BLASTX nr result

ID: Coptis23_contig00030460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030460
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27453.3| unnamed protein product [Vitis vinifera]              150   1e-34
ref|XP_003631309.1| PREDICTED: uncharacterized protein LOC100854...   130   9e-29
ref|XP_002310662.1| predicted protein [Populus trichocarpa] gi|2...   128   4e-28
ref|XP_002520910.1| electron transporter, putative [Ricinus comm...   107   8e-22
ref|XP_002883203.1| hypothetical protein ARALYDRAFT_479495 [Arab...   103   1e-20

>emb|CBI27453.3| unnamed protein product [Vitis vinifera]
          Length = 1106

 Score =  150 bits (378), Expect = 1e-34
 Identities = 73/147 (49%), Positives = 99/147 (67%), Gaps = 1/147 (0%)
 Frame = -1

Query: 441 GIISGANFYGERNLSPASGQEENQKGSNNEKLTCGAESGLGEIPCVGGFTSANQSATS-E 265
           G+  G +F GE N++      ENQKG  NEKL CG E+G  +IP +G F+  N S    E
Sbjct: 194 GVPFGLDFKGETNITLEPRGNENQKGMQNEKLNCGIENGFNDIPWLGDFSRVNDSDPYLE 253

Query: 264 TEYTLPGAGMSCTFDEFQKFEAFFSEFMTLSREFLLPPERQSFGLVTERFLLTSLEARDH 85
           TE   PG  +SCT +EF++F+ F S+FMT++ EF LP ERQ FGLV+ R LL+SL+  D 
Sbjct: 254 TENITPGVKLSCTIEEFKQFDFFLSKFMTVAGEFFLPLERQRFGLVSNRSLLSSLDIGDS 313

Query: 84  DSWVMVIHVAGCPNCSKVLKDGNDFRS 4
            SW  +++ AGCP+CSK+LK+G+D RS
Sbjct: 314 GSWFAMVYFAGCPSCSKILKEGDDLRS 340


>ref|XP_003631309.1| PREDICTED: uncharacterized protein LOC100854034 [Vitis vinifera]
          Length = 588

 Score =  130 bits (328), Expect = 9e-29
 Identities = 62/119 (52%), Positives = 84/119 (70%), Gaps = 1/119 (0%)
 Frame = -1

Query: 357 NEKLTCGAESGLGEIPCVGGFTSANQSATS-ETEYTLPGAGMSCTFDEFQKFEAFFSEFM 181
           NEKL CG E+G  +IP +G F+  N S    ETE   PG  +SCT +EF++F+ F S+FM
Sbjct: 3   NEKLNCGIENGFNDIPWLGDFSRVNDSDPYLETENITPGVKLSCTIEEFKQFDFFLSKFM 62

Query: 180 TLSREFLLPPERQSFGLVTERFLLTSLEARDHDSWVMVIHVAGCPNCSKVLKDGNDFRS 4
           T++ EF LP ERQ FGLV+ R LL+SL+  D  SW  +++ AGCP+CSK+LK+G+D RS
Sbjct: 63  TVAGEFFLPLERQRFGLVSNRSLLSSLDIGDSGSWFAMVYFAGCPSCSKILKEGDDLRS 121


>ref|XP_002310662.1| predicted protein [Populus trichocarpa] gi|222853565|gb|EEE91112.1|
           predicted protein [Populus trichocarpa]
          Length = 1080

 Score =  128 bits (322), Expect = 4e-28
 Identities = 63/143 (44%), Positives = 91/143 (63%), Gaps = 5/143 (3%)
 Frame = -1

Query: 420 FYGERNLSPASGQEENQKGSNNEKLTCGAESGLGEIPCVGGFTSANQSAT-----SETEY 256
           F GE N+      +ENQK + N ++ CG E+GL  IP +G F S N SA      S+   
Sbjct: 201 FDGESNVISTPSGKENQKVAENGEMKCGMENGLRGIPWLGEFASVNDSAPLQETDSQDSV 260

Query: 255 TLPGAGMSCTFDEFQKFEAFFSEFMTLSREFLLPPERQSFGLVTERFLLTSLEARDHDSW 76
            L  + +SC+ +EFQKF++FFS FMT  REF LPPE+  FGLV+E+ +L+ L   D  SW
Sbjct: 261 DLKPSAVSCSLEEFQKFDSFFSSFMTDVREFFLPPEKHRFGLVSEKSMLSPLGVGDSGSW 320

Query: 75  VMVIHVAGCPNCSKVLKDGNDFR 7
            ++++  GCP+CS +LK+G+D +
Sbjct: 321 SVMLYYNGCPSCSSILKEGDDMK 343


>ref|XP_002520910.1| electron transporter, putative [Ricinus communis]
           gi|223539876|gb|EEF41455.1| electron transporter,
           putative [Ricinus communis]
          Length = 587

 Score =  107 bits (268), Expect = 8e-22
 Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 4/122 (3%)
 Frame = -1

Query: 354 EKLTCGAESGLGEIPCVGGFTSANQSA---TSETEYTLPGA-GMSCTFDEFQKFEAFFSE 187
           E   CG + G  E+P    F+S N SA    ++ E   P     SCT++EFQ+FE+FFS 
Sbjct: 13  ENSKCGIQDGFSEVPWFVEFSSVNASAFLQDTDAEDIKPDVRSSSCTYEEFQQFESFFSG 72

Query: 186 FMTLSREFLLPPERQSFGLVTERFLLTSLEARDHDSWVMVIHVAGCPNCSKVLKDGNDFR 7
           FM ++REF L  ER  FGLV+ER LL+SL   D  SW  ++   GCP+CS++LK+G+D +
Sbjct: 73  FMNVAREFFLLSERYRFGLVSERSLLSSLGIGDSGSWSTMLWFNGCPSCSRILKEGDDLK 132

Query: 6   SA 1
           SA
Sbjct: 133 SA 134


>ref|XP_002883203.1| hypothetical protein ARALYDRAFT_479495 [Arabidopsis lyrata subsp.
           lyrata] gi|297329043|gb|EFH59462.1| hypothetical protein
           ARALYDRAFT_479495 [Arabidopsis lyrata subsp. lyrata]
          Length = 1012

 Score =  103 bits (257), Expect = 1e-20
 Identities = 46/113 (40%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
 Frame = -1

Query: 342 CGAESGLGEIPCVGGFTSANQSATSETEYTLP-GAGMSCTFDEFQKFEAFFSEFMTLSRE 166
           CG +SG G++P +  F+ AN +A  +    +  G G +C  ++F++F +F S+ +  ++E
Sbjct: 192 CGLQSGFGKVPWLEDFSYANDTAALQEHGRVNLGFGQTCNHEDFKQFSSFLSKLIATTKE 251

Query: 165 FLLPPERQSFGLVTERFLLTSLEARDHDSWVMVIHVAGCPNCSKVLKDGNDFR 7
           F LPPERQ FGL+TE  L +S      DSW  V+ +AGCP+CSK+ K G+D +
Sbjct: 252 FSLPPERQKFGLITEESLASSFNIGKSDSWAAVLQLAGCPHCSKIFKAGDDIQ 304


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