BLASTX nr result

ID: Coptis23_contig00030485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030485
         (733 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300727.1| hypothetical protein POPTRDRAFT_643019 [Popu...   146   4e-33
ref|XP_002280631.2| PREDICTED: uncharacterized protein LOC100255...   144   2e-32
ref|XP_002307701.1| hypothetical protein POPTRDRAFT_73001 [Popul...   142   5e-32
emb|CBI19805.3| unnamed protein product [Vitis vinifera]              137   2e-30
ref|XP_002510487.1| lysine-specific histone demethylase, putativ...   135   9e-30

>ref|XP_002300727.1| hypothetical protein POPTRDRAFT_643019 [Populus trichocarpa]
            gi|222842453|gb|EEE80000.1| hypothetical protein
            POPTRDRAFT_643019 [Populus trichocarpa]
          Length = 1655

 Score =  146 bits (369), Expect = 4e-33
 Identities = 84/196 (42%), Positives = 112/196 (57%), Gaps = 4/196 (2%)
 Frame = +1

Query: 100  PFEKIKFKEILKRRGGLQEYLECRNFILGLWSKDTNHILCLSDCGATDAPSDIDPQRISL 279
            P EKIKFKE+LKR+GGLQEYLECRN IL LWSKD + IL L+DCG T+ PS  +  R SL
Sbjct: 624  PVEKIKFKEVLKRKGGLQEYLECRNRILCLWSKDISRILPLADCGVTETPSQDESPRASL 683

Query: 280  IREIYSFLDQNGYINVGIACEKEKSEPCGEADXXXXXXXXXXXXCGTQLSDSGCKAPFIL 459
            IR+IY FLDQ+GYIN GIA EKE++EP    +             G  ++D      FIL
Sbjct: 684  IRQIYGFLDQSGYINAGIASEKERAEPSTNHNYKLVEKKTFEGNSGASVADLEDGVSFIL 743

Query: 460  GQVEYPERLTDIKNGLILNEEEPISQTTKRKEFLGSENWSI----ESEGCQSTKEQKIGW 627
            GQV+  E   + KNG+ ++ ++  S+  K  E +      +    E E   +   Q+   
Sbjct: 744  GQVKSSENSLEPKNGVSVDNQDLASKALKSGELVTPMTPDLPNVMEYEELPAAGIQQNSA 803

Query: 628  IETKVPNRTADTDTLA 675
              +K+PN     D L+
Sbjct: 804  SNSKLPNGLVSLDPLS 819


>ref|XP_002280631.2| PREDICTED: uncharacterized protein LOC100255769 [Vitis vinifera]
          Length = 2145

 Score =  144 bits (362), Expect = 2e-32
 Identities = 78/154 (50%), Positives = 91/154 (59%)
 Frame = +1

Query: 4    RGKSKYPINMVLETEICXXXXXXXXXXXXXXXPFEKIKFKEILKRRGGLQEYLECRNFIL 183
            RGK    +NMV  T+                 P EKIKFKE+LKR+GGLQEYLECRN IL
Sbjct: 762  RGKFDSSLNMVSGTDNGGAAAVSVGLKARAVGPVEKIKFKEVLKRKGGLQEYLECRNLIL 821

Query: 184  GLWSKDTNHILCLSDCGATDAPSDIDPQRISLIREIYSFLDQNGYINVGIACEKEKSEPC 363
            GLW KD + IL L+DCG  D PS  +P R SLIREIY FLD  GYINVGIA EKEK++P 
Sbjct: 822  GLWGKDMSRILPLADCGVADTPSKDEPPRASLIREIYVFLDHRGYINVGIASEKEKADPD 881

Query: 364  GEADXXXXXXXXXXXXCGTQLSDSGCKAPFILGQ 465
             + +             G  ++DS     FILGQ
Sbjct: 882  SKHNYKLLKEKTFGEKSGIAIADSEDGVSFILGQ 915


>ref|XP_002307701.1| hypothetical protein POPTRDRAFT_73001 [Populus trichocarpa]
            gi|222857150|gb|EEE94697.1| hypothetical protein
            POPTRDRAFT_73001 [Populus trichocarpa]
          Length = 1669

