BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030535
         (755 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni...   149   5e-34
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa...   147   2e-33
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]       146   4e-33
ref|XP_003544056.1| PREDICTED: uncharacterized protein LOC100810...   146   5e-33
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]                 146   5e-33

>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1616

 Score =  149 bits (377), Expect = 5e-34
 Identities = 74/193 (38%), Positives = 110/193 (56%), Gaps = 6/193 (3%)
 Frame = -3

Query: 561  SATHFSLVATPAMIIGEGDK-ETWKRHSIFRTRCISESKLCTVVIDDGSTNNLVS*EMVD 385
            +A H+  +    ++  + ++ E  +RH++F+T+C+ + + C V+ID GS NNL S EMV+
Sbjct: 462  AAEHYESLVVQRVLSAQMERAEQNQRHTLFQTKCVIKERSCRVIIDGGSCNNLASAEMVE 521

Query: 384  KLGLQTTKHPKPFSIQWFKKGDPVAVNHQCLVPLTIGPYEDTVMCTVVPMDVCHLLLGRP 205
            KL L T  HP+P+ IQW      V V     V   IG Y D++ C VVPM  C +LLGRP
Sbjct: 522  KLALSTQPHPQPYYIQWLNSSGKVKVTRLVRVHFAIGSYHDSINCDVVPMQACSMLLGRP 581

Query: 204  WQFDHRSIHDGAKNTHSFLHNGRKLILEPLKPPDIETTMCTTFLAEARESGMFFSLTSH- 28
            WQFD  S+H G  N +SF+HNG+KL+L P+ P   E  +       +++     + + H 
Sbjct: 582  WQFDKDSLHFGKSNQYSFVHNGKKLVLHPMSP---EVILKDELARASKQKNQEHTRSEHL 638

Query: 27   ----EKNKYAKKP 1
                E  K+ KKP
Sbjct: 639  IAANELEKHKKKP 651


>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|15217296|gb|AAK92640.1|AC079634_1 Putative
            retroelement [Oryza sativa Japonica Group]
            gi|31431373|gb|AAP53161.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1708

 Score =  147 bits (372), Expect = 2e-33
 Identities = 73/193 (37%), Positives = 109/193 (56%), Gaps = 6/193 (3%)
 Frame = -3

Query: 561  SATHFSLVATPAMIIGEGDK-ETWKRHSIFRTRCISESKLCTVVIDDGSTNNLVS*EMVD 385
            +A H+  +    ++  + ++ E  +RH++F+T+C+ + + C V+ID GS NNL S EMV+
Sbjct: 462  AAEHYESLVVQRVLSAQMERAEQNQRHTLFQTKCVIKERSCRVIIDRGSCNNLASAEMVE 521

Query: 384  KLGLQTTKHPKPFSIQWFKKGDPVAVNHQCLVPLTIGPYEDTVMCTVVPMDVCHLLLGRP 205
            KL L T  HP+P+ IQW      V V     V   IG Y D++ C VVPM  C + LGRP
Sbjct: 522  KLALSTQPHPQPYYIQWLNSSGKVKVTRLVRVHFAIGSYHDSINCDVVPMQACSIFLGRP 581

Query: 204  WQFDHRSIHDGAKNTHSFLHNGRKLILEPLKPPDIETTMCTTFLAEARESGMFFSLTSH- 28
            WQFD  S+H G  N +SF+HNG+KL+L P+ P   E  +       +++     + + H 
Sbjct: 582  WQFDKDSLHFGKSNQYSFVHNGKKLVLHPMSP---EVILKDELARASKQKNQEHTRSEHL 638

Query: 27   ----EKNKYAKKP 1
                E  K+ KKP
Sbjct: 639  IAANELEKHKKKP 651


>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
          Length = 1587

 Score =  146 bits (369), Expect = 4e-33
 Identities = 73/193 (37%), Positives = 109/193 (56%), Gaps = 6/193 (3%)
 Frame = -3

Query: 561  SATHFSLVATPAMIIGEGDK-ETWKRHSIFRTRCISESKLCTVVIDDGSTNNLVS*EMVD 385
            +A H+  +    ++  + ++ E  + H++F+T+C+ + + C V+ID GS NNL S EMV+
Sbjct: 462  AAEHYESLVVQRVLSAQMERAEQNQLHTLFQTKCVIKERSCHVIIDGGSCNNLASAEMVE 521

