BLASTX nr result
ID: Coptis23_contig00030434
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00030434 (473 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera] 62 3e-12 emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera] 50 2e-08 emb|CAN70473.1| hypothetical protein VITISV_037490 [Vitis vinifera] 50 6e-08 ref|XP_002330141.1| predicted protein [Populus trichocarpa] gi|2... 62 6e-08 emb|CAN82610.1| hypothetical protein VITISV_021745 [Vitis vinifera] 52 7e-08 >emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera] Length = 1361 Score = 62.4 bits (150), Expect(2) = 3e-12 Identities = 27/61 (44%), Positives = 39/61 (63%) Frame = +3 Query: 45 LSNVFSGMQMSQSGEPSWYFDTGAINHMTGDTRSFAQMSDYGGSDQVMLGNGESLAIAHT 224 L+ FS + + W+ D+GA +HMT DT Q Y G+++VM+GNG+SLAI+HT Sbjct: 416 LAEAFSAYSIQDFNDSEWFPDSGATSHMTSDTEGVNQPDVYSGNERVMVGNGQSLAISHT 475 Query: 225 G 227 G Sbjct: 476 G 476 Score = 33.9 bits (76), Expect(2) = 3e-12 Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 3/40 (7%) Frame = +1 Query: 223 LGRCEGGLYPFRSMRPHRFAFSASSTSP---FWHRRLGHP 333 +GRCE GLY R H + SS WH RLGHP Sbjct: 501 VGRCENGLYVL-DRRHHALVSTTSSPRASVRLWHTRLGHP 539 >emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera] Length = 920 Score = 49.7 bits (117), Expect(3) = 2e-08 Identities = 24/68 (35%), Positives = 41/68 (60%) Frame = +3 Query: 24 NRNNVDQLSNVFSGMQMSQSGEPSWYFDTGAINHMTGDTRSFAQMSDYGGSDQVMLGNGE 203 N+NN+ + FS + S + SWY D+GA +H+T + + S Y G+D+V +GN + Sbjct: 175 NQNNILAMVASFS----NSSADESWYLDSGASHHLTQNLGNLTSTSPYTGTDRVTIGNXK 230 Query: 204 SLAIAHTG 227 L+I++ G Sbjct: 231 HLSISNIG 238 Score = 26.6 bits (57), Expect(3) = 2e-08 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +3 Query: 408 CKDCALGKSTRLPFSLNETRS 470 C DC L KS RLP L+ R+ Sbjct: 337 CSDCQLAKSHRLPTQLSNFRA 357 Score = 25.8 bits (55), Expect(3) = 2e-08 Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 14/49 (28%) Frame = +1 Query: 226 GRCEGGLYPF---RSMRPH-----------RFAFSASSTSPFWHRRLGH 330 G+ E GLY F + +P+ F+ + + + WH RLGH Sbjct: 264 GKLENGLYKFPVFSNKKPYSSVNNASAFHSHFSSTIENKAELWHNRLGH 312 >emb|CAN70473.1| hypothetical protein VITISV_037490 [Vitis vinifera] Length = 786 Score = 49.7 bits (117), Expect(2) = 6e-08 Identities = 20/46 (43%), Positives = 29/46 (63%) Frame = +3 Query: 90 PSWYFDTGAINHMTGDTRSFAQMSDYGGSDQVMLGNGESLAIAHTG 227 P W D+G +H+T D + + + Y GSD +M+G+G SL I HTG Sbjct: 86 PQWLLDSGVSHHVTTDLSNLSLHTPYTGSDDIMIGDGSSLLITHTG 131 Score = 32.0 bits (71), Expect(2) = 6e-08 Identities = 22/48 (45%), Positives = 25/48 (52%), Gaps = 4/48 (8%) Frame = +1 Query: 202 NLLLLHTLGRCEGGLYPFRSMRPH---RFAFSASSTSPF-WHRRLGHP 333 +LL+ HT G GG PF AFS+ TS F WH RLGHP Sbjct: 124 SLLITHT-GTSHGG-NPFEGSHERWAPLVAFSSVKTSSFEWHHRLGHP 169 >ref|XP_002330141.1| predicted protein [Populus trichocarpa] gi|222871275|gb|EEF08406.1| predicted protein [Populus trichocarpa] Length = 443 Score = 61.6 bits (148), Expect = 6e-08 Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 7/134 (5%) Frame = +3 Query: 81 SGEPSWYFDTGAINHMTGDTRSFAQMSDYGGSDQVMLGNGESLAIAHTGPM*RWPLXXXX 260 + +P+WY DTGA +HMT + +Q YGG V +GNG+S++++HTGP Sbjct: 301 AADPNWYSDTGATHHMTAMPINNSQ--PYGGPHNVYIGNGDSMSVSHTGPC----KDGLY 354 Query: 261 XXXXXXXXXXXXXXTLLASQTWTSAPKVIQILGSNKC-----LGPSFN--FTHPHFCKDC 419 + S W + LG + L P+ N + P F +DC Sbjct: 355 PFNLSSVFTSPQALASVHSSIWHNR------LGHSSSNVFARLSPTINSKLSFPSFYRDC 408 Query: 420 ALGKSTRLPFSLNE 461 AL KS +LPF+ N+ Sbjct: 409 ALNKSHQLPFNSNK 422 >emb|CAN82610.1| hypothetical protein VITISV_021745 [Vitis vinifera] Length = 751 Score = 52.0 bits (123), Expect(2) = 7e-08 Identities = 21/47 (44%), Positives = 33/47 (70%) Frame = +3 Query: 87 EPSWYFDTGAINHMTGDTRSFAQMSDYGGSDQVMLGNGESLAIAHTG 227 + SW+FDTGA +H++ ++ + + Y G+DQV +G+G SL I HTG Sbjct: 183 QDSWFFDTGATHHLSHSAQTLSCVQPYLGTDQVTIGDGNSLPILHTG 229 Score = 29.3 bits (64), Expect(2) = 7e-08 Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 2/41 (4%) Frame = +1 Query: 217 HTLGRCEGGLYPFRSMRPHRFAFSASSTSP--FWHRRLGHP 333 H L G F S P R + SS S WH RLGHP Sbjct: 234 HELAETPTGHESFSSSSPPRAFVTTSSFSDGAIWHSRLGHP 274