIL+K+Q +SPR L++DS+QTVY+KG+
Sbjct: 220  VSGEESVEQIGNRADRLTIGS-DIYLYSSNDIEDILKKVQYISPRALVVDSVQTVYLKGI 278

Query: 182  TGSPGGLVQVKECTSSLLRFAKKTNIPVLLIGHVTKTGDIAGPRVLEHIVDVVLYMEGEK 361
             GSPGG++QVKECTS+LLRFAK TNIPVLLIGHVTK+GDIAGPRVLEHIVDVVLYMEGEK
Sbjct: 279  MGSPGGIMQVKECTSALLRFAKTTNIPVLLIGHVTKSGDIAGPRVLEHIVDVVLYMEGEK 338

Query: 362  YSAHRFLRSVKNRFGSTDELGVFEMSQEGLQAVSNPSDIFLSEQHSDSVVLAGHAVAVII 541
            Y++HR LR+VKNRFGSTDELGVFEMS  GLQAVSN S++FLSEQ  DS VLAG AVAVI+
Sbjct: 339  YTSHRMLRAVKNRFGSTDELGVFEMSHSGLQAVSNASEMFLSEQDLDSDVLAGLAVAVIM 398

Query: 542  DGSRSFLLEIQALCLSDSSVARQFNGVQHCRAEMIIAVLIKQAGLKLQNNAIFVNVVSGV 721
            DGSR+FL+EIQALCLS S+ +RQFNG+Q  RA+MII+VLIKQAGL+LQ +A+F+NVVSG+
Sbjct: 399  DGSRTFLIEIQALCLSGSTGSRQFNGIQANRADMIISVLIKQAGLRLQEHAVFLNVVSGL 458

Query: 722  KLQETAGDLAIAAAVCSSFLDVPIPNDVAFIGEIGLAGELRPVPRMEKRVNALVKLGYKK 901
             + ETAGDLAIAAA+CSS L++PIPND+AFIGEIGL GELR V RMEKRV+ + KLGY+ 
Sbjct: 459  TVTETAGDLAIAAAICSSCLELPIPNDIAFIGEIGLGGELRMVTRMEKRVHTVAKLGYRM 518

Query: 902  CIVPQSTEKSLATLDLDGMMVLGCKNLKEVINIVF 1006
            CI+P++ EK L T  L+ + V+GC+NLK+VIN +F
Sbjct: 519  CIIPKAAEKVLGTEGLENIKVVGCRNLKDVINTIF 553