BLASTX nr result

ID: Coptis23_contig00030474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030474
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002450204.1| hypothetical protein SORBIDRAFT_05g001940 [S...   171   7e-41
ref|XP_002440902.1| hypothetical protein SORBIDRAFT_09g016160 [S...   170   1e-40
ref|XP_002440314.1| hypothetical protein SORBIDRAFT_09g029620 [S...   164   5e-39
ref|XP_002446463.1| hypothetical protein SORBIDRAFT_06g016400 [S...   164   7e-39
ref|XP_002453364.1| hypothetical protein SORBIDRAFT_04g004660 [S...   164   9e-39

>ref|XP_002450204.1| hypothetical protein SORBIDRAFT_05g001940 [Sorghum bicolor]
           gi|241936047|gb|EES09192.1| hypothetical protein
           SORBIDRAFT_05g001940 [Sorghum bicolor]
          Length = 526

 Score =  171 bits (432), Expect = 7e-41
 Identities = 80/131 (61%), Positives = 102/131 (77%)
 Frame = -1

Query: 397 PGHEVVFYSFDSVEDDFRNLYQQELLNNISPGGLPAHELRLKIGAPIMLLRNINPGYGMC 218
           PG E V+YSFDSV+DD RN Y  + LN+I+P GLP HEL++K   P++LLRN++P  G+C
Sbjct: 338 PGEEKVYYSFDSVDDDSRNNYPIDFLNSITPNGLPPHELKIKTNCPVILLRNLDPNNGLC 397

Query: 217 NGTRLVCLGFDTNHIHAEIVTGHAAGRKEFIPRIPLKTSEDLNLPFQLIRKQFPVRLSFA 38
           NGTRL+   F  N I AEIV G  AG++ FIPRIP+  S+D++LPF+L RKQFP+RLSFA
Sbjct: 398 NGTRLMVRTFQDNAIDAEIVGGQHAGKRVFIPRIPMSPSDDISLPFKLKRKQFPIRLSFA 457

Query: 37  LTINKAQGQTI 5
           +TINK QGQTI
Sbjct: 458 MTINKTQGQTI 468


>ref|XP_002440902.1| hypothetical protein SORBIDRAFT_09g016160 [Sorghum bicolor]
            gi|241946187|gb|EES19332.1| hypothetical protein
            SORBIDRAFT_09g016160 [Sorghum bicolor]
          Length = 1379

 Score =  170 bits (431), Expect = 1e-40
 Identities = 77/131 (58%), Positives = 104/131 (79%)
 Frame = -1

Query: 397  PGHEVVFYSFDSVEDDFRNLYQQELLNNISPGGLPAHELRLKIGAPIMLLRNINPGYGMC 218
            PG E V++SFDSV+D+ RN Y  + +N+I+P GLP H L++K+  P++LLRN++P  G+C
Sbjct: 1192 PGEERVYHSFDSVDDESRNNYPIDFINSITPNGLPPHVLKVKVNCPVILLRNLDPNNGLC 1251

Query: 217  NGTRLVCLGFDTNHIHAEIVTGHAAGRKEFIPRIPLKTSEDLNLPFQLIRKQFPVRLSFA 38
            NGTRL+   F  N I AEIV GH AGR+ F+PRIP+  S+D++LPF++ RKQFP+RLSFA
Sbjct: 1252 NGTRLMVRAFQDNAIDAEIVAGHHAGRRVFLPRIPMSPSDDISLPFKMKRKQFPIRLSFA 1311

Query: 37   LTINKAQGQTI 5
            +TINKAQGQTI
Sbjct: 1312 MTINKAQGQTI 1322


>ref|XP_002440314.1| hypothetical protein SORBIDRAFT_09g029620 [Sorghum bicolor]
            gi|241945599|gb|EES18744.1| hypothetical protein
            SORBIDRAFT_09g029620 [Sorghum bicolor]
          Length = 1108

 Score =  164 bits (416), Expect = 5e-39
 Identities = 81/130 (62%), Positives = 99/130 (76%)
 Frame = -1

