BLASTX nr result

ID: Coptis23_contig00030517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030517
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29711.3| unnamed protein product [Vitis vinifera]              142   3e-32
ref|XP_002526458.1| conserved hypothetical protein [Ricinus comm...   140   1e-31
ref|XP_002869724.1| hypothetical protein ARALYDRAFT_492419 [Arab...   135   5e-30
ref|NP_194162.1| uncharacterized protein [Arabidopsis thaliana] ...   132   4e-29
ref|XP_002882229.1| hypothetical protein ARALYDRAFT_896211 [Arab...   130   1e-28

>emb|CBI29711.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score =  142 bits (358), Expect = 3e-32
 Identities = 67/101 (66%), Positives = 82/101 (81%), Gaps = 3/101 (2%)
 Frame = -1

Query: 397 LLTFKGMWLFEYPMMS---TSVPDLSKYQLRVIDGVHAVLSVFVFMAIALRDANVLKCFC 227
           + TFKG+WLF+Y   S    S+PDLSKY+ R IDGVHAVLSV VF+A+A+RD NV+ CF 
Sbjct: 135 IATFKGLWLFDYVDESGSAASLPDLSKYKFRFIDGVHAVLSVLVFVAVAMRDKNVVSCFY 194

Query: 226 PQPEQETTQILNVAPVGIGLICSLLFVVFPTRRHGIGYPVS 104
           PQP +E  ++L++ PVGIGLICSLLFVVFPT RHGIGYPV+
Sbjct: 195 PQPAREVQEVLDIVPVGIGLICSLLFVVFPTTRHGIGYPVT 235


>ref|XP_002526458.1| conserved hypothetical protein [Ricinus communis]
           gi|223534238|gb|EEF35953.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 230

 Score =  140 bits (352), Expect = 1e-31
 Identities = 66/100 (66%), Positives = 83/100 (83%), Gaps = 1/100 (1%)
 Frame = -1

Query: 397 LLTFKGMWLFEYP-MMSTSVPDLSKYQLRVIDGVHAVLSVFVFMAIALRDANVLKCFCPQ 221
           + TFKG++LF+ P  +   + DLSKY++R IDGVH+VLSV VF+A ALRD NV+ CF P 
Sbjct: 129 IATFKGIFLFDCPDPVGAGLKDLSKYKIRFIDGVHSVLSVLVFIAFALRDKNVVSCFYPM 188

Query: 220 PEQETTQILNVAPVGIGLICSLLFVVFPTRRHGIGYPVSS 101
           P+ ET ++LN+APVGIGLICSLLFVVFPTRRHGIGYPV++
Sbjct: 189 PKHETQEVLNIAPVGIGLICSLLFVVFPTRRHGIGYPVTA 228


>ref|XP_002869724.1| hypothetical protein ARALYDRAFT_492419 [Arabidopsis lyrata subsp.
           lyrata] gi|297315560|gb|EFH45983.1| hypothetical protein
           ARALYDRAFT_492419 [Arabidopsis lyrata subsp. lyrata]
          Length = 213

 Score =  135 bits (339), Expect = 5e-30
 Identities = 60/99 (60%), Positives = 79/99 (79%), Gaps = 1/99 (1%)
 Frame = -1

Query: 391 TFKGMWLFEYPMMS-TSVPDLSKYQLRVIDGVHAVLSVFVFMAIALRDANVLKCFCPQPE 215
           T KGMW+F+YP      +PDLSKY++R+ID +HAVLSV VF A+ALRD N + CF P PE
Sbjct: 111 TRKGMWIFDYPDPDGLGLPDLSKYRIRIIDWIHAVLSVLVFGAVALRDKNAVSCFYPAPE 170

Query: 214 QETTQILNVAPVGIGLICSLLFVVFPTRRHGIGYPVSSE 98
           QET ++L++ P+G+G+IC LLF+VFP RRHGIGYPV+ +
Sbjct: 171 QETKKVLDIVPMGVGVICGLLFLVFPARRHGIGYPVTGD 209


>ref|NP_194162.1| uncharacterized protein [Arabidopsis thaliana]
           gi|5051773|emb|CAB45066.1| putative protein [Arabidopsis
           thaliana] gi|7269281|emb|CAB79341.1| putative protein
           [Arabidopsis thaliana] gi|28466871|gb|AAO44044.1|
           At4g24310 [Arabidopsis thaliana]
           gi|110736143|dbj|BAF00043.1| hypothetical protein
           [Arabidopsis thaliana] gi|332659488|gb|AEE84888.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 213

 Score =  132 bits (331), Expect = 4e-29
 Identities = 58/99 (58%), Positives = 79/99 (79%), Gaps = 1/99 (1%)
 Frame = -1

Query: 391 TFKGMWLFEYPMMS-TSVPDLSKYQLRVIDGVHAVLSVFVFMAIALRDANVLKCFCPQPE 215
           T KGMW+F+YP      +P+LSKY++R+ID +HAVLSV VF A+ALRD N + CF P PE
Sbjct: 111 TRKGMWVFDYPDPDGLGLPNLSKYRIRIIDWIHAVLSVLVFGAVALRDKNAVSCFYPAPE 170

Query: 214 QETTQILNVAPVGIGLICSLLFVVFPTRRHGIGYPVSSE 98
           QET ++L++ P+G+G+IC +LF+VFP RRHGIGYPV+ +
Sbjct: 171 QETKKVLDIVPMGVGVICGMLFLVFPARRHGIGYPVTGD 209


>ref|XP_002882229.1| hypothetical protein ARALYDRAFT_896211 [Arabidopsis lyrata subsp.
           lyrata] gi|297328069|gb|EFH58488.1| hypothetical protein
           ARALYDRAFT_896211 [Arabidopsis lyrata subsp. lyrata]
          Length = 219

 Score =  130 bits (327), Expect = 1e-28
 Identities = 58/98 (59%), Positives = 77/98 (78%), Gaps = 1/98 (1%)
 Frame = -1

Query: 394 LTFKGMWLFEYPMMS-TSVPDLSKYQLRVIDGVHAVLSVFVFMAIALRDANVLKCFCPQP 218
           +TFKGMW+ +YP  S   +PDL+KY++RV+D +HA LSV VF A+ALRD  +  CFCP P
Sbjct: 116 VTFKGMWVVDYPDPSGLGLPDLAKYRMRVVDWIHATLSVLVFGAVALRDKYITDCFCPSP 175

Query: 217 EQETTQILNVAPVGIGLICSLLFVVFPTRRHGIGYPVS 104
           E ET  +L++ PVG+G++CSLLF+VFP RRHGIGY V+
Sbjct: 176 EAETKHVLDIVPVGVGVMCSLLFMVFPARRHGIGYLVT 213


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