BLASTX nr result

ID: Coptis23_contig00030529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030529
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK76508.1| putative beta-amylase [Arabidopsis thaliana] gi|2...   188   5e-46
ref|NP_568829.2| inactive beta-amylase 4 [Arabidopsis thaliana] ...   188   5e-46
dbj|BAH20280.1| AT5G55700 [Arabidopsis thaliana]                      188   5e-46
ref|XP_002265698.1| PREDICTED: inactive beta-amylase 4, chloropl...   188   7e-46
ref|XP_002864407.1| beta-amylase 6 [Arabidopsis lyrata subsp. ly...   185   6e-45

>gb|AAK76508.1| putative beta-amylase [Arabidopsis thaliana]
           gi|25054836|gb|AAN71908.1| putative beta-amylase
           [Arabidopsis thaliana]
          Length = 484

 Score =  188 bits (478), Expect = 5e-46
 Identities = 88/131 (67%), Positives = 107/131 (81%)
 Frame = +3

Query: 201 NSRLLSMAHEETSKSLVLESFKQRRVPIFVMMPVDALGIDTSGVPQIRKVKALTMSLKAL 380
           NSR+ SM   E S+S VL S + +RVP+FVMMP+D  GID SG P+I+++KALT+SLKAL
Sbjct: 20  NSRIFSMDAREKSRSFVLVSSRHKRVPVFVMMPIDTFGIDASGCPKIKRLKALTVSLKAL 79

Query: 381 KLAGVHGITVEVWWGIVERCSPFDYNWSVYEQLFKLISGSGLKLHVSLCFHSNEQSFNWK 560
           KLAGVHGI VEVWWGIVER SP ++ WS+YE+LF+LIS +GLKLHV+LCFHSN   F  K
Sbjct: 80  KLAGVHGIAVEVWWGIVERFSPLEFKWSLYEELFRLISEAGLKLHVALCFHSNMHLFGGK 139

Query: 561 GGVSLPLWILE 593
           GG+SLPLWI E
Sbjct: 140 GGISLPLWIRE 150


>ref|NP_568829.2| inactive beta-amylase 4 [Arabidopsis thaliana]
           gi|75334054|sp|Q9FM68.1|BAM4_ARATH RecName:
           Full=Inactive beta-amylase 4, chloroplastic; AltName:
           Full=Inactive beta-amylase 6; Flags: Precursor
           gi|9758604|dbj|BAB09237.1| beta-amylase [Arabidopsis
           thaliana] gi|332009286|gb|AED96669.1| inactive
           beta-amylase 4 [Arabidopsis thaliana]
          Length = 531

 Score =  188 bits (478), Expect = 5e-46
 Identities = 88/131 (67%), Positives = 107/131 (81%)
 Frame = +3

Query: 201 NSRLLSMAHEETSKSLVLESFKQRRVPIFVMMPVDALGIDTSGVPQIRKVKALTMSLKAL 380
           NSR+ SM   E S+S VL S + +RVP+FVMMP+D  GID SG P+I+++KALT+SLKAL
Sbjct: 67  NSRIFSMDAREKSRSFVLVSSRHKRVPVFVMMPIDTFGIDASGCPKIKRLKALTVSLKAL 126

Query: 381 KLAGVHGITVEVWWGIVERCSPFDYNWSVYEQLFKLISGSGLKLHVSLCFHSNEQSFNWK 560
           KLAGVHGI VEVWWGIVER SP ++ WS+YE+LF+LIS +GLKLHV+LCFHSN   F  K
Sbjct: 127 KLAGVHGIAVEVWWGIVERFSPLEFKWSLYEELFRLISEAGLKLHVALCFHSNMHLFGGK 186

Query: 561 GGVSLPLWILE 593
           GG+SLPLWI E
Sbjct: 187 GGISLPLWIRE 197


>dbj|BAH20280.1| AT5G55700 [Arabidopsis thaliana]
          Length = 498

 Score =  188 bits (478), Expect = 5e-46
 Identities = 88/131 (67%), Positives = 107/131 (81%)
 Frame = +3

