BLASTX nr result

ID: Coptis23_contig00030538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030538
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511427.1| conserved hypothetical protein [Ricinus comm...   159   3e-37
ref|XP_002283199.1| PREDICTED: uncharacterized protein LOC100256...   157   1e-36
ref|XP_002446636.1| hypothetical protein SORBIDRAFT_06g019340 [S...   151   8e-35
dbj|BAJ97933.1| predicted protein [Hordeum vulgare subsp. vulgare]    150   1e-34
ref|NP_001159120.1| hypothetical protein [Zea mays] gi|219887417...   146   2e-33

>ref|XP_002511427.1| conserved hypothetical protein [Ricinus communis]
           gi|223550542|gb|EEF52029.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 262

 Score =  159 bits (402), Expect = 3e-37
 Identities = 72/97 (74%), Positives = 86/97 (88%)
 Frame = -1

Query: 565 NPDSVVVVGFLCTSLVGGFIYINRVKAIKSIKMRTRQSLKLILIIASLYCLWCACQKYWR 386
           NPD+V+VVGFLCT L+GGFIYINRVK++KS + ++ QSLK IL+IASLYCLWCA Q Y  
Sbjct: 157 NPDAVIVVGFLCTCLIGGFIYINRVKSLKSTRKQSYQSLKFILVIASLYCLWCASQMYGV 216

Query: 385 NPPQPAIGEEADLGVIAFLAVYFFLPHSLCIISMNSK 275
           NPP+PA+GEEADLGV+ FLA YFFLPHSLCI+SMN+K
Sbjct: 217 NPPRPAVGEEADLGVLVFLATYFFLPHSLCIMSMNTK 253


>ref|XP_002283199.1| PREDICTED: uncharacterized protein LOC100256944 [Vitis vinifera]
           gi|297733811|emb|CBI15058.3| unnamed protein product
           [Vitis vinifera]
          Length = 262

 Score =  157 bits (396), Expect = 1e-36
 Identities = 72/104 (69%), Positives = 87/104 (83%)
 Frame = -1

Query: 565 NPDSVVVVGFLCTSLVGGFIYINRVKAIKSIKMRTRQSLKLILIIASLYCLWCACQKYWR 386
           NPD+VVVVGFLC SL+GGF+YINR+K  KSIK +T QS+KLI+IIA+LYCLWCA Q YW 
Sbjct: 156 NPDAVVVVGFLCASLIGGFMYINRLKPSKSIKKQTSQSVKLIVIIATLYCLWCASQIYWV 215

Query: 385 NPPQPAIGEEADLGVIAFLAVYFFLPHSLCIISMNSKYFYDATQ 254
           NP + A+GEEADLGV+ FLA+YFFLPH+ CI+SMN K  +D  Q
Sbjct: 216 NPRRAAVGEEADLGVLVFLAIYFFLPHTFCIMSMNPKDHFDMEQ 259


>ref|XP_002446636.1| hypothetical protein SORBIDRAFT_06g019340 [Sorghum bicolor]
           gi|241937819|gb|EES10964.1| hypothetical protein
           SORBIDRAFT_06g019340 [Sorghum bicolor]
          Length = 266

 Score =  151 bits (381), Expect = 8e-35
 Identities = 70/107 (65%), Positives = 85/107 (79%)
 Frame = -1

Query: 565 NPDSVVVVGFLCTSLVGGFIYINRVKAIKSIKMRTRQSLKLILIIASLYCLWCACQKYWR 386
           NPD+V+VVG LCT L+GGF+YINRVK  +S   ++ QS  LIL+IA+LYC+WCA Q Y R
Sbjct: 158 NPDAVLVVGLLCTCLMGGFVYINRVKHGRSAAEKSNQSFFLILMIATLYCMWCASQIYLR 217

Query: 385 NPPQPAIGEEADLGVIAFLAVYFFLPHSLCIISMNSKYFYDATQEVP 245
            PPQPAIGEEADLGVI FLA+Y FLPH LC++SMN K + DA  E+P
Sbjct: 218 QPPQPAIGEEADLGVIIFLAIYLFLPHGLCVLSMNQKDYTDALNELP 264


>dbj|BAJ97933.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 267

 Score =  150 bits (379), Expect = 1e-34
 Identities = 69/107 (64%), Positives = 84/107 (78%)
 Frame = -1

Query: 565 NPDSVVVVGFLCTSLVGGFIYINRVKAIKSIKMRTRQSLKLILIIASLYCLWCACQKYWR 386
           NPD+V VVG LC  L+GGF+YINRVK  KS+  ++ QS  LIL+IA+LYC+WCA Q Y R
Sbjct: 160 NPDAVFVVGLLCICLIGGFVYINRVKHGKSVTEKSNQSFFLILVIATLYCMWCASQIYLR 219

Query: 385 NPPQPAIGEEADLGVIAFLAVYFFLPHSLCIISMNSKYFYDATQEVP 245
           NPPQPAIGEEADLGVI FLA+Y FLPH LC++SMN K + +A   +P
Sbjct: 220 NPPQPAIGEEADLGVIIFLAIYLFLPHGLCVLSMNQKDYNEALDGLP 266


>ref|NP_001159120.1| hypothetical protein [Zea mays] gi|219887417|gb|ACL54083.1| unknown
           [Zea mays] gi|414586832|tpg|DAA37403.1| TPA:
           hypothetical protein ZEAMMB73_559678 [Zea mays]
          Length = 266

 Score =  146 bits (369), Expect = 2e-33
 Identities = 68/107 (63%), Positives = 83/107 (77%)
 Frame = -1

Query: 565 NPDSVVVVGFLCTSLVGGFIYINRVKAIKSIKMRTRQSLKLILIIASLYCLWCACQKYWR 386
           NPD+V+VVG LCT L+GG++YINRV   +S   ++ QS  LIL+IA+LYC+WCA Q Y R
Sbjct: 158 NPDAVLVVGLLCTCLMGGYVYINRVNHGRSAAEKSNQSFFLILMIATLYCMWCASQIYLR 217

Query: 385 NPPQPAIGEEADLGVIAFLAVYFFLPHSLCIISMNSKYFYDATQEVP 245
            PPQPAIGEEADLGVI FLA+Y FLPH LC +SMN K + DA  E+P
Sbjct: 218 QPPQPAIGEEADLGVIIFLAIYLFLPHGLCALSMNQKDYTDALNELP 264


Top