 Score =  142 bits (359), Expect = 5e-32
 Identities = 81/193 (41%), Positives = 110/193 (56%), Gaps = 1/193 (0%)
 Frame = +1

Query: 100  PFEKIKFKEILKRRGGLQEYLECRNFILGLWSKDTNHILCLSDCGATDAPSDIDPQRISL 279
            P EKIKFKE+LKR+GGLQEYLECRN ILGLWSKD + IL L+DCG T+ PS  +  R SL
Sbjct: 632  PVEKIKFKEVLKRKGGLQEYLECRNRILGLWSKDVSRILPLADCGITETPSQNESPRASL 691

Query: 280  IREIYSFLDQNGYINVGIACEKEKSEPCGEADXXXXXXXXXXXXCGTQLSDSGCKAPFIL 459
            IR+IY FLDQ+GYIN GIA EKE +EP    +             G  ++D      FIL
Sbjct: 692  IRQIYEFLDQSGYINAGIASEKESAEPSANHNYKLVEEKTFEGNPGASVADLEDGVSFIL 751

Query: 460  GQVEYPERLTDIKNGLILNEEEPISQTTKRKEFLGSEN-WSIESEGCQSTKEQKIGWIET 636
            GQV+  +   + K+ + ++ ++   +  K  + +   N    E    +  K+  +    T
Sbjct: 752  GQVKSSQNSLEPKDRVPMDNQDLALKALKSGKLVDLPNVKECEEWPAEDIKQNSVS--NT 809

Query: 637  KVPNRTADTDTLA 675
            K+ N  A  D L+
Sbjct: 810  KLSNGLASLDALS 822


>emb|CBI19805.3| unnamed protein product [Vitis vinifera]
          Length = 771

 Score =  137 bits (345), Expect = 2e-30
 Identities = 73/144 (50%), Positives = 86/144 (59%)
 Frame = +1

Query: 4   RGKSKYPINMVLETEICXXXXXXXXXXXXXXXPFEKIKFKEILKRRGGLQEYLECRNFIL 183
           RGK    +NMV  T+                 P EKIKFKE+LKR+GGLQEYLECRN IL
Sbjct: 376 RGKFDSSLNMVSGTDNGGAAAVSVGLKARAVGPVEKIKFKEVLKRKGGLQEYLECRNLIL 435

Query: 184 GLWSKDTNHILCLSDCGATDAPSDIDPQRISLIREIYSFLDQNGYINVGIACEKEKSEPC 363
           GLW KD + IL L+DCG  D PS  +P R SLIREIY FLD  GYINVGIA EKEK++P 
Sbjct: 436 GLWGKDMSRILPLADCGVADTPSKDEPPRASLIREIYVFLDHRGYINVGIASEKEKADPD 495

Query: 364 GEADXXXXXXXXXXXXCGTQLSDS 435
            + +             G  ++DS
Sbjct: 496 SKHNYKLLKEKTFGEKSGIAIADS 519


>ref|XP_002510487.1| lysine-specific histone demethylase, putative [Ricinus communis]
            gi|223551188|gb|EEF52674.1| lysine-specific histone
            demethylase, putative [Ricinus communis]
          Length = 1947

 Score =  135 bits (340), Expect = 9e-30
 Identities = 71/124 (57%), Positives = 85/124 (68%)
 Frame = +1

Query: 100  PFEKIKFKEILKRRGGLQEYLECRNFILGLWSKDTNHILCLSDCGATDAPSDIDPQRISL 279
            P EKIKFKE+LKR+ GLQ YLECRN ILGLW+KD + IL LSDCG TD PS+ +  R SL
Sbjct: 699  PVEKIKFKEVLKRKCGLQGYLECRNQILGLWNKDVSRILPLSDCGVTDTPSEDESSRDSL 758

Query: 280  IREIYSFLDQNGYINVGIACEKEKSEPCGEADXXXXXXXXXXXXCGTQLSDSGCKAPFIL 459
            IREIY+FLDQ+GYINVGIA  KEK+EP  + +             G  ++D      FIL
Sbjct: 759  IREIYAFLDQSGYINVGIASNKEKAEPNVKHNYKLLEEKTFEVNPGASVADLEDGVSFIL 818

Query: 460  GQVE 471
            GQV+
Sbjct: 819  GQVK 822


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