BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030450
         (826 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-l...   426   e-117
emb|CBI38559.3| unnamed protein product [Vitis vinifera]              426   e-117
ref|XP_002332333.1| predicted protein [Populus trichocarpa] gi|2...   423   e-116
ref|XP_002511032.1| ATP-dependent DNA helicase pcrA, putative [R...   422   e-116
ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-l...   407   e-111

>ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-like [Vitis vinifera]
          Length = 1113

 Score =  426 bits (1095), Expect = e-117
 Identities = 208/275 (75%), Positives = 242/275 (88%)
 Frame = -1

Query: 826  CSVNLLTDFPGVRGQSQDLWKAMVIDEFQDTSATQYNFLRILASHNHITIVGDEDQSIFS 647
            CSV LL+DFP V  + Q+ WKA+VIDEFQDTSA QY  LRILASHN ITIVGDEDQSIFS
Sbjct: 419  CSVKLLSDFPEVFRECQESWKAVVIDEFQDTSAMQYCLLRILASHNRITIVGDEDQSIFS 478

Query: 646  FNGADVSGFDSFRKDFPNHREIRLTKNYRSTRCIVEAASSLINNNVNRCQMKQVLTDNSC 467
            FNGADVSGF+SFRKDFPNH+EIRL KNYRSTRCI+EAASSLI NN+ RCQ K+VLTDNS 
Sbjct: 479  FNGADVSGFNSFRKDFPNHKEIRLNKNYRSTRCILEAASSLIQNNMKRCQSKKVLTDNST 538

Query: 466  GCKITVKECHNEVAQCAFVVDKILESMSDDSDVKRSFGNIAILYRRQVSGKVFQTAFRDR 287
            G ++T+KECH+E AQCAFVVDKILE  SDDS  K SFG++AILYRRQVSGKVFQTAFRDR
Sbjct: 539  GSRVTIKECHSEEAQCAFVVDKILEITSDDSVAKYSFGSVAILYRRQVSGKVFQTAFRDR 598

Query: 286  KIPFNVHGVAFYRKKVMKAIMAMLRTTVPRCDNSAFRQTFKTLLSFEKEEKRKVIDYIDK 107
            KIPFN+HGVAFYRKKV++AI+AMLRTT+  CD+ ++RQ FK LL  +KE+K++VI++IDK
Sbjct: 599  KIPFNIHGVAFYRKKVVRAIVAMLRTTLSGCDDGSYRQVFKALLPCDKEDKKRVIEHIDK 658

Query: 106  ISTIRKCSFISAARDIFAAKISGTFKRNQLSHGRK 2
            IS  RKCSF+SAA DIF+AK+SGTFKR+QL+ GRK
Sbjct: 659  ISITRKCSFVSAASDIFSAKVSGTFKRSQLTQGRK 693


>emb|CBI38559.3| unnamed protein product [Vitis vinifera]
          Length = 951

 Score =  426 bits (1095), Expect = e-117
 Identities = 208/275 (75%), Positives = 242/275 (88%)
 Frame = -1

Query: 826  CSVNLLTDFPGVRGQSQDLWKAMVIDEFQDTSATQYNFLRILASHNHITIVGDEDQSIFS 647
            CSV LL+DFP V  + Q+ WKA+VIDEFQDTSA QY  LRILASHN ITIVGDEDQSIFS
Sbjct: 217  CSVKLLSDFPEVFRECQESWKAVVIDEFQDTSAMQYCLLRILASHNRITIVGDEDQSIFS 276

Query: 646  FNGADVSGFDSFRKDFPNHREIRLTKNYRSTRCIVEAASSLINNNVNRCQMKQVLTDNSC 467
            FNGADVSGF+SFRKDFPNH+EIRL KNYRSTRCI+EAASSLI NN+ RCQ K+VLTDNS 
Sbjct: 277  FNGADVSGFNSFRKDFPNHKEIRLNKNYRSTRCILEAASSLIQNNMKRCQSKKVLTDNST 336

Query: 466  GCKITVKECHNEVAQCAFVVDKILESMSDDSDVKRSFGNIAILYRRQVSGKVFQTAFRDR 287
            G ++T+KECH+E AQCAFVVDKILE  SDDS  K SFG++AILYRRQVSGKVFQTAFRDR
Sbjct: 337  GSRVTIKECHSEEAQCAFVVDKILEITSDDSVAKYSFGSVAILYRRQVSGKVFQTAFRDR 396

