BLASTX nr result

ID: Coptis23_contig00030482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030482
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534066.1| conserved hypothetical protein [Ricinus comm...   127   1e-27
ref|XP_002283630.1| PREDICTED: uncharacterized protein LOC100245...   122   4e-26
ref|XP_004139823.1| PREDICTED: uncharacterized protein LOC101212...   119   2e-25
emb|CBI22110.3| unnamed protein product [Vitis vinifera]              117   1e-24
gb|ACU23253.1| unknown [Glycine max]                                  117   1e-24

>ref|XP_002534066.1| conserved hypothetical protein [Ricinus communis]
           gi|223525893|gb|EEF28310.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 283

 Score =  127 bits (318), Expect = 1e-27
 Identities = 69/117 (58%), Positives = 90/117 (76%), Gaps = 5/117 (4%)
 Frame = +1

Query: 52  PPRTKTIFISANMK-NTEQLRTQLLQLHAEAEKTRDKASNTRLRFMRLSEAAEKLQRQAI 228
           P   + + +++N K NTEQLRTQL QLH E++ TR KA++ RLRFMRLSEAAEKL+RQA 
Sbjct: 14  PSALRPVCLASNTKINTEQLRTQLDQLHVESDTTRAKANSARLRFMRLSEAAEKLKRQAA 73

Query: 229 TDIRIGRETEAREQLFQKRKVIQALEKSKSRIKMLDELLAKLNEG----ELIVIANV 387
             I  G+E EARE LFQK+KV+QA+E+SKSRI++LD+L AKLNE     E ++I N+
Sbjct: 74  ISIHSGKENEARELLFQKKKVMQAMERSKSRIELLDQLSAKLNEAISIKESLLIGNI 130


>ref|XP_002283630.1| PREDICTED: uncharacterized protein LOC100245557 [Vitis vinifera]
          Length = 287

 Score =  122 bits (305), Expect = 4e-26
 Identities = 65/102 (63%), Positives = 77/102 (75%)
 Frame = +1

Query: 55  PRTKTIFISANMKNTEQLRTQLLQLHAEAEKTRDKASNTRLRFMRLSEAAEKLQRQAITD 234
           P T     SA+   T+QLR QL QLH EA   R KA+N RLR MRLSEAAE+L+RQA   
Sbjct: 17  PWTNVCLCSASNMGTDQLRAQLDQLHYEANNARAKANNARLRLMRLSEAAERLRRQAAIS 76

Query: 235 IRIGRETEAREQLFQKRKVIQALEKSKSRIKMLDELLAKLNE 360
           ++ G+E EARE LFQK+KV+QALEKSKSRI++LDEL AKLNE
Sbjct: 77  VQTGKENEARELLFQKKKVMQALEKSKSRIELLDELSAKLNE 118


>ref|XP_004139823.1| PREDICTED: uncharacterized protein LOC101212137 [Cucumis sativus]
           gi|449529567|ref|XP_004171771.1| PREDICTED:
           uncharacterized protein LOC101227535 [Cucumis sativus]
          Length = 285

 Score =  119 bits (299), Expect = 2e-25
 Identities = 64/104 (61%), Positives = 82/104 (78%)
 Frame = +1

Query: 49  IPPRTKTIFISANMKNTEQLRTQLLQLHAEAEKTRDKASNTRLRFMRLSEAAEKLQRQAI 228
           + P  K I  S+N+ +T+QLR +L  LH+EAE TR KA++ RLR +RLSEAAEKL++QA 
Sbjct: 15  VRPLWKPIRASSNI-STQQLRQELTHLHSEAETTRTKANSARLRLLRLSEAAEKLRQQAA 73

Query: 229 TDIRIGRETEAREQLFQKRKVIQALEKSKSRIKMLDELLAKLNE 360
             +R G+E EAR+ LFQK+KV+QALEKS SRIK+LDEL AKLNE
Sbjct: 74  ISVRTGKENEARDLLFQKKKVMQALEKSNSRIKLLDELSAKLNE 117


>emb|CBI22110.3| unnamed protein product [Vitis vinifera]
          Length = 259

 Score =  117 bits (292), Expect = 1e-24
 Identities = 61/88 (69%), Positives = 72/88 (81%)
 Frame = +1

Query: 97  TEQLRTQLLQLHAEAEKTRDKASNTRLRFMRLSEAAEKLQRQAITDIRIGRETEAREQLF 276
           T+QLR QL QLH EA   R KA+N RLR MRLSEAAE+L+RQA   ++ G+E EARE LF
Sbjct: 3   TDQLRAQLDQLHYEANNARAKANNARLRLMRLSEAAERLRRQAAISVQTGKENEARELLF 62

Query: 277 QKRKVIQALEKSKSRIKMLDELLAKLNE 360
           QK+KV+QALEKSKSRI++LDEL AKLNE
Sbjct: 63  QKKKVMQALEKSKSRIELLDELSAKLNE 90


>gb|ACU23253.1| unknown [Glycine max]
          Length = 293

 Score =  117 bits (292), Expect = 1e-24
 Identities = 65/123 (52%), Positives = 87/123 (70%), Gaps = 6/123 (4%)
 Frame = +1

Query: 10  MFSAIMNTAPTMFIPPRTKTIFISANMK------NTEQLRTQLLQLHAEAEKTRDKASNT 171
           + + +  TA  M   PR ++I   A+        NT+QLR+QL QLHAEA+ TR KA+N 
Sbjct: 2   ILNCVRVTAMPMMAVPRWRSICCCASSSSSVSTINTDQLRSQLDQLHAEADATRTKATNA 61

Query: 172 RLRFMRLSEAAEKLQRQAITDIRIGRETEAREQLFQKRKVIQALEKSKSRIKMLDELLAK 351
           RLR +RLSEAAEKL++QA   I+ G+E  ARE LFQ++KV+QAL+KSK RI++LDEL  K
Sbjct: 62  RLRLLRLSEAAEKLKKQAAISIQKGQENYAREMLFQRKKVLQALDKSKRRIELLDELSTK 121

Query: 352 LNE 360
           L+E
Sbjct: 122 LSE 124


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