BLASTX nr result

ID: Coptis23_contig00030511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030511
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27547.3| unnamed protein product [Vitis vinifera]              170   1e-40
ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3...   170   1e-40
ref|XP_002315633.1| multidrug resistance protein ABC transporter...   162   3e-38
dbj|BAB90531.1| putative MRP-like ABC transporter [Oryza sativa ...   161   4e-38
ref|NP_001172697.1| Os01g0902100 [Oryza sativa Japonica Group] g...   161   4e-38

>emb|CBI27547.3| unnamed protein product [Vitis vinifera]
          Length = 1363

 Score =  170 bits (431), Expect = 1e-40
 Identities = 84/123 (68%), Positives = 91/123 (73%)
 Frame = +3

Query: 96   LAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFSSIPSEAPFNIEGYRPDQCWPMNG 275
            LAATYGLNLNVLQAWVIWNLCNVENKMISVERILQF+ IPSEAP  IE  RP   WP NG
Sbjct: 1056 LAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTKIPSEAPLVIENCRPSLEWPSNG 1115

Query: 276  TVEFDNLHVQYNPLLPMILKGISCTFPXXXXXXXXXXXXXXXXXLIQTLFRVVEPSNGKI 455
             ++ DNLHV+Y P LPM+LKGI+CTFP                 LIQ LFRVVEPS G+I
Sbjct: 1116 RIDLDNLHVRYTPTLPMVLKGITCTFPGERKIGVVGRTGSGKSTLIQALFRVVEPSEGQI 1175

Query: 456  LID 464
            LID
Sbjct: 1176 LID 1178


>ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1462

 Score =  170 bits (431), Expect = 1e-40
 Identities = 84/123 (68%), Positives = 91/123 (73%)
 Frame = +3

Query: 96   LAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFSSIPSEAPFNIEGYRPDQCWPMNG 275
            LAATYGLNLNVLQAWVIWNLCNVENKMISVERILQF+ IPSEAP  IE  RP   WP NG
Sbjct: 1155 LAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTKIPSEAPLVIENCRPSLEWPSNG 1214

Query: 276  TVEFDNLHVQYNPLLPMILKGISCTFPXXXXXXXXXXXXXXXXXLIQTLFRVVEPSNGKI 455
             ++ DNLHV+Y P LPM+LKGI+CTFP                 LIQ LFRVVEPS G+I
Sbjct: 1215 RIDLDNLHVRYTPTLPMVLKGITCTFPGERKIGVVGRTGSGKSTLIQALFRVVEPSEGQI 1274

Query: 456  LID 464
            LID
Sbjct: 1275 LID 1277


>ref|XP_002315633.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222864673|gb|EEF01804.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1044

 Score =  162 bits (409), Expect = 3e-38
 Identities = 80/123 (65%), Positives = 91/123 (73%)
 Frame = +3

Query: 96   LAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFSSIPSEAPFNIEGYRPDQCWPMNG 275
            LAATYGLNLNVLQ+WVIWNLCNVENKMISVERILQF++IPSEAP  IE   P   WP++G
Sbjct: 740  LAATYGLNLNVLQSWVIWNLCNVENKMISVERILQFTNIPSEAPLVIEDCGPKPEWPVDG 799

Query: 276  TVEFDNLHVQYNPLLPMILKGISCTFPXXXXXXXXXXXXXXXXXLIQTLFRVVEPSNGKI 455
             +E  +LHVQY P LPM+LKGI+CTFP                 LIQ LFRV+EPS G+I
Sbjct: 800  RIELISLHVQYGPSLPMVLKGITCTFPGGKKIGVVGRTGSGKSTLIQALFRVIEPSGGQI 859

Query: 456  LID 464
            LID
Sbjct: 860  LID 862


>dbj|BAB90531.1| putative MRP-like ABC transporter [Oryza sativa Japonica Group]
            gi|27368889|emb|CAD59602.1| MRP-like ABC transporter
            [Oryza sativa Japonica Group]
          Length = 1386

 Score =  161 bits (408), Expect = 4e-38
 Identities = 80/123 (65%), Positives = 90/123 (73%)
 Frame = +3

Query: 96   LAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFSSIPSEAPFNIEGYRPDQCWPMNG 275
            LAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFS+I SEAP  IE  RP + WP  G
Sbjct: 1084 LAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFSNITSEAPLVIEDCRPRESWPWCG 1143

Query: 276  TVEFDNLHVQYNPLLPMILKGISCTFPXXXXXXXXXXXXXXXXXLIQTLFRVVEPSNGKI 455
            T++ D+L V+YNP +PM+LKGISCT P                 LI  LFR+VEPS G+I
Sbjct: 1144 TIQIDSLQVRYNPDMPMVLKGISCTIPGERKIGVVGRTGSGKSTLIHALFRIVEPSEGRI 1203

Query: 456  LID 464
            LID
Sbjct: 1204 LID 1206


>ref|NP_001172697.1| Os01g0902100 [Oryza sativa Japonica Group]
           gi|255673971|dbj|BAH91427.1| Os01g0902100 [Oryza sativa
           Japonica Group]
          Length = 293

 Score =  161 bits (408), Expect = 4e-38
 Identities = 80/123 (65%), Positives = 90/123 (73%)
 Frame = +3

Query: 96  LAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFSSIPSEAPFNIEGYRPDQCWPMNG 275
           LAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFS+I SEAP  IE  RP + WP  G
Sbjct: 120 LAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFSNITSEAPLVIEDCRPRESWPWCG 179

Query: 276 TVEFDNLHVQYNPLLPMILKGISCTFPXXXXXXXXXXXXXXXXXLIQTLFRVVEPSNGKI 455
           T++ D+L V+YNP +PM+LKGISCT P                 LI  LFR+VEPS G+I
Sbjct: 180 TIQIDSLQVRYNPDMPMVLKGISCTIPGERKIGVVGRTGSGKSTLIHALFRIVEPSEGRI 239

Query: 456 LID 464
           LID
Sbjct: 240 LID 242


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