BLASTX nr result

ID: Coptis23_contig00030408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030408
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39720.3| unnamed protein product [Vitis vinifera]              174   9e-42
ref|XP_002264649.1| PREDICTED: meiotic recombination protein SPO...   174   9e-42
ref|XP_002522761.1| meiotic recombination protein spo11, putativ...   147   7e-34
ref|XP_002300376.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33
ref|XP_003518548.1| PREDICTED: meiotic recombination protein SPO...   137   1e-30

>emb|CBI39720.3| unnamed protein product [Vitis vinifera]
          Length = 415

 Score =  174 bits (440), Expect = 9e-42
 Identities = 85/121 (70%), Positives = 105/121 (86%), Gaps = 3/121 (2%)
 Frame = +3

Query: 9   RSSVTRHAILKKIREFTKSIIQDLSNGRSPLIILDRHHNYCTNNTGNC---SDLHKSKQI 179
           RSS  R  +L+KIREFT+SI+ DLS G+SP++++DR  NYCT+NTGNC   SDL K K+I
Sbjct: 5   RSSSQRSDLLRKIREFTRSILDDLSIGKSPVVLIDRFRNYCTDNTGNCCCSSDLSKGKEI 64

Query: 180 LVSFQRDCYARRTDVMLRVLLIVQKLLQENKHGSKRDIYYMHPSVFSEQAVVDRAINDIC 359
           L + QR+C+ARR DV+LRVLLIVQ+LLQEN+HGSKRDIYYMHPSVFS+Q+VVDRAINDIC
Sbjct: 65  L-TLQRECHARRLDVLLRVLLIVQQLLQENRHGSKRDIYYMHPSVFSDQSVVDRAINDIC 123

Query: 360 V 362
           +
Sbjct: 124 I 124


>ref|XP_002264649.1| PREDICTED: meiotic recombination protein SPO11-1-like [Vitis
           vinifera]
          Length = 361

 Score =  174 bits (440), Expect = 9e-42
 Identities = 85/121 (70%), Positives = 105/121 (86%), Gaps = 3/121 (2%)
 Frame = +3

Query: 9   RSSVTRHAILKKIREFTKSIIQDLSNGRSPLIILDRHHNYCTNNTGNC---SDLHKSKQI 179
           RSS  R  +L+KIREFT+SI+ DLS G+SP++++DR  NYCT+NTGNC   SDL K K+I
Sbjct: 5   RSSSQRSDLLRKIREFTRSILDDLSIGKSPVVLIDRFRNYCTDNTGNCCCSSDLSKGKEI 64

Query: 180 LVSFQRDCYARRTDVMLRVLLIVQKLLQENKHGSKRDIYYMHPSVFSEQAVVDRAINDIC 359
           L + QR+C+ARR DV+LRVLLIVQ+LLQEN+HGSKRDIYYMHPSVFS+Q+VVDRAINDIC
Sbjct: 65  L-TLQRECHARRLDVLLRVLLIVQQLLQENRHGSKRDIYYMHPSVFSDQSVVDRAINDIC 123

Query: 360 V 362
           +
Sbjct: 124 I 124


>ref|XP_002522761.1| meiotic recombination protein spo11, putative [Ricinus communis]
           gi|223537999|gb|EEF39612.1| meiotic recombination
           protein spo11, putative [Ricinus communis]
          Length = 373

 Score =  147 bits (372), Expect = 7e-34
 Identities = 72/112 (64%), Positives = 93/112 (83%), Gaps = 3/112 (2%)
 Frame = +3

Query: 36  LKKIREFTKSIIQDLSNGRSPLIILDRHHNYCTNNTGNC---SDLHKSKQILVSFQRDCY 206
           L K+ +FTKS+++D+S G+SP I +D+  NYCTN   NC   SDL K ++IL + +++C 
Sbjct: 14  LLKLPDFTKSLVRDVSVGKSPAIFIDKFRNYCTNPEANCFCISDLPKGQEIL-TLKKECN 72

Query: 207 ARRTDVMLRVLLIVQKLLQENKHGSKRDIYYMHPSVFSEQAVVDRAINDICV 362
           ARR DVMLRVL+IVQ+LLQENKHGSKRDIYYMHPSVFS+Q+VVD+AINDIC+
Sbjct: 73  ARRIDVMLRVLVIVQQLLQENKHGSKRDIYYMHPSVFSDQSVVDQAINDICI 124


>ref|XP_002300376.1| predicted protein [Populus trichocarpa] gi|222847634|gb|EEE85181.1|
           predicted protein [Populus trichocarpa]
          Length = 365

 Score =  146 bits (368), Expect = 2e-33
 Identities = 72/119 (60%), Positives = 93/119 (78%), Gaps = 3/119 (2%)
 Frame = +3

Query: 15  SVTRHAILKKIREFTKSIIQDLSNGRSPLIILDRHHNYCTNNTGNC---SDLHKSKQILV 185
           + +  A+L KI++ T S++++LS GRSP I + +  NYCT+   NC   SDL K +Q+L 
Sbjct: 4   NASSRALLSKIKDLTTSLVKELSEGRSPNICIHKFRNYCTDPNSNCLCSSDLPKGQQVL- 62

Query: 186 SFQRDCYARRTDVMLRVLLIVQKLLQENKHGSKRDIYYMHPSVFSEQAVVDRAINDICV 362
           +  R C+A R DV+LRVL+IVQKLLQEN+HGSKRDIYYMHPSVFSEQ+VVDRAINDIC+
Sbjct: 63  TLTRQCHACRIDVLLRVLVIVQKLLQENRHGSKRDIYYMHPSVFSEQSVVDRAINDICI 121


>ref|XP_003518548.1| PREDICTED: meiotic recombination protein SPO11-1-like [Glycine max]
          Length = 367

 Score =  137 bits (344), Expect = 1e-30
 Identities = 70/123 (56%), Positives = 93/123 (75%), Gaps = 3/123 (2%)
 Frame = +3

Query: 3   RSRSSVTRHAILKKIREFTKSIIQDLSNGRSPLIILDRHHNYCTNNTGNC---SDLHKSK 173
           +S S      +L KI+EFT++++ DL+NGRSPLI++DR  +YCT +  NC   SDL   K
Sbjct: 9   QSESQPQSVILLTKIKEFTRALLADLTNGRSPLILIDRFRSYCTLSNSNCFCASDLPCGK 68

Query: 174 QILVSFQRDCYARRTDVMLRVLLIVQKLLQENKHGSKRDIYYMHPSVFSEQAVVDRAIND 353
           ++L + +R  +A R  VMLRV+LIVQKLLQENKH SKRDIYY +PSVF +Q+VVD+AIND
Sbjct: 69  ELL-TLRRKSHAHRLAVMLRVMLIVQKLLQENKHSSKRDIYYTYPSVFLDQSVVDQAIND 127

Query: 354 ICV 362
           IC+
Sbjct: 128 ICI 130


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