BLASTX nr result
ID: Coptis23_contig00030400
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00030400 (367 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003548214.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclo... 100 2e-19 ref|XP_003548216.1| PREDICTED: 1-aminocyclopropane-1-carboxylate... 95 5e-18 ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|2... 92 6e-17 ref|XP_002315712.1| predicted protein [Populus trichocarpa] gi|2... 89 4e-16 ref|XP_002263628.1| PREDICTED: 1-aminocyclopropane-1-carboxylate... 87 1e-15 >ref|XP_003548214.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Glycine max] Length = 374 Score = 99.8 bits (247), Expect = 2e-19 Identities = 43/79 (54%), Positives = 63/79 (79%), Gaps = 2/79 (2%) Frame = +1 Query: 1 DKLKSIEHRVLANRLGPRISASCFFKYHFDTNPR--GPIKELISDESGPVYREFSMKEYV 174 DK KS+EHRVLANR+GPR+S +CFF HF + R GPIKEL+S+E PVYRE S+K+++ Sbjct: 294 DKFKSVEHRVLANRIGPRVSVACFFTIHFYPSTRIYGPIKELLSEEXPPVYRETSLKDFI 353 Query: 175 QFFFSEGLDGKTGLENFKV 231 +++++GLDG + L++F + Sbjct: 354 AYYYNKGLDGNSALDHFMI 372 >ref|XP_003548216.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Glycine max] Length = 369 Score = 95.1 bits (235), Expect = 5e-18 Identities = 42/79 (53%), Positives = 60/79 (75%), Gaps = 2/79 (2%) Frame = +1 Query: 1 DKLKSIEHRVLANRLGPRISASCFFKYHFDTNPR--GPIKELISDESGPVYREFSMKEYV 174 DK KS+EHRVLANR+GPR+S +CFF H R GPIKEL+S+E PVYRE S+K+++ Sbjct: 289 DKFKSVEHRVLANRIGPRVSVACFFTLHLYPTTRIYGPIKELLSEEKPPVYRETSLKDFI 348 Query: 175 QFFFSEGLDGKTGLENFKV 231 ++ ++GLDG + L++F + Sbjct: 349 AYYDNKGLDGNSALDHFMI 367 >ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|222864753|gb|EEF01884.1| predicted protein [Populus trichocarpa] Length = 379 Score = 91.7 bits (226), Expect = 6e-17 Identities = 42/79 (53%), Positives = 59/79 (74%), Gaps = 2/79 (2%) Frame = +1 Query: 1 DKLKSIEHRVLANRLGPRISASCFFKYHFDTNPR--GPIKELISDESGPVYREFSMKEYV 174 DK KS+EHRVLANR+GPRIS +CFF F + + GPIKEL+S+ + P+YRE ++ EY+ Sbjct: 301 DKFKSVEHRVLANRVGPRISVACFFSTSFQPSSKLYGPIKELLSEYNPPIYRETTVNEYL 360 Query: 175 QFFFSEGLDGKTGLENFKV 231 +F+ GLDG + L +FK+ Sbjct: 361 SYFYDHGLDGTSPLIHFKL 379 >ref|XP_002315712.1| predicted protein [Populus trichocarpa] gi|222864752|gb|EEF01883.1| predicted protein [Populus trichocarpa] Length = 366 Score = 89.0 bits (219), Expect = 4e-16 Identities = 42/79 (53%), Positives = 59/79 (74%), Gaps = 2/79 (2%) Frame = +1 Query: 1 DKLKSIEHRVLANRLGPRISASCFFKYHFDTN--PRGPIKELISDESGPVYREFSMKEYV 174 DK S+EHRVLANR+GPR+S + FF + + N P GPIKEL+S+ES P YRE ++++YV Sbjct: 288 DKFISVEHRVLANRIGPRVSVASFFSTNLNPNSRPYGPIKELLSEESPPKYRETTVRDYV 347 Query: 175 QFFFSEGLDGKTGLENFKV 231 +F +GLDG + L +FK+ Sbjct: 348 AYFIHKGLDGTSALLHFKL 366 >ref|XP_002263628.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Vitis vinifera] Length = 409 Score = 87.0 bits (214), Expect = 1e-15 Identities = 43/80 (53%), Positives = 58/80 (72%), Gaps = 3/80 (3%) Frame = +1 Query: 1 DKLKSIEHRVLANRLGPRISASCFFKYHFDTN---PRGPIKELISDESGPVYREFSMKEY 171 DK KS+EHRVLA ++GPRISA+CFF Y N P GPIKE +SD + P+YRE + EY Sbjct: 299 DKFKSVEHRVLARQVGPRISAACFF-YPSTINTYKPYGPIKEFLSDNNQPIYRETHVNEY 357 Query: 172 VQFFFSEGLDGKTGLENFKV 231 + ++ S+GLDG + L +FK+ Sbjct: 358 LAYYRSKGLDGTSALPHFKL 377