BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030426
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234256.1| polygalacturonase [Solanum lycopersicum] gi|...   194   6e-48
ref|XP_003546932.1| PREDICTED: probable polygalacturonase At1g80...   186   2e-45
ref|XP_002517603.1| Polygalacturonase precursor, putative [Ricin...   185   5e-45
gb|ABM67700.1| polygalacturonase [Citrus sinensis]                    182   3e-44
ref|XP_002281827.2| PREDICTED: probable polygalacturonase At1g80...   182   4e-44

>ref|NP_001234256.1| polygalacturonase [Solanum lycopersicum]
           gi|7381227|gb|AAF61444.1|AF138858_1 polygalacturonase
           [Solanum lycopersicum]
          Length = 452

 Score =  194 bits (494), Expect = 6e-48
 Identities = 100/183 (54%), Positives = 126/183 (68%), Gaps = 1/183 (0%)
 Frame = -2

Query: 547 FSAFSVCVNKMRKLSAFSHLIFLYFIANVSIGDGFDPVIKL-PQFQSLXXXXXXXXXXXV 371
           FS++S  V     LS +S L FL   ANVS   GF+ +++L P   SL            
Sbjct: 14  FSSYSKSVALF--LSLYS-LYFLLISANVS---GFESLLQLLPASASLRTKSESLFRV-- 65

Query: 370 HHFGAKGDGIYNDTQAFKDAWEIACSSPLRFTIEVPSGSSFLVGPIEFVGPCRSKVTLRV 191
           + FGA GDGI +DT++FKD W++ACSSP    I +P+G SFLV  I F GPCRSKV++R+
Sbjct: 66  NDFGATGDGITDDTKSFKDVWDMACSSPSHAKIVIPAGYSFLVRQINFAGPCRSKVSIRI 125

Query: 190 TGNIIAPKDPGAWDGLNPRKWLYFTAVKHLTIDGGGVIIGMGEEWWSRSCKVNISNPCRH 11
            G I+APKDP  WD LNPRKW+YF  VKHLT++GGG+I GMG+EWW+RSCKVN +NPC H
Sbjct: 126 AGTILAPKDPDVWDDLNPRKWIYFFKVKHLTVEGGGIIDGMGQEWWARSCKVNRTNPCHH 185

Query: 10  APT 2
           APT
Sbjct: 186 APT 188


>ref|XP_003546932.1| PREDICTED: probable polygalacturonase At1g80170-like [Glycine max]
          Length = 443

 Score =  186 bits (472), Expect = 2e-45
 Identities = 85/163 (52%), Positives = 113/163 (69%)
 Frame = -2

Query: 490 LIFLYFIANVSIGDGFDPVIKLPQFQSLXXXXXXXXXXXVHHFGAKGDGIYNDTQAFKDA 311
           +IF++    V+  +G DPVI+LP+               V  +GAKGDG++NDT+AF +A
Sbjct: 14  IIFIHINILVTHAEGVDPVIQLPRSGLKRTRTRSKWVLSVGDYGAKGDGLHNDTEAFLEA 73

Query: 310 WEIACSSPLRFTIEVPSGSSFLVGPIEFVGPCRSKVTLRVTGNIIAPKDPGAWDGLNPRK 131
           W+IACS     ++  P G +FLV P++  GPCRSK+TLR++G I+AP+DP  W GLN RK
Sbjct: 74  WKIACSLSGFISVVFPYGKTFLVHPVDIGGPCRSKITLRISGTIVAPQDPVVWHGLNQRK 133

Query: 130 WLYFTAVKHLTIDGGGVIIGMGEEWWSRSCKVNISNPCRHAPT 2
           WLYF  V HLT+DGGG I GMG+EWW+RSCK+N +NPC  APT
Sbjct: 134 WLYFHGVNHLTVDGGGRINGMGQEWWARSCKINSTNPCHPAPT 176


>ref|XP_002517603.1| Polygalacturonase precursor, putative [Ricinus communis]
           gi|223543235|gb|EEF44767.1| Polygalacturonase precursor,
           putative [Ricinus communis]
          Length = 424

