BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030512
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat...   123   1e-26
ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat...   120   1e-25
ref|XP_002511572.1| pentatricopeptide repeat-containing protein,...   116   2e-24
ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   113   2e-23
ref|XP_002316516.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22

>ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  123 bits (309), Expect = 1e-26
 Identities = 63/87 (72%), Positives = 71/87 (81%), Gaps = 7/87 (8%)
 Frame = +3

Query: 3   CVNHRVSDAVGIIHLMVAKGIVPEIVNTIFESDKKNVAAPKIVVEDLLKKGHINYYSYEL 182
           CV  +V +AVGIIHLM+ KGIVPE VNTIFE+DKK VAAPKI+VEDLLKKGHI YY+YEL
Sbjct: 657 CVKDKVHEAVGIIHLMLQKGIVPETVNTIFEADKKVVAAPKILVEDLLKKGHIAYYTYEL 716

Query: 183 LYDGIRDKKLLKKK-------HRGRVS 242
           LYDGIRDKK+LKK+       HRG  S
Sbjct: 717 LYDGIRDKKILKKRLPTVNSLHRGASS 743


>ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera] gi|297733985|emb|CBI15232.3|
           unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  120 bits (300), Expect = 1e-25
 Identities = 56/74 (75%), Positives = 67/74 (90%)
 Frame = +3

Query: 3   CVNHRVSDAVGIIHLMVAKGIVPEIVNTIFESDKKNVAAPKIVVEDLLKKGHINYYSYEL 182
           C+  RV +AVGIIHLMV KGIVPE+VNTIFE+DKK VAAPKIVVE+L+KKGHI Y++YE+
Sbjct: 682 CLKRRVHEAVGIIHLMVHKGIVPEVVNTIFEADKKEVAAPKIVVENLMKKGHITYFAYEI 741

Query: 183 LYDGIRDKKLLKKK 224
           L+DGIRDKKL +KK
Sbjct: 742 LHDGIRDKKLSRKK 755


>ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550687|gb|EEF52174.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 735

 Score =  116 bits (290), Expect = 2e-24
 Identities = 55/74 (74%), Positives = 63/74 (85%)
 Frame = +3

Query: 3   CVNHRVSDAVGIIHLMVAKGIVPEIVNTIFESDKKNVAAPKIVVEDLLKKGHINYYSYEL 182
           CV HRV +AVGI+HLMV  G+VPE V TIF++DKK VAAPKI+VEDLLKK HI YY+YEL
Sbjct: 655 CVQHRVHEAVGIVHLMVRTGVVPEAVVTIFDADKKAVAAPKIIVEDLLKKSHITYYAYEL 714

Query: 183 LYDGIRDKKLLKKK 224
           LYDGIR+KKL K K
Sbjct: 715 LYDGIRNKKLQKNK 728


>ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  113 bits (282), Expect = 2e-23
 Identities = 57/79 (72%), Positives = 66/79 (83%)
 Frame = +3

Query: 3   CVNHRVSDAVGIIHLMVAKGIVPEIVNTIFESDKKNVAAPKIVVEDLLKKGHINYYSYEL 182
           CV HR+S+AV II+LMV  GIVPE VN+IFE+DKK VAAPKIVVE LLKK HI YYSYEL
Sbjct: 683 CVTHRLSEAVVIINLMVQNGIVPEEVNSIFEADKKEVAAPKIVVEYLLKKSHITYYSYEL 742

Query: 183 LYDGIRDKKLLKKKHRGRV 239
           LYDGIR++KL  KK + +V
Sbjct: 743 LYDGIRNRKLDNKKFKRKV 761


>ref|XP_002316516.1| predicted protein [Populus trichocarpa] gi|222865556|gb|EEF02687.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score =  109 bits (272), Expect = 3e-22
 Identities = 54/74 (72%), Positives = 61/74 (82%)
 Frame = +3

Query: 3   CVNHRVSDAVGIIHLMVAKGIVPEIVNTIFESDKKNVAAPKIVVEDLLKKGHINYYSYEL 182
           CV HRV +AV IIH MV  GIVPE+VN+I E+DKK VAAPKIVVEDLLK+  I YY+YEL
Sbjct: 683 CVQHRVHEAVDIIHFMVHNGIVPEVVNSISEADKKVVAAPKIVVEDLLKRSCITYYAYEL 742

Query: 183 LYDGIRDKKLLKKK 224
           LYDGIRDKK  K+K
Sbjct: 743 LYDGIRDKKTQKQK 756