Query: 286  KIPFNVHGVAFYRKKVMKAIMAMLRTTVPRCDNSAFRQTFKTLLSFEKEEKRKVIDYIDK 107
            KIPFN+HGVAFYRKKV++AI+AMLRTT+  CD+ ++RQ FK LL  +KE+K++VI++IDK
Sbjct: 397  KIPFNIHGVAFYRKKVVRAIVAMLRTTLSGCDDGSYRQVFKALLPCDKEDKKRVIEHIDK 456

Query: 106  ISTIRKCSFISAARDIFAAKISGTFKRNQLSHGRK 2
            IS  RKCSF+SAA DIF+AK+SGTFKR+QL+ GRK
Sbjct: 457  ISITRKCSFVSAASDIFSAKVSGTFKRSQLTQGRK 491


>ref|XP_002332333.1| predicted protein [Populus trichocarpa] gi|222832580|gb|EEE71057.1|
            predicted protein [Populus trichocarpa]
          Length = 1056

 Score =  423 bits (1087), Expect = e-116
 Identities = 206/275 (74%), Positives = 240/275 (87%)
 Frame = -1

Query: 826  CSVNLLTDFPGVRGQSQDLWKAMVIDEFQDTSATQYNFLRILASHNHITIVGDEDQSIFS 647
            CSV LLTDFP V    +D WKA+VIDEFQDTSA QY+ LR+L+SHNHITIVGD+DQSIFS
Sbjct: 363  CSVKLLTDFPEVFEDCKDSWKAIVIDEFQDTSAMQYSLLRLLSSHNHITIVGDDDQSIFS 422

Query: 646  FNGADVSGFDSFRKDFPNHREIRLTKNYRSTRCIVEAASSLINNNVNRCQMKQVLTDNSC 467
            FNGA++SGFDSFR DF N++EIRL KNYRSTR IVEAASSLI NN+ RCQ K VLTDNSC
Sbjct: 423  FNGAEISGFDSFRHDFANYKEIRLNKNYRSTRYIVEAASSLIQNNMKRCQFKDVLTDNSC 482

Query: 466  GCKITVKECHNEVAQCAFVVDKILESMSDDSDVKRSFGNIAILYRRQVSGKVFQTAFRDR 287
            G KI +KEC NE A+CAFVVDKILE+ SD S  K S+G+IAILYRRQVSGK+FQ AFR+R
Sbjct: 483  GSKIAIKECQNERAECAFVVDKILEAASDGSHSKPSYGSIAILYRRQVSGKIFQLAFRER 542

Query: 286  KIPFNVHGVAFYRKKVMKAIMAMLRTTVPRCDNSAFRQTFKTLLSFEKEEKRKVIDYIDK 107
            KIPFNVHGVAFYRKKV+KAI+AMLRTT+P CD+ ++ Q FK LL FEKEEKR+VI+++DK
Sbjct: 543  KIPFNVHGVAFYRKKVVKAIIAMLRTTLPGCDDGSYHQVFKALLPFEKEEKRRVIEHVDK 602

Query: 106  ISTIRKCSFISAARDIFAAKISGTFKRNQLSHGRK 2
            IST+RKCSFI+AA D+F+AKISGTFKR+QL+ GRK
Sbjct: 603  ISTVRKCSFIAAACDVFSAKISGTFKRSQLTQGRK 637


>ref|XP_002511032.1| ATP-dependent DNA helicase pcrA, putative [Ricinus communis]
            gi|223550147|gb|EEF51634.1| ATP-dependent DNA helicase
            pcrA, putative [Ricinus communis]
          Length = 1089

 Score =  422 bits (1084), Expect = e-116
 Identities = 203/275 (73%), Positives = 239/275 (86%)
 Frame = -1

Query: 826  CSVNLLTDFPGVRGQSQDLWKAMVIDEFQDTSATQYNFLRILASHNHITIVGDEDQSIFS 647
            CSV LLTD+P V  + QD WKA+V+DEFQDTS  QY  LR+LASHNHITIVGD+DQSIFS
Sbjct: 396  CSVKLLTDYPDVFKECQDSWKAIVVDEFQDTSGMQYRLLRLLASHNHITIVGDDDQSIFS 455

