BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030551
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...   104   7e-21
ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777...   103   2e-20
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...   102   3e-20
gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thali...   100   2e-19
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA...   100   2e-19

>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score =  104 bits (260), Expect = 7e-21
 Identities = 58/138 (42%), Positives = 90/138 (65%), Gaps = 5/138 (3%)
 Frame = +1

Query: 4    ISHLSFADDVLFFKR-EAESITAVKEYIDCFSNLTGLKLNSMKTSMLTGSMTEDDGLALD 180
            +++L+FADDVL F R +++S++ + E I  FS+ TGLK+N  K  M  G M   DG + +
Sbjct: 1007 LTNLTFADDVLLFCRGDSKSVSMMMETIRKFSDSTGLKVNPAKCQMFFGGM---DGCSKE 1063

Query: 181  NLLGIQKVT----PVKYLGLPLISTRLSSKDCLPLIERISVKISNWKNRALSYAGRLQLI 348
            NL  I        PV+YLG+PL   RL+ +  +PLI++I  ++ +W ++ LSYAGR+QL+
Sbjct: 1064 NLRRITDFAEGKLPVRYLGVPLSCKRLTIQQYMPLIDKIVDRVKHWTSKLLSYAGRIQLV 1123

Query: 349  QSILSSFHIYWTKTFILP 402
            +SI S+  +YW + F LP
Sbjct: 1124 KSITSAIAMYWMQCFPLP 1141


>ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777167 [Glycine max]
          Length = 1324

 Score =  103 bits (256), Expect = 2e-20
 Identities = 57/138 (41%), Positives = 90/138 (65%), Gaps = 5/138 (3%)
 Frame = +1

Query: 4    ISHLSFADDVLFFKR-EAESITAVKEYIDCFSNLTGLKLNSMKTSMLTGSMTEDDGLALD 180
            +++L+FADDVL F R +++S++ + E I  FS+ TGLK+N  K  M  G M   DG + +
Sbjct: 890  LTNLTFADDVLLFCRGDSKSVSMMMETIRKFSDSTGLKVNPAKCQMFFGGM---DGCSKE 946

Query: 181  NLLGIQKVT----PVKYLGLPLISTRLSSKDCLPLIERISVKISNWKNRALSYAGRLQLI 348
            NL  I        PV+YLG+PL   RL+ +  +PLI++I  ++ +W ++ LS+AGR+QL+
Sbjct: 947  NLRRITDFAEGKLPVRYLGMPLSCKRLTIQQYMPLIDKIVDRVKHWTSKLLSHAGRIQLV 1006

Query: 349  QSILSSFHIYWTKTFILP 402
            +SI S+  +YW + F LP
Sbjct: 1007 KSITSAIAMYWMQCFPLP 1024


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score =  102 bits (254), Expect = 3e-20
 Identities = 53/135 (39%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
 Frame = +1

Query: 4    ISHLSFADDVLFFKR-EAESITAVKEYIDCFSNLTGLKLNSMKTSMLTGSMTEDDGLALD 180
            ++HL FADD++ F    A S+  V      F+  +GL ++  K+++   S++ +   ++ 
Sbjct: 953  LTHLCFADDIMVFSAGSAHSLEGVLAIFKDFAAFSGLNISLEKSTLFMASISSETCASIL 1012

Query: 181  NLLGIQKVT-PVKYLGLPLISTRLSSKDCLPLIERISVKISNWKNRALSYAGRLQLIQSI 357
                    + PV+YLGLPL++ R++  DCLPL+E+I  +IS+WKNR LSYAGRLQL+ S+
Sbjct: 1013 ARFPFDSGSLPVRYLGLPLMTKRMTLADCLPLLEKIRSRISSWKNRFLSYAGRLQLLNSV 1072

Query: 358  LSSFHIYWTKTFILP 402
            +SS   +W   F LP
Sbjct: 1073 ISSLTKFWISAFRLP 1087


>gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 543

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 53/135 (39%), Positives = 83/135 (61%), Gaps = 2/135 (1%)
 Frame = +1

Query: 4   ISHLSFADDVLFF-KREAESITAVKEYIDCFSNLTGLKLNSMKTSMLTGSMTEDDGLALD 180
           I+HLSFADD+L F      S+ A+ + +D F   +GL +N  KT++L      +    + 
Sbjct: 239 ITHLSFADDILVFCDGSLSSLVAILDILDVFKKGSGLGINLQKTALLLDGGNFERNRIMA 298

Query: 181 NLLGI-QKVTPVKYLGLPLISTRLSSKDCLPLIERISVKISNWKNRALSYAGRLQLIQSI 357
             LG+ Q   PV+YLG+PL+S ++   D  PL++RI+ + ++W  R LS+AGRLQL++S+
Sbjct: 299 ASLGVSQGSLPVRYLGVPLMSQKMKKHDYQPLVDRINSRFTSWTARHLSFAGRLQLLKSV 358

Query: 358 LSSFHIYWTKTFILP 402
           + S   +W   FILP
Sbjct: 359 IYSTINFWASIFILP 373


>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
           AT4g02490 [Arabidopsis thaliana]
          Length = 657

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 53/135 (39%), Positives = 83/135 (61%), Gaps = 2/135 (1%)
 Frame = +1

Query: 4   ISHLSFADDVLFF-KREAESITAVKEYIDCFSNLTGLKLNSMKTSMLTGSMTEDDGLALD 180
           I+HLSFADD+L F      S+ A+ + +D F   +GL +N  KT++L      +    + 
Sbjct: 239 ITHLSFADDILVFCDGSLSSLVAILDILDVFKKGSGLGINLQKTALLLDGGNFERNRIMA 298

Query: 181 NLLGI-QKVTPVKYLGLPLISTRLSSKDCLPLIERISVKISNWKNRALSYAGRLQLIQSI 357
             LG+ Q   PV+YLG+PL+S ++   D  PL++RI+ + ++W  R LS+AGRLQL++S+
Sbjct: 299 ASLGVSQGSLPVRYLGVPLMSQKMKKHDYQPLVDRINSRFTSWTARHLSFAGRLQLLKSV 358

Query: 358 LSSFHIYWTKTFILP 402
           + S   +W   FILP
Sbjct: 359 IYSTINFWASIFILP 373