BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030468
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containi...   102   2e-20
ref|XP_002315631.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19
ref|XP_002515001.1| pentatricopeptide repeat-containing protein,...    93   3e-17
ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containi...    90   2e-16
ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containi...    90   2e-16

>ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial [Vitis vinifera]
          Length = 496

 Score =  102 bits (255), Expect = 2e-20
 Identities = 45/76 (59%), Positives = 60/76 (78%)
 Frame = +1

Query: 4   ARLGYKHTPQAYAKTVDILGKAKKISRMLLVLDEMREGNRVTLEIIAKVMRRLCGAGKWE 183
           +RLGY+H P+AY   VDILGK K++ +M  +++EMR+GN V L  +AK MRRL GAG+WE
Sbjct: 104 SRLGYEHAPEAYDMMVDILGKLKQVDKMRALMEEMRQGNLVRLSTVAKAMRRLAGAGEWE 163

Query: 184 DAIKIFDDLGTFGLEK 231
           DA+++FDDLG F LEK
Sbjct: 164 DAVRVFDDLGNFELEK 179


>ref|XP_002315631.1| predicted protein [Populus trichocarpa] gi|222864671|gb|EEF01802.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 45/77 (58%), Positives = 57/77 (74%)
 Frame = +1

Query: 1   GARLGYKHTPQAYAKTVDILGKAKKISRMLLVLDEMREGNRVTLEIIAKVMRRLCGAGKW 180
           G R GYKH P+AY   VDILGK K++ +M  +L+EM   + VTL  + K MRR  GAGKW
Sbjct: 65  GLRPGYKHRPEAYDMMVDILGKMKQMDQMRELLEEMNRNHLVTLNTVGKAMRRFSGAGKW 124

Query: 181 EDAIKIFDDLGTFGLEK 231
           EDA+++FD+LGTFGLEK
Sbjct: 125 EDAVRMFDELGTFGLEK 141


>ref|XP_002515001.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546052|gb|EEF47555.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 466

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 40/76 (52%), Positives = 57/76 (75%)
 Frame = +1

Query: 4   ARLGYKHTPQAYAKTVDILGKAKKISRMLLVLDEMREGNRVTLEIIAKVMRRLCGAGKWE 183
           +R GYKH+P+AY   VDI+GK K++ +M  +L+EM +G  VTL+ + K MRR  GA +WE
Sbjct: 77  SRAGYKHSPEAYDTMVDIMGKMKQMDQMEFLLEEMEKGQHVTLKTVGKAMRRFAGARQWE 136

Query: 184 DAIKIFDDLGTFGLEK 231
           + +++FD LGTFGLEK
Sbjct: 137 NVLRVFDKLGTFGLEK 152


>ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial-like [Cucumis sativus]
          Length = 488

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 40/73 (54%), Positives = 55/73 (75%)
 Frame = +1

Query: 13  GYKHTPQAYAKTVDILGKAKKISRMLLVLDEMREGNRVTLEIIAKVMRRLCGAGKWEDAI 192
           G+KHTP  Y   +D LGK K++ +M  +L+EM+E   VTL+ +AK MRR  GAG+WE+A+
Sbjct: 102 GFKHTPDLYDILIDTLGKTKQLVKMRGMLEEMKEARLVTLDTVAKAMRRFAGAGQWENAV 161

Query: 193 KIFDDLGTFGLEK 231
           +IFDDL T+GLEK
Sbjct: 162 RIFDDLETYGLEK 174


>ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial-like [Cucumis sativus]
          Length = 519

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 40/73 (54%), Positives = 55/73 (75%)
 Frame = +1

Query: 13  GYKHTPQAYAKTVDILGKAKKISRMLLVLDEMREGNRVTLEIIAKVMRRLCGAGKWEDAI 192
           G+KHTP  Y   +D LGK K++ +M  +L+EM+E   VTL+ +AK MRR  GAG+WE+A+
Sbjct: 133 GFKHTPDLYDILIDTLGKTKQLVKMRGMLEEMKEARLVTLDTVAKAMRRFAGAGQWENAV 192

Query: 193 KIFDDLGTFGLEK 231
           +IFDDL T+GLEK
Sbjct: 193 RIFDDLETYGLEK 205