Query: 646  FNGADVSGFDSFRKDFPNHREIRLTKNYRSTRCIVEAASSLINNNVNRCQMKQVLTDNSC 467
            FNGAD+SGFDSFR DFPN+REIRL KNYRSTR IVEAASSLI NN+ RC+ K V+TDNS 
Sbjct: 456  FNGADISGFDSFRLDFPNYREIRLNKNYRSTRHIVEAASSLIQNNMKRCRFKDVVTDNSS 515

Query: 466  GCKITVKECHNEVAQCAFVVDKILESMSDDSDVKRSFGNIAILYRRQVSGKVFQTAFRDR 287
            G KIT+KEC  E AQC+FV+DKILE  SD S  K+++GNIAILYRRQVSGK+FQ AFRDR
Sbjct: 516  GSKITIKECQTEHAQCSFVLDKILEMASDGSPAKQNYGNIAILYRRQVSGKLFQVAFRDR 575

Query: 286  KIPFNVHGVAFYRKKVMKAIMAMLRTTVPRCDNSAFRQTFKTLLSFEKEEKRKVIDYIDK 107
            K+PFNVHGVAFYRKKV+KAI+AMLRT +P+CD+  +RQ FK LL FEK+EK++V+D+++K
Sbjct: 576  KMPFNVHGVAFYRKKVVKAIIAMLRTALPKCDDGPYRQAFKALLPFEKDEKKRVVDHVEK 635

Query: 106  ISTIRKCSFISAARDIFAAKISGTFKRNQLSHGRK 2
            I TIRKCSFISAA+DIF+AKISGTFKR+QL+ GRK
Sbjct: 636  ILTIRKCSFISAAKDIFSAKISGTFKRSQLNQGRK 670


>ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-like [Glycine max]
          Length = 1123

 Score =  407 bits (1046), Expect = e-111
 Identities = 196/275 (71%), Positives = 235/275 (85%)
 Frame = -1

Query: 826  CSVNLLTDFPGVRGQSQDLWKAMVIDEFQDTSATQYNFLRILASHNHITIVGDEDQSIFS 647
            CSV LL+DFP V  + QD WKA+VIDEFQDTSA QY FL++LASH+ ITIVGD+DQSI+S
Sbjct: 428  CSVKLLSDFPEVFKECQDSWKAIVIDEFQDTSAMQYKFLKMLASHHKITIVGDDDQSIYS 487

Query: 646  FNGADVSGFDSFRKDFPNHREIRLTKNYRSTRCIVEAASSLINNNVNRCQMKQVLTDNSC 467
            FNGAD+SGF SFR DFPN++EIRL KNYRSTRCIVEAASSLI NN  RCQ+K VLTDNS 
Sbjct: 488  FNGADISGFISFRNDFPNYKEIRLNKNYRSTRCIVEAASSLIQNNSKRCQLKNVLTDNSS 547

Query: 466  GCKITVKECHNEVAQCAFVVDKILESMSDDSDVKRSFGNIAILYRRQVSGKVFQTAFRDR 287
            G KI +KECHNE AQCAFVVDKI+E  S+ S     +GNIAILYRRQ+SGK FQ AFRDR
Sbjct: 548  GSKIVMKECHNEDAQCAFVVDKIIEISSNYSAANCCYGNIAILYRRQISGKAFQMAFRDR 607

Query: 286  KIPFNVHGVAFYRKKVMKAIMAMLRTTVPRCDNSAFRQTFKTLLSFEKEEKRKVIDYIDK 107
            KIPFN+HGVAFYRKKV++ IMAMLRT +P CD+ ++ + FK L+  EK++K+++ID+I+K
Sbjct: 608  KIPFNIHGVAFYRKKVVRTIMAMLRTALPGCDDGSYSRVFKALMPLEKDKKKRIIDHINK 667

Query: 106  ISTIRKCSFISAARDIFAAKISGTFKRNQLSHGRK 2
            ISTIR+CSF+SAA DIF+AKISGTFKR++L+HGRK
Sbjct: 668  ISTIRRCSFLSAASDIFSAKISGTFKRSELTHGRK 702