Query: 384  KLGLQTTKHPKPFSIQWFKKGDPVAVNHQCLVPLTIGPYEDTVMCTVVPMDVCHLLLGRP 205
            KL L T  HP+P+ IQW      V V     V   IG Y D++ C VVPM  C +LLGRP
Sbjct: 522  KLALSTQPHPQPYYIQWLNSSGKVKVTRLVRVHFAIGSYHDSINCDVVPMQACSMLLGRP 581

Query: 204  WQFDHRSIHDGAKNTHSFLHNGRKLILEPLKPPDIETTMCTTFLAEARESGMFFSLTSH- 28
            WQFD  S+H G  N +SF+HNG+KL+L P+ P   E  +       +++     + + H 
Sbjct: 582  WQFDKDSLHFGKSNQYSFVHNGKKLVLHPMSP---EVILKDELARASKQKNQEHTRSEHL 638

Query: 27   ----EKNKYAKKP 1
                E  K+ KKP
Sbjct: 639  IAANELEKHKKKP 651


>ref|XP_003544056.1| PREDICTED: uncharacterized protein LOC100810263 [Glycine max]
          Length = 1150

 Score =  146 bits (368), Expect = 5e-33
 Identities = 72/166 (43%), Positives = 96/166 (57%), Gaps = 3/166 (1%)
 Frame = -3

Query: 504 KETWKRHSIFRTRCISESKLCTVVIDDGSTNNLVS*EMVDKLGLQTTKHPKPFSIQWFKK 325
           +E  +R +IF TRC+   K+C V+ID GS  NL S  +V KL L T  HP+P+ +QW  K
Sbjct: 341 EEEIQRENIFHTRCLINGKVCMVIIDGGSCTNLASARLVSKLNLATKPHPRPYKLQWLSK 400

Query: 324 GDPVAVNHQCLVPLTIGPYEDTVMCTVVPMDVCHLLLGRPWQFDHRSIHDGAKNTHSFLH 145
              V V  Q  V ++IG Y D V+C VVPM+  HLLLGRPWQFD R+ HD   N  SF+H
Sbjct: 401 DGEVQVRQQVEVDVSIGKYNDKVLCDVVPMEASHLLLGRPWQFDKRANHDDYTNKISFMH 460

Query: 144 NGRKLILEPLKPPDI---ETTMCTTFLAEARESGMFFSLTSHEKNK 16
             +K++L+PL P ++   +  M    L E RE          EK +
Sbjct: 461 QDKKIVLKPLSPQEVCEDQKKMREKLLQEKREKEKVSKTLESEKKR 506


>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
          Length = 1475

 Score =  146 bits (368), Expect = 5e-33
 Identities = 74/173 (42%), Positives = 102/173 (58%), Gaps = 1/173 (0%)
 Frame = -3

Query: 573 DPVMSATHFSLVATPAMIIGEGDKETWKRHSIFRTRCISESKLCTVVIDDGSTNNLVS*E 394
           D VM     SLV    M       E  +R  IFR+RC  + ++C ++ID GS  N+ S  
Sbjct: 357 DVVMPDAGLSLVTWRVMHTQPQPLEMDQRQQIFRSRCTIKGRVCNLIIDGGSCTNVASST 416

Query: 393 MVDKLGLQTTKHPKPFSIQWFKKGDPVAVNHQCLVPLTIGP-YEDTVMCTVVPMDVCHLL 217
           +++KL L T  HP P+ ++W  KG  V V+ QCLV  +IG  Y D  +C V+PMD CHLL
Sbjct: 417 LIEKLSLPTQDHPSPYKLRWLNKGAEVRVDKQCLVTFSIGKNYSDEALCDVLPMDACHLL 476

Query: 216 LGRPWQFDHRSIHDGAKNTHSFLHNGRKLILEPLKPPDIETTMCTTFLAEARE 58
           LGRPW+FD  S+H G  NT++F    RK+IL PL PP ++ T   + L  ++E
Sbjct: 477 LGRPWEFDRDSVHHGRDNTYTFKFRSRKVILTPL-PPVLKHTTPPSMLEPSKE 528