BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030483
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32913.3| unnamed protein product [Vitis vinifera]               85   5e-15
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    85   5e-15
emb|CBI32919.3| unnamed protein product [Vitis vinifera]               84   1e-14
ref|XP_003596628.1| F-box/LRR-repeat protein [Medicago truncatul...    73   2e-11
ref|XP_003532284.1| PREDICTED: F-box/FBD/LRR-repeat protein At4g...    72   6e-11

>emb|CBI32913.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/77 (57%), Positives = 54/77 (70%), Gaps = 2/77 (2%)
 Frame = -2

Query: 227 GQNSGEREDRISRLPDTMLTYIISFLPTKNAVGTSVLAKRWKNLWASVPVLDFDDTLILS 48
           G    E  D IS LPD +L +I+SFLPTK AVGTS+L+KRW+ LWASVP+LDFDD L L+
Sbjct: 2   GSEYEESRDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLN 61

Query: 47  KSS--NKKRRINRFMNF 3
            S+    + RI  F NF
Sbjct: 62  PSTLVELEERIIMFQNF 78


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/77 (57%), Positives = 54/77 (70%), Gaps = 2/77 (2%)
 Frame = -2

Query: 227 GQNSGEREDRISRLPDTMLTYIISFLPTKNAVGTSVLAKRWKNLWASVPVLDFDDTLILS 48
           G    E  D IS LPD +L +I+SFLPTK AVGTS+L+KRW+ LWASVP+LDFDD L L+
Sbjct: 2   GSEYEESRDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLN 61

Query: 47  KSS--NKKRRINRFMNF 3
            S+    + RI  F NF
Sbjct: 62  PSTLVELEERIIMFQNF 78


>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 39/57 (68%), Positives = 47/57 (82%)
 Frame = -2

Query: 215 GEREDRISRLPDTMLTYIISFLPTKNAVGTSVLAKRWKNLWASVPVLDFDDTLILSK 45
           G+  DRIS LPD +L +IISFLPTK AVGTSVL+KRW+ LWAS+P LDFDD L+L +
Sbjct: 6   GKSRDRISNLPDAVLCHIISFLPTKFAVGTSVLSKRWRYLWASIPNLDFDDDLLLDR 62


>ref|XP_003596628.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355485676|gb|AES66879.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 123

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 38/81 (46%), Positives = 53/81 (65%)
 Frame = -2

Query: 248 KKRKLVEGQNSGEREDRISRLPDTMLTYIISFLPTKNAVGTSVLAKRWKNLWASVPVLDF 69
           +K KL + QNS + +D IS LPD ++ YI+ FLPTK AV TSVL+K+W  LW  +  LDF
Sbjct: 12  RKHKLSKRQNSIKGQDLISNLPDHIIGYILFFLPTKEAVRTSVLSKKWIYLWKFITKLDF 71

Query: 68  DDTLILSKSSNKKRRINRFMN 6
           DDT   S +  +K+    F++
Sbjct: 72  DDTKHFSLNKIRKKGFVDFVD 92


>ref|XP_003532284.1| PREDICTED: F-box/FBD/LRR-repeat protein At4g26340-like [Glycine
           max]
          Length = 380

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 31/51 (60%), Positives = 42/51 (82%)
 Frame = -2

Query: 206 EDRISRLPDTMLTYIISFLPTKNAVGTSVLAKRWKNLWASVPVLDFDDTLI 54
           EDRIS LPD +L +I+SFLPTK ++ TS+L+KRWK LW SVP L F+++L+
Sbjct: 2   EDRISNLPDAVLCHILSFLPTKQSIVTSILSKRWKALWRSVPALHFEESLM 52