BLASTX nr result
ID: Coptis23_contig00030529
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00030529 (593 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAK76508.1| putative beta-amylase [Arabidopsis thaliana] gi|2... 188 5e-46 ref|NP_568829.2| inactive beta-amylase 4 [Arabidopsis thaliana] ... 188 5e-46 dbj|BAH20280.1| AT5G55700 [Arabidopsis thaliana] 188 5e-46 ref|XP_002265698.1| PREDICTED: inactive beta-amylase 4, chloropl... 188 7e-46 ref|XP_002864407.1| beta-amylase 6 [Arabidopsis lyrata subsp. ly... 185 6e-45 >gb|AAK76508.1| putative beta-amylase [Arabidopsis thaliana] gi|25054836|gb|AAN71908.1| putative beta-amylase [Arabidopsis thaliana] Length = 484 Score = 188 bits (478), Expect = 5e-46 Identities = 88/131 (67%), Positives = 107/131 (81%) Frame = +3 Query: 201 NSRLLSMAHEETSKSLVLESFKQRRVPIFVMMPVDALGIDTSGVPQIRKVKALTMSLKAL 380 NSR+ SM E S+S VL S + +RVP+FVMMP+D GID SG P+I+++KALT+SLKAL Sbjct: 20 NSRIFSMDAREKSRSFVLVSSRHKRVPVFVMMPIDTFGIDASGCPKIKRLKALTVSLKAL 79 Query: 381 KLAGVHGITVEVWWGIVERCSPFDYNWSVYEQLFKLISGSGLKLHVSLCFHSNEQSFNWK 560 KLAGVHGI VEVWWGIVER SP ++ WS+YE+LF+LIS +GLKLHV+LCFHSN F K Sbjct: 80 KLAGVHGIAVEVWWGIVERFSPLEFKWSLYEELFRLISEAGLKLHVALCFHSNMHLFGGK 139 Query: 561 GGVSLPLWILE 593 GG+SLPLWI E Sbjct: 140 GGISLPLWIRE 150 >ref|NP_568829.2| inactive beta-amylase 4 [Arabidopsis thaliana] gi|75334054|sp|Q9FM68.1|BAM4_ARATH RecName: Full=Inactive beta-amylase 4, chloroplastic; AltName: Full=Inactive beta-amylase 6; Flags: Precursor gi|9758604|dbj|BAB09237.1| beta-amylase [Arabidopsis thaliana] gi|332009286|gb|AED96669.1| inactive beta-amylase 4 [Arabidopsis thaliana] Length = 531 Score = 188 bits (478), Expect = 5e-46 Identities = 88/131 (67%), Positives = 107/131 (81%) Frame = +3 Query: 201 NSRLLSMAHEETSKSLVLESFKQRRVPIFVMMPVDALGIDTSGVPQIRKVKALTMSLKAL 380 NSR+ SM E S+S VL S + +RVP+FVMMP+D GID SG P+I+++KALT+SLKAL Sbjct: 67 NSRIFSMDAREKSRSFVLVSSRHKRVPVFVMMPIDTFGIDASGCPKIKRLKALTVSLKAL 126 Query: 381 KLAGVHGITVEVWWGIVERCSPFDYNWSVYEQLFKLISGSGLKLHVSLCFHSNEQSFNWK 560 KLAGVHGI VEVWWGIVER SP ++ WS+YE+LF+LIS +GLKLHV+LCFHSN F K Sbjct: 127 KLAGVHGIAVEVWWGIVERFSPLEFKWSLYEELFRLISEAGLKLHVALCFHSNMHLFGGK 186 Query: 561 GGVSLPLWILE 593 GG+SLPLWI E Sbjct: 187 GGISLPLWIRE 197 >dbj|BAH20280.1| AT5G55700 [Arabidopsis thaliana] Length = 498 Score = 188 bits (478), Expect = 5e-46 Identities = 88/131 (67%), Positives = 107/131 (81%) Frame = +3 Query: 201 NSRLLSMAHEETSKSLVLESFKQRRVPIFVMMPVDALGIDTSGVPQIRKVKALTMSLKAL 380 NSR+ SM E S+S VL S + +RVP+FVMMP+D GID SG P+I+++KALT+SLKAL Sbjct: 34 NSRIFSMDAREKSRSFVLVSSRHKRVPVFVMMPIDTFGIDASGCPKIKRLKALTVSLKAL 93 Query: 381 KLAGVHGITVEVWWGIVERCSPFDYNWSVYEQLFKLISGSGLKLHVSLCFHSNEQSFNWK 560 KLAGVHGI VEVWWGIVER SP ++ WS+YE+LF+LIS +GLKLHV+LCFHSN F K Sbjct: 94 KLAGVHGIAVEVWWGIVERFSPLEFKWSLYEELFRLISEAGLKLHVALCFHSNMHLFGGK 153 Query: 561 GGVSLPLWILE 593 GG+SLPLWI E Sbjct: 154 GGISLPLWIRE 164 >ref|XP_002265698.1| PREDICTED: inactive beta-amylase 4, chloroplastic [Vitis vinifera] gi|296089917|emb|CBI39736.3| unnamed protein product [Vitis vinifera] Length = 522 Score = 188 bits (477), Expect = 7e-46 Identities = 103/157 (65%), Positives = 117/157 (74%), Gaps = 3/157 (1%) Frame = +3 Query: 132 NKRNDST--LFSHRFGLAPGSLRRNNSRLLSMAHEETSKSLVLESFKQRRVPIFVMMPVD 305 N RN S LF H S+ NN + SM E S+S LE+ +RVPIFVMMPVD Sbjct: 33 NLRNVSMIPLFKHNGLFIWRSIAANNC-IFSMDAREKSRSTTLETPGHKRVPIFVMMPVD 91 Query: 306 ALGIDTSGVPQIRKVKALTMSLKALKLAGVHGITVEVWWGIVERCSPFDYNWSVYEQLFK 485 + GIDTSG P+IR++KALT+SLKALKLAGVHGI VEVWWGIVER SPF YNWS+YE+LFK Sbjct: 92 SFGIDTSGAPRIRRIKALTISLKALKLAGVHGIAVEVWWGIVERFSPFVYNWSLYEELFK 151 Query: 486 LISGSGLKLHVSLCFHSN-EQSFNWKGGVSLPLWILE 593 LIS SGLKLHV+L FHSN S KGGVSLPLWI+E Sbjct: 152 LISESGLKLHVALSFHSNMHSSSRVKGGVSLPLWIVE 188 >ref|XP_002864407.1| beta-amylase 6 [Arabidopsis lyrata subsp. lyrata] gi|297310242|gb|EFH40666.1| beta-amylase 6 [Arabidopsis lyrata subsp. lyrata] Length = 531 Score = 185 bits (469), Expect = 6e-45 Identities = 87/131 (66%), Positives = 105/131 (80%) Frame = +3 Query: 201 NSRLLSMAHEETSKSLVLESFKQRRVPIFVMMPVDALGIDTSGVPQIRKVKALTMSLKAL 380 NSR+ SM E S+S VL S + +RVP+FVMMP D GID SG P+I+++KALT+SLKAL Sbjct: 67 NSRIFSMDAREKSRSFVLVSSRHKRVPVFVMMPFDTFGIDASGCPKIKRLKALTVSLKAL 126 Query: 381 KLAGVHGITVEVWWGIVERCSPFDYNWSVYEQLFKLISGSGLKLHVSLCFHSNEQSFNWK 560 KLAGVHGI VEVWWGIVER P ++ WS+YE+LF+LIS +GLKLHV+LCFHSN F K Sbjct: 127 KLAGVHGIAVEVWWGIVERFCPLEFKWSLYEELFRLISEAGLKLHVALCFHSNMHLFGGK 186 Query: 561 GGVSLPLWILE 593 GG+SLPLWI E Sbjct: 187 GGISLPLWIRE 197