BLASTX nr result

ID: Coptis23_contig00030558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030558
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78796.1| hypothetical protein VITISV_008076 [Vitis vinifera]   114   8e-24
ref|XP_002269196.2| PREDICTED: uncharacterized protein LOC100267...   111   5e-23
emb|CBI37340.3| unnamed protein product [Vitis vinifera]              111   5e-23
ref|XP_003551409.1| PREDICTED: uncharacterized protein LOC100819...   105   5e-21
ref|XP_002303042.1| hypothetical protein POPTRDRAFT_756271 [Popu...   102   3e-20

>emb|CAN78796.1| hypothetical protein VITISV_008076 [Vitis vinifera]
          Length = 2257

 Score =  114 bits (285), Expect = 8e-24
 Identities = 59/87 (67%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2    QSDKQGTK-LVPVHNSHIAALSQVSPNNLSGGILTPLDLCDTTTSSSDLAPLAYQGSHSS 178
            Q+D Q TK L PVH SHI AL+QV PNNL+GG LTPLDLCD TT SSD+  L YQGSH+S
Sbjct: 1218 QNDNQETKQLAPVHGSHIFALTQVCPNNLNGGPLTPLDLCDATTPSSDIMSLGYQGSHNS 1277

Query: 179  GLPISNQGPTPPVHPTSGANSMLQGSA 259
            GL ISNQG    + P SGANS LQGS+
Sbjct: 1278 GLAISNQGSVASMLPASGANSPLQGSS 1304


>ref|XP_002269196.2| PREDICTED: uncharacterized protein LOC100267035 [Vitis vinifera]
          Length = 2022

 Score =  111 bits (278), Expect = 5e-23
 Identities = 57/87 (65%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2    QSDKQGTK-LVPVHNSHIAALSQVSPNNLSGGILTPLDLCDTTTSSSDLAPLAYQGSHSS 178
            Q+D Q  K L PVH SH+ AL+QV PNNL+GG LTPLDLCD T SSSD+  L YQGSH+S
Sbjct: 1232 QNDNQEPKQLAPVHGSHVFALTQVCPNNLNGGPLTPLDLCDATASSSDIMSLGYQGSHNS 1291

Query: 179  GLPISNQGPTPPVHPTSGANSMLQGSA 259
            GL ISNQG    + P SGANS LQGS+
Sbjct: 1292 GLAISNQGSVASMLPASGANSPLQGSS 1318


>emb|CBI37340.3| unnamed protein product [Vitis vinifera]
          Length = 1688

 Score =  111 bits (278), Expect = 5e-23
 Identities = 57/87 (65%), Positives = 65/87 (74%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2    QSDKQGTK-LVPVHNSHIAALSQVSPNNLSGGILTPLDLCDTTTSSSDLAPLAYQGSHSS 178
            Q+D Q  K L PVH SH+ AL+QV PNNL+GG LTPLDLCD T SSSD+  L YQGSH+S
Sbjct: 1157 QNDNQEPKQLAPVHGSHVFALTQVCPNNLNGGPLTPLDLCDATASSSDIMSLGYQGSHNS 1216

Query: 179  GLPISNQGPTPPVHPTSGANSMLQGSA 259
            GL ISNQG    + P SGANS LQGS+
Sbjct: 1217 GLAISNQGSVASMLPASGANSPLQGSS 1243


>ref|XP_003551409.1| PREDICTED: uncharacterized protein LOC100819248 [Glycine max]
          Length = 1953

 Score =  105 bits (261), Expect = 5e-21
 Identities = 49/86 (56%), Positives = 62/86 (72%)
 Frame = +2

Query: 2    QSDKQGTKLVPVHNSHIAALSQVSPNNLSGGILTPLDLCDTTTSSSDLAPLAYQGSHSSG 181
            Q+D Q   LVPVHNSH+ ALSQ+ PNNL+G +LTPLDLCDT  +S D+  L YQGSH+ G
Sbjct: 1209 QNDNQ--PLVPVHNSHVFALSQICPNNLNGSVLTPLDLCDTNQTSPDVLSLGYQGSHAGG 1266

Query: 182  LPISNQGPTPPVHPTSGANSMLQGSA 259
            LP+SN      VHP++G NS +  S+
Sbjct: 1267 LPMSNHSSVSSVHPSAGLNSSISSSS 1292


>ref|XP_002303042.1| hypothetical protein POPTRDRAFT_756271 [Populus trichocarpa]
            gi|222844768|gb|EEE82315.1| hypothetical protein
            POPTRDRAFT_756271 [Populus trichocarpa]
          Length = 2006

 Score =  102 bits (254), Expect = 3e-20
 Identities = 50/87 (57%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2    QSDKQGTK-LVPVHNSHIAALSQVSPNNLSGGILTPLDLCDTTTSSSDLAPLAYQGSHSS 178
            Q++ Q  K +   HNSH  ALSQV PNNL+GG+LTPLDLCD++TS+ D+ P+ YQGSH+S
Sbjct: 1217 QNENQDPKQIAATHNSHFIALSQVCPNNLNGGVLTPLDLCDSSTSNPDVLPIVYQGSHAS 1276

Query: 179  GLPISNQGPTPPVHPTSGANSMLQGSA 259
             L + NQG      PTSGA S LQGS+
Sbjct: 1277 NLVMPNQGAVASTLPTSGAISSLQGSS 1303


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