BLASTX nr result

ID: Coptis23_contig00030487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030487
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511357.1| transcription factor, putative [Ricinus comm...   166   1e-39
emb|CBI14986.3| unnamed protein product [Vitis vinifera]              158   5e-37
ref|XP_002278337.1| PREDICTED: jmjC domain-containing protein 4-...   158   5e-37
ref|XP_004155086.1| PREDICTED: jmjC domain-containing protein 4-...   155   2e-36
ref|XP_004138273.1| PREDICTED: jmjC domain-containing protein 4-...   155   2e-36

>ref|XP_002511357.1| transcription factor, putative [Ricinus communis]
           gi|223550472|gb|EEF51959.1| transcription factor,
           putative [Ricinus communis]
          Length = 462

 Score =  166 bits (421), Expect = 1e-39
 Identities = 77/120 (64%), Positives = 98/120 (81%), Gaps = 7/120 (5%)
 Frame = -1

Query: 352 KMGVKVERVNGNEISYKEFTEKYLVKNEPVVLTGLMDDWKACKDWVTSDGKPNLNYFSTH 173
           ++G ++E+VNG E+SY EF E+YL KN+PVVLTGLMD+W+ACKDWVT DG PNL +FSTH
Sbjct: 4   EIGGRIEKVNGKELSYDEFVERYLSKNQPVVLTGLMDNWRACKDWVTDDGYPNLQFFSTH 63

Query: 172 FGKSLVQVAECNSRELREQKRVEMSVADFIKNWLD----NDES---LLLYLKDWHFVKEH 14
           FGKS VQVA+C +RE  +QKRVEM+V++FI +W++    N ES    LLYLKDWHFVKE+
Sbjct: 64  FGKSRVQVADCGTREFTDQKRVEMTVSEFIDHWIEYNASNHESNSKSLLYLKDWHFVKEY 123


>emb|CBI14986.3| unnamed protein product [Vitis vinifera]
          Length = 498

 Score =  158 bits (399), Expect = 5e-37
 Identities = 71/125 (56%), Positives = 95/125 (76%), Gaps = 12/125 (9%)
 Frame = -1

Query: 352 KMGVKVERVNGNEISYKEFTEKYLVKNEPVVLTGLMDDWKACKDWVTSDGKPNLNYFSTH 173
           ++G ++E+ NG+E+SY +F E+YL+KN PVVL GLMD W+ACKDWVT  G+PNL +FSTH
Sbjct: 4   RIGGEIEKENGDELSYSDFVERYLMKNRPVVLRGLMDGWRACKDWVTHTGQPNLEFFSTH 63

Query: 172 FGKSLVQVAECNSRELREQKRVEMSVADFIKNWLDNDESL------------LLYLKDWH 29
           FGKS+VQVA+C +RE  +QKR+EMSVA+FI +WL +  +             L+YLKDWH
Sbjct: 64  FGKSIVQVADCGTREFTDQKRMEMSVAEFIDHWLKDSANYHVNATTNEHGKPLVYLKDWH 123

Query: 28  FVKEH 14
           FVKE+
Sbjct: 124 FVKEY 128


>ref|XP_002278337.1| PREDICTED: jmjC domain-containing protein 4-like [Vitis vinifera]
          Length = 493

 Score =  158 bits (399), Expect = 5e-37
 Identities = 71/125 (56%), Positives = 95/125 (76%), Gaps = 12/125 (9%)
 Frame = -1

Query: 352 KMGVKVERVNGNEISYKEFTEKYLVKNEPVVLTGLMDDWKACKDWVTSDGKPNLNYFSTH 173
           ++G ++E+ NG+E+SY +F E+YL+KN PVVL GLMD W+ACKDWVT  G+PNL +FSTH
Sbjct: 4   RIGGEIEKENGDELSYSDFVERYLMKNRPVVLRGLMDGWRACKDWVTHTGQPNLEFFSTH 63

Query: 172 FGKSLVQVAECNSRELREQKRVEMSVADFIKNWLDNDESL------------LLYLKDWH 29
           FGKS+VQVA+C +RE  +QKR+EMSVA+FI +WL +  +             L+YLKDWH
Sbjct: 64  FGKSIVQVADCGTREFTDQKRMEMSVAEFIDHWLKDSANYHVNATTNEHGKPLVYLKDWH 123

Query: 28  FVKEH 14
           FVKE+
Sbjct: 124 FVKEY 128


>ref|XP_004155086.1| PREDICTED: jmjC domain-containing protein 4-like [Cucumis sativus]
          Length = 480

 Score =  155 bits (393), Expect = 2e-36
 Identities = 72/122 (59%), Positives = 94/122 (77%), Gaps = 13/122 (10%)
 Frame = -1

Query: 340 KVERVNGNEISYKEFTEKYLVKNEPVVLTGLMDDWKACKDWVTSDGKPNLNYFSTHFGKS 161
           K+++VNG  +SYKEF E+Y+ KN+PVVLTGLMDDWKAC DWV  +G+PNL++FSTHFGKS
Sbjct: 8   KIDKVNGKGLSYKEFVERYMEKNKPVVLTGLMDDWKACSDWVDENGQPNLSFFSTHFGKS 67

Query: 160 LVQVAECNSRELREQKRVEMSVADFIKNW---------LDNDESL----LLYLKDWHFVK 20
            VQVA+C+++E  +QKRVEMSV++FI  W         L ++  L    +LYLKDWHFVK
Sbjct: 68  RVQVADCSTKEFTDQKRVEMSVSEFIDQWCKEPIQEHGLSSNNGLTDKSVLYLKDWHFVK 127

Query: 19  EH 14
           E+
Sbjct: 128 EY 129


>ref|XP_004138273.1| PREDICTED: jmjC domain-containing protein 4-like [Cucumis sativus]
          Length = 480

 Score =  155 bits (393), Expect = 2e-36
 Identities = 72/122 (59%), Positives = 94/122 (77%), Gaps = 13/122 (10%)
 Frame = -1

Query: 340 KVERVNGNEISYKEFTEKYLVKNEPVVLTGLMDDWKACKDWVTSDGKPNLNYFSTHFGKS 161
           K+++VNG  +SYKEF E+Y+ KN+PVVLTGLMDDWKAC DWV  +G+PNL++FSTHFGKS
Sbjct: 8   KIDKVNGKGLSYKEFVERYMEKNKPVVLTGLMDDWKACSDWVDENGQPNLSFFSTHFGKS 67

Query: 160 LVQVAECNSRELREQKRVEMSVADFIKNW---------LDNDESL----LLYLKDWHFVK 20
            VQVA+C+++E  +QKRVEMSV++FI  W         L ++  L    +LYLKDWHFVK
Sbjct: 68  RVQVADCSTKEFTDQKRVEMSVSEFIDQWCKEPIQEHGLSSNNGLTDKSVLYLKDWHFVK 127

Query: 19  EH 14
           E+
Sbjct: 128 EY 129


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