BLASTX nr result

ID: Coptis23_contig00030490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030490
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527054.1| PREDICTED: dnaJ homolog subfamily B member 1...   125   5e-27
ref|XP_003520472.1| PREDICTED: dnaJ homolog subfamily B member 1...   123   1e-26
ref|XP_002311874.1| predicted protein [Populus trichocarpa] gi|2...   123   1e-26
gb|ABK94880.1| unknown [Populus trichocarpa]                          123   1e-26
ref|XP_002528086.1| Protein SIS1, putative [Ricinus communis] gi...   123   2e-26

>ref|XP_003527054.1| PREDICTED: dnaJ homolog subfamily B member 13-like isoform 1
           [Glycine max]
          Length = 351

 Score =  125 bits (313), Expect = 5e-27
 Identities = 57/73 (78%), Positives = 64/73 (87%)
 Frame = -1

Query: 221 KMRISRTVADMYGKPGTEEEILTIDVKPGWKKGTKITFPEKGNREHGVVPGDLVFVIDEK 42
           KM+ISR V D +GK G  EEILTI++KPGWKKGTKITFPEKGNRE GV+P DL+FVIDEK
Sbjct: 192 KMKISRNVYDAFGKCGDVEEILTIEIKPGWKKGTKITFPEKGNREPGVIPADLIFVIDEK 251

Query: 41  PHGVYRRDGNDLV 3
           PH +YRRDGNDLV
Sbjct: 252 PHALYRRDGNDLV 264


>ref|XP_003520472.1| PREDICTED: dnaJ homolog subfamily B member 13-like isoform 1
           [Glycine max]
          Length = 337

 Score =  123 bits (309), Expect = 1e-26
 Identities = 55/73 (75%), Positives = 64/73 (87%)
 Frame = -1

Query: 221 KMRISRTVADMYGKPGTEEEILTIDVKPGWKKGTKITFPEKGNREHGVVPGDLVFVIDEK 42
           KM+ISR V D  G+P T EEILTI++KPGWKKGTKITFPEKGN + GV+P DLVF+IDEK
Sbjct: 180 KMKISRDVIDSSGRPTTVEEILTIEIKPGWKKGTKITFPEKGNEQRGVIPSDLVFIIDEK 239

Query: 41  PHGVYRRDGNDLV 3
           PHGV++RDGNDLV
Sbjct: 240 PHGVFKRDGNDLV 252


>ref|XP_002311874.1| predicted protein [Populus trichocarpa] gi|222851694|gb|EEE89241.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score =  123 bits (309), Expect = 1e-26
 Identities = 55/73 (75%), Positives = 64/73 (87%)
 Frame = -1

Query: 221 KMRISRTVADMYGKPGTEEEILTIDVKPGWKKGTKITFPEKGNREHGVVPGDLVFVIDEK 42
           KMRISR+V D +GKP T EEIL ID+KPGWKKGTKITFPEKGN+E G+ P DL+FV+DEK
Sbjct: 157 KMRISRSVPDDFGKPKTVEEILKIDIKPGWKKGTKITFPEKGNQEPGITPADLIFVVDEK 216

Query: 41  PHGVYRRDGNDLV 3
           PH V++RDGNDLV
Sbjct: 217 PHSVFKRDGNDLV 229


>gb|ABK94880.1| unknown [Populus trichocarpa]
          Length = 317

 Score =  123 bits (309), Expect = 1e-26
 Identities = 55/73 (75%), Positives = 64/73 (87%)
 Frame = -1

Query: 221 KMRISRTVADMYGKPGTEEEILTIDVKPGWKKGTKITFPEKGNREHGVVPGDLVFVIDEK 42
           KMRISR+V D +GKP T EEIL ID+KPGWKKGTKITFPEKGN+E G+ P DL+FV+DEK
Sbjct: 157 KMRISRSVPDDFGKPKTVEEILKIDIKPGWKKGTKITFPEKGNQEPGITPADLIFVVDEK 216

Query: 41  PHGVYRRDGNDLV 3
           PH V++RDGNDLV
Sbjct: 217 PHSVFKRDGNDLV 229


>ref|XP_002528086.1| Protein SIS1, putative [Ricinus communis]
           gi|223532475|gb|EEF34265.1| Protein SIS1, putative
           [Ricinus communis]
          Length = 339

 Score =  123 bits (308), Expect = 2e-26
 Identities = 54/73 (73%), Positives = 64/73 (87%)
 Frame = -1

Query: 221 KMRISRTVADMYGKPGTEEEILTIDVKPGWKKGTKITFPEKGNREHGVVPGDLVFVIDEK 42
           KM+ISR V D  G+P T EEILTI++KPGWKKGTKITFPEKGN + GV+P DLVF+IDEK
Sbjct: 181 KMKISRDVIDSSGRPTTVEEILTIEIKPGWKKGTKITFPEKGNEQRGVIPSDLVFIIDEK 240

Query: 41  PHGVYRRDGNDLV 3
           PHGV++RDGNDL+
Sbjct: 241 PHGVFKRDGNDLI 253


Top