Query: 201 NSRLLSMAHEETSKSLVLESFKQRRVPIFVMMPVDALGIDTSGVPQIRKVKALTMSLKAL 380
           NSR+ SM   E S+S VL S + +RVP+FVMMP+D  GID SG P+I+++KALT+SLKAL
Sbjct: 34  NSRIFSMDAREKSRSFVLVSSRHKRVPVFVMMPIDTFGIDASGCPKIKRLKALTVSLKAL 93

Query: 381 KLAGVHGITVEVWWGIVERCSPFDYNWSVYEQLFKLISGSGLKLHVSLCFHSNEQSFNWK 560
           KLAGVHGI VEVWWGIVER SP ++ WS+YE+LF+LIS +GLKLHV+LCFHSN   F  K
Sbjct: 94  KLAGVHGIAVEVWWGIVERFSPLEFKWSLYEELFRLISEAGLKLHVALCFHSNMHLFGGK 153

Query: 561 GGVSLPLWILE 593
           GG+SLPLWI E
Sbjct: 154 GGISLPLWIRE 164


>ref|XP_002265698.1| PREDICTED: inactive beta-amylase 4, chloroplastic [Vitis vinifera]
           gi|296089917|emb|CBI39736.3| unnamed protein product
           [Vitis vinifera]
          Length = 522

 Score =  188 bits (477), Expect = 7e-46
 Identities = 103/157 (65%), Positives = 117/157 (74%), Gaps = 3/157 (1%)
 Frame = +3

Query: 132 NKRNDST--LFSHRFGLAPGSLRRNNSRLLSMAHEETSKSLVLESFKQRRVPIFVMMPVD 305
           N RN S   LF H       S+  NN  + SM   E S+S  LE+   +RVPIFVMMPVD
Sbjct: 33  NLRNVSMIPLFKHNGLFIWRSIAANNC-IFSMDAREKSRSTTLETPGHKRVPIFVMMPVD 91

Query: 306 ALGIDTSGVPQIRKVKALTMSLKALKLAGVHGITVEVWWGIVERCSPFDYNWSVYEQLFK 485
           + GIDTSG P+IR++KALT+SLKALKLAGVHGI VEVWWGIVER SPF YNWS+YE+LFK
Sbjct: 92  SFGIDTSGAPRIRRIKALTISLKALKLAGVHGIAVEVWWGIVERFSPFVYNWSLYEELFK 151

Query: 486 LISGSGLKLHVSLCFHSN-EQSFNWKGGVSLPLWILE 593
           LIS SGLKLHV+L FHSN   S   KGGVSLPLWI+E
Sbjct: 152 LISESGLKLHVALSFHSNMHSSSRVKGGVSLPLWIVE 188


>ref|XP_002864407.1| beta-amylase 6 [Arabidopsis lyrata subsp. lyrata]
           gi|297310242|gb|EFH40666.1| beta-amylase 6 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 531

 Score =  185 bits (469), Expect = 6e-45
 Identities = 87/131 (66%), Positives = 105/131 (80%)
 Frame = +3

Query: 201 NSRLLSMAHEETSKSLVLESFKQRRVPIFVMMPVDALGIDTSGVPQIRKVKALTMSLKAL 380
           NSR+ SM   E S+S VL S + +RVP+FVMMP D  GID SG P+I+++KALT+SLKAL
Sbjct: 67  NSRIFSMDAREKSRSFVLVSSRHKRVPVFVMMPFDTFGIDASGCPKIKRLKALTVSLKAL 126

Query: 381 KLAGVHGITVEVWWGIVERCSPFDYNWSVYEQLFKLISGSGLKLHVSLCFHSNEQSFNWK 560
           KLAGVHGI VEVWWGIVER  P ++ WS+YE+LF+LIS +GLKLHV+LCFHSN   F  K
Sbjct: 127 KLAGVHGIAVEVWWGIVERFCPLEFKWSLYEELFRLISEAGLKLHVALCFHSNMHLFGGK 186

Query: 561 GGVSLPLWILE 593
           GG+SLPLWI E
Sbjct: 187 GGISLPLWIRE 197


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