BLASTX nr result

ID: Coptis23_contig00030435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030435
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310263.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002310263.1| predicted protein [Populus trichocarpa] gi|222853166|gb|EEE90713.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
 Frame = +1

Query: 43  APPNATDEDAALLSMARA-LQNDMN-MRVKSVPISAYKEMDEMDLNVACWNAYLTDCAAR 216
           A P       AL++M +A L  D++ +  +  P S YK+MDE DL   C+  Y  +C  R
Sbjct: 122 ARPGQEVGTVALIAMKQAELARDISRLDTEFRPASEYKQMDEQDLTRLCFEKYEEECR-R 180

Query: 217 NVTPKAKDDMSLLNFNVLRDMFGRTVRDSHLLTWLKNDANRTALYEYVQKHIRNLDESGK 396
           +    A    SLL   ++R  +   VR+SH+  + + D  +  L +Y  + I    +  +
Sbjct: 181 DEKEAAPLSESLLE--MVRTRYANEVRESHMYEFCRVDGRKELLLDYAHQKIAFAVQVAE 238

Query: 397 LRQAESFRRSLGIAG 441
            R   SFRR L  AG
Sbjct: 239 PRVGNSFRRYLAAAG 253


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