BLASTX nr result

ID: Coptis23_contig00030543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030543
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269196.2| PREDICTED: uncharacterized protein LOC100267...   110   9e-23
emb|CBI37340.3| unnamed protein product [Vitis vinifera]              110   9e-23
emb|CAN78796.1| hypothetical protein VITISV_008076 [Vitis vinifera]   110   9e-23
ref|XP_002521085.1| DNA binding protein, putative [Ricinus commu...   104   6e-21
ref|XP_002303042.1| hypothetical protein POPTRDRAFT_756271 [Popu...   104   8e-21

>ref|XP_002269196.2| PREDICTED: uncharacterized protein LOC100267035 [Vitis vinifera]
          Length = 2022

 Score =  110 bits (276), Expect = 9e-23
 Identities = 56/105 (53%), Positives = 72/105 (68%)
 Frame = +1

Query: 76  SQSRSPRIVDSSSCELTLNTLSEADSTTSPVTQSCLNDNLKLVNQAHEDSILKEAKAIEE 255
           S  R    + SS CEL   TLS   S  +P  Q+C  + L+++++AHEDSIL+EA+ IE 
Sbjct: 531 STGRPQGSMGSSICELPEATLSRKGSFAAPDLQTCAGNRLRIMDKAHEDSILEEARIIEA 590

Query: 256 RHKSIAELSMCNFFLETRERSHWDYLLEEMAWLANDFMQERLWKI 390
           + K IAELS+    LE   +SHWD++LEEMAWLANDF QERLWKI
Sbjct: 591 KRKRIAELSVGALPLEYHRKSHWDFVLEEMAWLANDFAQERLWKI 635


>emb|CBI37340.3| unnamed protein product [Vitis vinifera]
          Length = 1688

 Score =  110 bits (276), Expect = 9e-23
 Identities = 56/105 (53%), Positives = 72/105 (68%)
 Frame = +1

Query: 76  SQSRSPRIVDSSSCELTLNTLSEADSTTSPVTQSCLNDNLKLVNQAHEDSILKEAKAIEE 255
           S  R    + SS CEL   TLS   S  +P  Q+C  + L+++++AHEDSIL+EA+ IE 
Sbjct: 456 STGRPQGSMGSSICELPEATLSRKGSFAAPDLQTCAGNRLRIMDKAHEDSILEEARIIEA 515

Query: 256 RHKSIAELSMCNFFLETRERSHWDYLLEEMAWLANDFMQERLWKI 390
           + K IAELS+    LE   +SHWD++LEEMAWLANDF QERLWKI
Sbjct: 516 KRKRIAELSVGALPLEYHRKSHWDFVLEEMAWLANDFAQERLWKI 560


>emb|CAN78796.1| hypothetical protein VITISV_008076 [Vitis vinifera]
          Length = 2257

 Score =  110 bits (276), Expect = 9e-23
 Identities = 56/105 (53%), Positives = 72/105 (68%)
 Frame = +1

Query: 76  SQSRSPRIVDSSSCELTLNTLSEADSTTSPVTQSCLNDNLKLVNQAHEDSILKEAKAIEE 255
           S  R    + SS CEL   TLS   S  +P  Q+C  + L+++++AHEDSIL+EA+ IE 
Sbjct: 531 STGRPQGSMGSSICELPEATLSRKGSFAAPDLQTCAGNRLRIMDKAHEDSILEEARIIEA 590

Query: 256 RHKSIAELSMCNFFLETRERSHWDYLLEEMAWLANDFMQERLWKI 390
           + K IAELS+    LE   +SHWD++LEEMAWLANDF QERLWKI
Sbjct: 591 KRKRIAELSVGALPLEYHRKSHWDFVLEEMAWLANDFAQERLWKI 635


>ref|XP_002521085.1| DNA binding protein, putative [Ricinus communis]
           gi|223539654|gb|EEF41236.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 2009

 Score =  104 bits (260), Expect = 6e-21
 Identities = 52/98 (53%), Positives = 71/98 (72%)
 Frame = +1

Query: 97  IVDSSSCELTLNTLSEADSTTSPVTQSCLNDNLKLVNQAHEDSILKEAKAIEERHKSIAE 276
           +  S + EL  +TLSE +S+ +P  QSC + +L    +AHEDSIL+EA++IE + K IAE
Sbjct: 522 VCPSGNKELPESTLSEKNSSAAPDPQSCSSGHLISAEKAHEDSILEEAQSIEAKRKRIAE 581

Query: 277 LSMCNFFLETRERSHWDYLLEEMAWLANDFMQERLWKI 390
           L +    LE+R +SHWD++LEEM WLANDF QERLWK+
Sbjct: 582 LPIGIVPLESRRKSHWDFVLEEMMWLANDFAQERLWKM 619


>ref|XP_002303042.1| hypothetical protein POPTRDRAFT_756271 [Populus trichocarpa]
           gi|222844768|gb|EEE82315.1| hypothetical protein
           POPTRDRAFT_756271 [Populus trichocarpa]
          Length = 2006

 Score =  104 bits (259), Expect = 8e-21
 Identities = 58/124 (46%), Positives = 77/124 (62%)
 Frame = +1

Query: 19  GNLNNQSGNVSNFKIPGSSSQSRSPRIVDSSSCELTLNTLSEADSTTSPVTQSCLNDNLK 198
           GN+   S N +   I  S  Q      +D    EL    L E +S  +   QSC N ++K
Sbjct: 494 GNMLADSSNSNREIIYPSGPQGS----LDPPVQELPQPILLEKNSFVATDPQSCSNTHVK 549

Query: 199 LVNQAHEDSILKEAKAIEERHKSIAELSMCNFFLETRERSHWDYLLEEMAWLANDFMQER 378
           +V+++HEDSIL+EA+ IE + K IAELS+ +   E R RSHWD++LEEMAWLAND  QER
Sbjct: 550 VVDKSHEDSILEEARVIEAKRKRIAELSVASVHSENRRRSHWDFVLEEMAWLANDVAQER 609

Query: 379 LWKI 390
           LWK+
Sbjct: 610 LWKM 613


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