BLASTX nr result

ID: Coptis23_contig00030400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030400
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548214.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclo...   100   2e-19
ref|XP_003548216.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...    95   5e-18
ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
ref|XP_002315712.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16
ref|XP_002263628.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...    87   1e-15

>ref|XP_003548214.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclopropane-1-carboxylate
           oxidase homolog 1-like [Glycine max]
          Length = 374

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 43/79 (54%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
 Frame = +1

Query: 1   DKLKSIEHRVLANRLGPRISASCFFKYHFDTNPR--GPIKELISDESGPVYREFSMKEYV 174
           DK KS+EHRVLANR+GPR+S +CFF  HF  + R  GPIKEL+S+E  PVYRE S+K+++
Sbjct: 294 DKFKSVEHRVLANRIGPRVSVACFFTIHFYPSTRIYGPIKELLSEEXPPVYRETSLKDFI 353

Query: 175 QFFFSEGLDGKTGLENFKV 231
            +++++GLDG + L++F +
Sbjct: 354 AYYYNKGLDGNSALDHFMI 372


>ref|XP_003548216.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like
           [Glycine max]
          Length = 369

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 42/79 (53%), Positives = 60/79 (75%), Gaps = 2/79 (2%)
 Frame = +1

Query: 1   DKLKSIEHRVLANRLGPRISASCFFKYHFDTNPR--GPIKELISDESGPVYREFSMKEYV 174
           DK KS+EHRVLANR+GPR+S +CFF  H     R  GPIKEL+S+E  PVYRE S+K+++
Sbjct: 289 DKFKSVEHRVLANRIGPRVSVACFFTLHLYPTTRIYGPIKELLSEEKPPVYRETSLKDFI 348

Query: 175 QFFFSEGLDGKTGLENFKV 231
            ++ ++GLDG + L++F +
Sbjct: 349 AYYDNKGLDGNSALDHFMI 367


>ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|222864753|gb|EEF01884.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 42/79 (53%), Positives = 59/79 (74%), Gaps = 2/79 (2%)
 Frame = +1

Query: 1   DKLKSIEHRVLANRLGPRISASCFFKYHFDTNPR--GPIKELISDESGPVYREFSMKEYV 174
           DK KS+EHRVLANR+GPRIS +CFF   F  + +  GPIKEL+S+ + P+YRE ++ EY+
Sbjct: 301 DKFKSVEHRVLANRVGPRISVACFFSTSFQPSSKLYGPIKELLSEYNPPIYRETTVNEYL 360

Query: 175 QFFFSEGLDGKTGLENFKV 231
            +F+  GLDG + L +FK+
Sbjct: 361 SYFYDHGLDGTSPLIHFKL 379


>ref|XP_002315712.1| predicted protein [Populus trichocarpa] gi|222864752|gb|EEF01883.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/79 (53%), Positives = 59/79 (74%), Gaps = 2/79 (2%)
 Frame = +1

Query: 1   DKLKSIEHRVLANRLGPRISASCFFKYHFDTN--PRGPIKELISDESGPVYREFSMKEYV 174
           DK  S+EHRVLANR+GPR+S + FF  + + N  P GPIKEL+S+ES P YRE ++++YV
Sbjct: 288 DKFISVEHRVLANRIGPRVSVASFFSTNLNPNSRPYGPIKELLSEESPPKYRETTVRDYV 347

Query: 175 QFFFSEGLDGKTGLENFKV 231
            +F  +GLDG + L +FK+
Sbjct: 348 AYFIHKGLDGTSALLHFKL 366


>ref|XP_002263628.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like
           [Vitis vinifera]
          Length = 409

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 43/80 (53%), Positives = 58/80 (72%), Gaps = 3/80 (3%)
 Frame = +1

Query: 1   DKLKSIEHRVLANRLGPRISASCFFKYHFDTN---PRGPIKELISDESGPVYREFSMKEY 171
           DK KS+EHRVLA ++GPRISA+CFF Y    N   P GPIKE +SD + P+YRE  + EY
Sbjct: 299 DKFKSVEHRVLARQVGPRISAACFF-YPSTINTYKPYGPIKEFLSDNNQPIYRETHVNEY 357

Query: 172 VQFFFSEGLDGKTGLENFKV 231
           + ++ S+GLDG + L +FK+
Sbjct: 358 LAYYRSKGLDGTSALPHFKL 377


Top