 Score =  185 bits (469), Expect = 5e-45
 Identities = 87/159 (54%), Positives = 108/159 (67%), Gaps = 1/159 (0%)
 Frame = -2

Query: 475 FIANVSIGDGFDPVIKLPQFQ-SLXXXXXXXXXXXVHHFGAKGDGIYNDTQAFKDAWEIA 299
           F   V +   FD +++LPQ + S            V  FGA GDG  NDTQAFK+AWE+A
Sbjct: 2   FTGFVCVQGSFDSLLQLPQSRLSARTRLRSKRVFFVSDFGAIGDGAANDTQAFKEAWEMA 61

Query: 298 CSSPLRFTIEVPSGSSFLVGPIEFVGPCRSKVTLRVTGNIIAPKDPGAWDGLNPRKWLYF 119
           CS P R  I +P+G + LV P++  GPC+SK+TL ++G I+APKDP  W G NPRKWLYF
Sbjct: 62  CSFPSRTRIVIPAGYTLLVHPVDLGGPCKSKLTLIISGTIVAPKDPAFWKGSNPRKWLYF 121

Query: 118 TAVKHLTIDGGGVIIGMGEEWWSRSCKVNISNPCRHAPT 2
             V HLTIDGGG I GMG  WW++SCK+N +NPCRHAPT
Sbjct: 122 HGVNHLTIDGGGTINGMGHRWWAQSCKINPNNPCRHAPT 160


>gb|ABM67700.1| polygalacturonase [Citrus sinensis]
          Length = 445

 Score =  182 bits (462), Expect = 3e-44
 Identities = 81/150 (54%), Positives = 105/150 (70%)
 Frame = -2

Query: 451 DGFDPVIKLPQFQSLXXXXXXXXXXXVHHFGAKGDGIYNDTQAFKDAWEIACSSPLRFTI 272
           +GFD +++LP   S            V  FGAKGDG  +DT+AF +AW+ ACS P R  I
Sbjct: 31  EGFDSLLELPHSGSNGTRSKSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKI 90

Query: 271 EVPSGSSFLVGPIEFVGPCRSKVTLRVTGNIIAPKDPGAWDGLNPRKWLYFTAVKHLTID 92
              +G +FL+ PI+  GPC+S++TL+++G I+APKDP  W GLN R+WLYF  V HLT+ 
Sbjct: 91  VFSAGYTFLIHPIDISGPCKSRLTLKISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQ 150

Query: 91  GGGVIIGMGEEWWSRSCKVNISNPCRHAPT 2
           GGG I GMG+EWWSRSCK+N +NPCRHAPT
Sbjct: 151 GGGTINGMGQEWWSRSCKINTTNPCRHAPT 180


>ref|XP_002281827.2| PREDICTED: probable polygalacturonase At1g80170-like [Vitis
           vinifera]
          Length = 452

 Score =  182 bits (461), Expect = 4e-44
 Identities = 80/162 (49%), Positives = 111/162 (68%)
 Frame = -2

Query: 487 IFLYFIANVSIGDGFDPVIKLPQFQSLXXXXXXXXXXXVHHFGAKGDGIYNDTQAFKDAW 308
           +F++ +  +   +GF+P+I+LP   +             + FGAKGDG+ +DT AF++AW
Sbjct: 27  VFIFLVLFLINVEGFEPLIQLPHSPAARPRLETKILYV-NQFGAKGDGVQDDTDAFRNAW 85

Query: 307 EIACSSPLRFTIEVPSGSSFLVGPIEFVGPCRSKVTLRVTGNIIAPKDPGAWDGLNPRKW 128
           +IAC+S  + +I +P    FLV PI F GPCR+KVT+ ++G IIAPKDP  W GLNP+KW
Sbjct: 86  KIACASITKASIVIPHDKKFLVRPISFGGPCRAKVTVTISGTIIAPKDPDVWHGLNPQKW 145

Query: 127 LYFTAVKHLTIDGGGVIIGMGEEWWSRSCKVNISNPCRHAPT 2
           LYF  V HLT+ G G+I G G +WWS+SCK+N +NPC HAPT
Sbjct: 146 LYFHGVNHLTVRGSGIINGRGHKWWSQSCKINATNPCEHAPT 187