Query: 394  GHEVVFYSFDSVEDDFRNLYQQELLNNISPGGLPAHELRLKIGAPIMLLRNINPGYGMCN 215
            G E+V++SFDSVEDD  N Y  E LN+++P GLP H L+LK+  PI+LLRNI+P  G+CN
Sbjct: 905  GKEMVYHSFDSVEDDPHNYYPLEFLNSLTPNGLPPHMLKLKLNCPIILLRNIDPANGLCN 964

Query: 214  GTRLVCLGFDTNHIHAEIVTGHAAGRKEFIPRIPLKTSEDLNLPFQLIRKQFPVRLSFAL 35
            GTRLV  GF  N I AEIV G  +G + F+PRIPL  S+D   PF+L RKQFPVRLSFA+
Sbjct: 965  GTRLVVRGFQKNAIDAEIVLGQHSGMRVFLPRIPLCPSDDEMFPFRLKRKQFPVRLSFAM 1024

Query: 34   TINKAQGQTI 5
            TINK+QGQTI
Sbjct: 1025 TINKSQGQTI 1034


>ref|XP_002446463.1| hypothetical protein SORBIDRAFT_06g016400 [Sorghum bicolor]
            gi|241937646|gb|EES10791.1| hypothetical protein
            SORBIDRAFT_06g016400 [Sorghum bicolor]
          Length = 998

 Score =  164 bits (415), Expect = 7e-39
 Identities = 79/131 (60%), Positives = 100/131 (76%)
 Frame = -1

Query: 397  PGHEVVFYSFDSVEDDFRNLYQQELLNNISPGGLPAHELRLKIGAPIMLLRNINPGYGMC 218
            PG E V++SFDSV+DD RN Y  E LN+I+P GLP H L +KI  P++LLRN++P  G+C
Sbjct: 810  PGEEKVYHSFDSVDDDSRNNYPIEFLNSITPNGLPPHVLIVKINCPVILLRNLDPNNGLC 869

Query: 217  NGTRLVCLGFDTNHIHAEIVTGHAAGRKEFIPRIPLKTSEDLNLPFQLIRKQFPVRLSFA 38
            NGTRL+   F  N I AEIV G   G++ FI RIP+  S+D++LPF+L RKQFP+RLSFA
Sbjct: 870  NGTRLMVRAFQDNAIDAEIVGGQHQGKRVFITRIPMSPSDDISLPFKLKRKQFPIRLSFA 929

Query: 37   LTINKAQGQTI 5
            +TINKAQGQTI
Sbjct: 930  MTINKAQGQTI 940


>ref|XP_002453364.1| hypothetical protein SORBIDRAFT_04g004660 [Sorghum bicolor]
            gi|241933195|gb|EES06340.1| hypothetical protein
            SORBIDRAFT_04g004660 [Sorghum bicolor]
          Length = 1145

 Score =  164 bits (414), Expect = 9e-39
 Identities = 78/130 (60%), Positives = 98/130 (75%)
 Frame = -1

Query: 394  GHEVVFYSFDSVEDDFRNLYQQELLNNISPGGLPAHELRLKIGAPIMLLRNINPGYGMCN 215
            G+E+V++SFDS  DD  N Y  E LN ++P GLP H L+LKIG P++LLRNI+P  G+CN
Sbjct: 953  GNEMVYHSFDSAVDDPHNYYPSEFLNTLTPNGLPPHVLKLKIGCPVILLRNIDPAGGLCN 1012

Query: 214  GTRLVCLGFDTNHIHAEIVTGHAAGRKEFIPRIPLKTSEDLNLPFQLIRKQFPVRLSFAL 35
            GTRLV  GF  N + AEI+ G  AG++ F+PRIPL  S+D   PFQ  RKQFP+RLSFA+
Sbjct: 1013 GTRLVVRGFQRNIVDAEIMVGDHAGKRIFLPRIPLCPSDDEMFPFQFKRKQFPIRLSFAM 1072

Query: 34   TINKAQGQTI 5
            TINKAQGQT+
Sbjct: 1073 TINKAQGQTL 1082


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