BLASTX nr result

ID: Coptis23_contig00030545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030545
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509947.1| serine-threonine protein kinase, plant-type,...   124   1e-26
ref|XP_002304551.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24
ref|XP_003631375.1| PREDICTED: probable inactive receptor kinase...    99   5e-19
ref|XP_001752184.1| predicted protein [Physcomitrella patens sub...    60   2e-07
ref|XP_001778285.1| predicted protein [Physcomitrella patens sub...    59   4e-07

>ref|XP_002509947.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223549846|gb|EEF51334.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 306

 Score =  124 bits (310), Expect = 1e-26
 Identities = 71/155 (45%), Positives = 95/155 (61%)
 Frame = +3

Query: 21  SCLSSQQCTYEDEECIVGLTGELPLNMCDGGSFNKSRVRGVLCLREVMLGSVQXXXXXXX 200
           SC       Y DE+C+VG   ++PL  C  G+  +S     L LRE++  SV        
Sbjct: 23  SCKLGSILEYSDEDCLVGFIDDMPLVFC--GNNTESH----LTLREILRASVAV------ 70

Query: 201 XXXXXXXXXXXXXMGESGVGISEKVVLLDGTVYAEKRFSKGTVRRKEFGRRVERIVQVSK 380
                        MGES +G++EK VLL+G +YA KRF    V R+EFG+RVER+ +VS+
Sbjct: 71  -------------MGESRLGMTEKAVLLEGKIYAVKRFRNVCVGRREFGKRVERLARVSQ 117

Query: 381 GSEYLLQVRAYLFAKRIKVILSDYYPMGSLADLLN 485
             +YL+ VRAYL+AKRIK +LS+YYPMGSLADLL+
Sbjct: 118 KCDYLVPVRAYLYAKRIKFVLSEYYPMGSLADLLS 152


>ref|XP_002304551.1| predicted protein [Populus trichocarpa] gi|222841983|gb|EEE79530.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score =  115 bits (287), Expect = 5e-24
 Identities = 69/144 (47%), Positives = 88/144 (61%)
 Frame = +3

Query: 51  EDEECIVGLTGELPLNMCDGGSFNKSRVRGVLCLREVMLGSVQXXXXXXXXXXXXXXXXX 230
           + E+C+VG   + PL  C G S ++      L LRE +  SV                  
Sbjct: 28  DSEDCLVGFMDDRPLFFC-GESVSR------LSLRETLRASV------------------ 62

Query: 231 XXXMGESGVGISEKVVLLDGTVYAEKRFSKGTVRRKEFGRRVERIVQVSKGSEYLLQVRA 410
              MGES +G++EKVVLL G VYA KRF    VRR+EFG+R+ER+ QVSK  EYL+ V A
Sbjct: 63  -GVMGESPLGMTEKVVLLRGKVYALKRFRALRVRRREFGKRIERLAQVSKRCEYLVPVIA 121

Query: 411 YLFAKRIKVILSDYYPMGSLADLL 482
           YL+ KRIK ++SDY+PMGSLADLL
Sbjct: 122 YLYTKRIKFVVSDYFPMGSLADLL 145


>ref|XP_003631375.1| PREDICTED: probable inactive receptor kinase At5g58300-like [Vitis
           vinifera] gi|297742320|emb|CBI34469.3| unnamed protein
           product [Vitis vinifera]
          Length = 359

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 65/152 (42%), Positives = 88/152 (57%), Gaps = 10/152 (6%)
 Frame = +3

Query: 57  EEC-IVGLTGELPLNMCDGGSFNKSRVRGVLC--------LREVMLGSVQXXXXXXXXXX 209
           ++C IVGL   +PL+ CD    +  R R   C        LR+V+  SV           
Sbjct: 28  DQCDIVGLMEGMPLSFCD---HDHRRDRSGTCMKCPAKPTLRDVLSSSV----------- 73

Query: 210 XXXXXXXXXXMGESGVGISEKVVLLDGT-VYAEKRFSKGTVRRKEFGRRVERIVQVSKGS 386
                     MGES + ++EKVV+  G  VYA KRF K ++ + EFGRRVER+  +S+  
Sbjct: 74  --------GVMGESPLAMTEKVVMYRGKRVYAVKRFRKVSLGKMEFGRRVERVAGMSRRC 125

Query: 387 EYLLQVRAYLFAKRIKVILSDYYPMGSLADLL 482
           EYL+ + AYL+AKR+K +L+DYYPMGSLADLL
Sbjct: 126 EYLVPLTAYLYAKRMKFVLTDYYPMGSLADLL 157


>ref|XP_001752184.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162696579|gb|EDQ82917.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 671

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/82 (40%), Positives = 52/82 (63%)
 Frame = +3

Query: 240 MGESGVGISEKVVLLDGTVYAEKRFSKGTVRRKEFGRRVERIVQVSKGSEYLLQVRAYLF 419
           +G+  VG + K VL DGT+ A KR    T  RK+F  +V+ + ++   +  L+ +RAY F
Sbjct: 347 LGKGSVGTAYKAVLEDGTILAVKRLKDVTTGRKDFEAQVDVVGKLQHRN--LVPLRAYYF 404

Query: 420 AKRIKVILSDYYPMGSLADLLN 485
           +K  K+++ DY PMGSL+ LL+
Sbjct: 405 SKDEKLLVYDYMPMGSLSALLH 426


>ref|XP_001778285.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162670382|gb|EDQ56952.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 658

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/84 (41%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
 Frame = +3

Query: 240 MGESGVGISEKVVLLDGTVYAEKRFSKGTVRRKEFGRRVERIVQVSKGSEY--LLQVRAY 413
           +G+  VG + K +L DGTV A KR    T  +K+F    E ++QV    ++  L+ +RAY
Sbjct: 332 LGKGTVGTAYKAILEDGTVMAVKRLKDVTTCKKDF----ETLIQVVGKLQHRNLVPLRAY 387

Query: 414 LFAKRIKVILSDYYPMGSLADLLN 485
            F+K  K+++SDY PMG+LA LL+
Sbjct: 388 YFSKDEKLLVSDYMPMGNLAALLH 411


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