BLASTX nr result

ID: Coptis23_contig00030416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030416
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32958.3| unnamed protein product [Vitis vinifera]              154   6e-36
ref|XP_002274497.1| PREDICTED: putative copper-transporting ATPa...   154   6e-36
ref|XP_002304082.1| heavy metal ATPase [Populus trichocarpa] gi|...   154   1e-35
ref|XP_002299685.1| heavy metal ATPase [Populus trichocarpa] gi|...   145   3e-33
ref|XP_002531490.1| copper-transporting atpase paa1, putative [R...   142   2e-32

>emb|CBI32958.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score =  154 bits (390), Expect = 6e-36
 Identities = 75/104 (72%), Positives = 91/104 (87%)
 Frame = +3

Query: 3   IDRKEVSVGTLDWVQRHGVAWDSSLEVEEIKNQSVVYVGVDGRLAGLIYFEDQIREDAGS 182
           ++ K+VSVGT DWVQRHGV  +   EV+E+KNQSVVYVGVDG LAGLIYFEDQIR+DA  
Sbjct: 169 VENKKVSVGTFDWVQRHGVQENPFQEVDELKNQSVVYVGVDGTLAGLIYFEDQIRDDARH 228

Query: 183 VIECLSKQGISTYMLSGDKQHAAEYVASVVGIPREKVLSGIKPD 314
           V+E LS+QGIS YMLSGDK++AAE+VAS VGIP++KVLSG+KP+
Sbjct: 229 VVESLSRQGISVYMLSGDKRNAAEHVASSVGIPKDKVLSGVKPN 272


>ref|XP_002274497.1| PREDICTED: putative copper-transporting ATPase PAA1-like [Vitis
           vinifera]
          Length = 928

 Score =  154 bits (390), Expect = 6e-36
 Identities = 75/104 (72%), Positives = 91/104 (87%)
 Frame = +3

Query: 3   IDRKEVSVGTLDWVQRHGVAWDSSLEVEEIKNQSVVYVGVDGRLAGLIYFEDQIREDAGS 182
           ++ K+VSVGT DWVQRHGV  +   EV+E+KNQSVVYVGVDG LAGLIYFEDQIR+DA  
Sbjct: 654 VENKKVSVGTFDWVQRHGVQENPFQEVDELKNQSVVYVGVDGTLAGLIYFEDQIRDDARH 713

Query: 183 VIECLSKQGISTYMLSGDKQHAAEYVASVVGIPREKVLSGIKPD 314
           V+E LS+QGIS YMLSGDK++AAE+VAS VGIP++KVLSG+KP+
Sbjct: 714 VVESLSRQGISVYMLSGDKRNAAEHVASSVGIPKDKVLSGVKPN 757


>ref|XP_002304082.1| heavy metal ATPase [Populus trichocarpa]
           gi|222841514|gb|EEE79061.1| heavy metal ATPase [Populus
           trichocarpa]
          Length = 865

 Score =  154 bits (388), Expect = 1e-35
 Identities = 77/104 (74%), Positives = 88/104 (84%)
 Frame = +3

Query: 3   IDRKEVSVGTLDWVQRHGVAWDSSLEVEEIKNQSVVYVGVDGRLAGLIYFEDQIREDAGS 182
           I+ K VSVGTLDW+QRHGV  +   EVE+IKNQSVVYVGVD  LAGLIYFEDQIREDA  
Sbjct: 622 IENKVVSVGTLDWIQRHGVCENPFQEVEDIKNQSVVYVGVDNTLAGLIYFEDQIREDARH 681

Query: 183 VIECLSKQGISTYMLSGDKQHAAEYVASVVGIPREKVLSGIKPD 314
           V+E LS QGI+ YMLSGD++  AEYVAS+VGIP+EKVLSG+KPD
Sbjct: 682 VVESLSCQGINVYMLSGDRKKNAEYVASLVGIPKEKVLSGVKPD 725


>ref|XP_002299685.1| heavy metal ATPase [Populus trichocarpa]
           gi|222846943|gb|EEE84490.1| heavy metal ATPase [Populus
           trichocarpa]
          Length = 879

 Score =  145 bits (367), Expect = 3e-33
 Identities = 70/104 (67%), Positives = 84/104 (80%)
 Frame = +3

Query: 3   IDRKEVSVGTLDWVQRHGVAWDSSLEVEEIKNQSVVYVGVDGRLAGLIYFEDQIREDAGS 182
           I+ K VS+GTLDW+QR+   W   ++   +KNQSVVYVGVD  LAGLIYFEDQIREDA  
Sbjct: 606 IENKVVSIGTLDWIQRYFTCWLLCIKYHNLKNQSVVYVGVDNTLAGLIYFEDQIREDARQ 665

Query: 183 VIECLSKQGISTYMLSGDKQHAAEYVASVVGIPREKVLSGIKPD 314
           V+E LS QGI+ YMLSGDK+  AE+VAS+VGIP+EKVLSG+KPD
Sbjct: 666 VVESLSSQGINVYMLSGDKKSTAEHVASLVGIPKEKVLSGVKPD 709


>ref|XP_002531490.1| copper-transporting atpase paa1, putative [Ricinus communis]
           gi|223528899|gb|EEF30897.1| copper-transporting atpase
           paa1, putative [Ricinus communis]
          Length = 947

 Score =  142 bits (359), Expect = 2e-32
 Identities = 70/104 (67%), Positives = 85/104 (81%)
 Frame = +3

Query: 3   IDRKEVSVGTLDWVQRHGVAWDSSLEVEEIKNQSVVYVGVDGRLAGLIYFEDQIREDAGS 182
           +D K+VSVGTLDWVQR+GV      EVE++KNQS+VYVGV+  LAG+IY EDQIREDA  
Sbjct: 669 VDNKQVSVGTLDWVQRNGVDGILFQEVEDLKNQSIVYVGVENTLAGIIYLEDQIREDARQ 728

Query: 183 VIECLSKQGISTYMLSGDKQHAAEYVASVVGIPREKVLSGIKPD 314
           V+E L +QGI  YMLSGDK+  AE+VASVVGI +EKVL+G+KPD
Sbjct: 729 VVESLCRQGIDVYMLSGDKRTTAEHVASVVGIQKEKVLAGVKPD 772


Top