BLASTX nr result

ID: Coptis23_contig00030519 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030519
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265157.2| PREDICTED: uncharacterized protein LOC100257...    89   3e-16
ref|XP_002298449.1| predicted protein [Populus trichocarpa] gi|2...    82   5e-14
ref|XP_003534489.1| PREDICTED: multiple C2 and transmembrane dom...    75   6e-12
ref|XP_004161406.1| PREDICTED: LOW QUALITY PROTEIN: multiple C2 ...    71   9e-11
ref|XP_004149608.1| PREDICTED: multiple C2 and transmembrane dom...    71   9e-11

>ref|XP_002265157.2| PREDICTED: uncharacterized protein LOC100257873 [Vitis vinifera]
          Length = 1046

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 49/114 (42%), Positives = 67/114 (58%)
 Frame = -3

Query: 345 SAPEVTDTSKAAVSNTKPSPPKPAIDNSSGATSAAKISVEVIKESNEVKVETAQYIHKHQ 166
           S+P +T  S       K S P P  ++   +    K   E IKE  EV+VE   +I+K+Q
Sbjct: 177 SSPSITRVSLIE----KSSSPIPEAESPRSSVEEPK---EEIKEPVEVRVEANPHIYKYQ 229

Query: 165 TSSYQPGISVERRPEGVPSTMQQMNPQIHTNRQEDFKLKDTSPRLGERWPNGGI 4
               QP ISVE+ P+G+ STM Q NP IH + Q+D+ LK+  P+LGERWP GG+
Sbjct: 230 VLQ-QPAISVEKGPQGISSTMHQANPDIHPSPQDDYNLKEMDPQLGERWPGGGV 282


>ref|XP_002298449.1| predicted protein [Populus trichocarpa] gi|222845707|gb|EEE83254.1|
           predicted protein [Populus trichocarpa]
          Length = 1051

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 45/110 (40%), Positives = 62/110 (56%)
 Frame = -3

Query: 336 EVTDTSKAAVSNTKPSPPKPAIDNSSGATSAAKISVEVIKESNEVKVETAQYIHKHQTSS 157
           E+  TS+A     +P     AI  +SG   A K      KE  +++ +T Q++HKHQ   
Sbjct: 181 EILHTSEAITE--QPGKKISAISETSGGFPA-KEPKNSNKEPTKIRADTTQHVHKHQVLQ 237

Query: 156 YQPGISVERRPEGVPSTMQQMNPQIHTNRQEDFKLKDTSPRLGERWPNGG 7
            +   SVE+ P G P TM   NP  H++  +DF LKDT P+LGERWP+GG
Sbjct: 238 -KTSQSVEKLPNGAPYTMHAANPSAHSSDLDDFNLKDTDPQLGERWPSGG 286


>ref|XP_003534489.1| PREDICTED: multiple C2 and transmembrane domain-containing protein
           2-like [Glycine max]
          Length = 1060

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 50/132 (37%), Positives = 73/132 (55%), Gaps = 13/132 (9%)
 Frame = -3

Query: 363 LSVPKTSAPE-VTD-TSKAAVSNTKPS--PPKPAIDNSS------GATSAAKISVEVIKE 214
           L  P  S P  +TD T +A +S   P+   PK + + +         +S+  I  E  KE
Sbjct: 164 LPPPPHSIPSGLTDRTLEADLSEELPAFDTPKASTEEAEVYYVAEARSSSVDIDQEPKKE 223

Query: 213 SNEVKVETAQYIHKHQTSSYQPGISVERRPEGVPSTMQQMNPQI---HTNRQEDFKLKDT 43
           + E  VET Q + KHQ    Q  IS++RRP+G PSTM  ++PQ+   H +  E++ L DT
Sbjct: 224 NREAVVETVQQLDKHQVLQPQT-ISIKRRPQGTPSTMHSVDPQVQSSHPSNDENYNLSDT 282

Query: 42  SPRLGERWPNGG 7
           + +LGERWP+ G
Sbjct: 283 NVQLGERWPSDG 294


>ref|XP_004161406.1| PREDICTED: LOW QUALITY PROTEIN: multiple C2 and transmembrane
           domain-containing protein 2-like [Cucumis sativus]
          Length = 1055

 Score = 71.2 bits (173), Expect = 9e-11
 Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 21/130 (16%)
 Frame = -3

Query: 333 VTDTSKAAVSNTKPSPPKPAIDNSSGATSAAKISV-------------EVIKESNEVKVE 193
           VT      VS+ +  P K  +  S    S + + V             E I+E  E + E
Sbjct: 163 VTKADGVPVSDIQEEPKKDVLKISPSKDSNSTLPVVEFRIEDPAKEPKEEIEEPIEARQE 222

Query: 192 TAQYIHKHQTSSYQPGISVERRPEG--------VPSTMQQMNPQIHTNRQEDFKLKDTSP 37
           T Q +HK QT   +P I V+RRP+G        +P TM   N + +++ Q+D++++DT+P
Sbjct: 223 TTQ-LHKQQTMQ-RPRIVVQRRPQGASSSMNRSIPPTMNTSNSEANSSNQDDYEIRDTNP 280

Query: 36  RLGERWPNGG 7
           +LGE+WPNGG
Sbjct: 281 QLGEQWPNGG 290


>ref|XP_004149608.1| PREDICTED: multiple C2 and transmembrane domain-containing protein
           2-like [Cucumis sativus]
          Length = 1055

 Score = 71.2 bits (173), Expect = 9e-11
 Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 21/130 (16%)
 Frame = -3

Query: 333 VTDTSKAAVSNTKPSPPKPAIDNSSGATSAAKISV-------------EVIKESNEVKVE 193
           VT      VS+ +  P K  +  S    S + + V             E I+E  E + E
Sbjct: 163 VTKADGVPVSDIQEEPKKDVLKISPSKDSNSTLPVVEFRIEDPAKEPKEEIEEPIEARQE 222

Query: 192 TAQYIHKHQTSSYQPGISVERRPEG--------VPSTMQQMNPQIHTNRQEDFKLKDTSP 37
           T Q +HK QT   +P I V+RRP+G        +P TM   N + +++ Q+D++++DT+P
Sbjct: 223 TTQ-LHKQQTMQ-RPRIVVQRRPQGASSSMNRSIPPTMNTSNSEANSSNQDDYEIRDTNP 280

Query: 36  RLGERWPNGG 7
           +LGE+WPNGG
Sbjct: 281 QLGEQWPNGG 290


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