BLASTX nr result

ID: Coptis23_contig00030391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030391
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268309.1| PREDICTED: uncharacterized protein LOC100244...   118   6e-25
emb|CAN77779.1| hypothetical protein VITISV_004172 [Vitis vinifera]   118   6e-25
ref|XP_002531453.1| zinc ion binding protein, putative [Ricinus ...   114   6e-24
ref|XP_002324580.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_002331005.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-20

>ref|XP_002268309.1| PREDICTED: uncharacterized protein LOC100244833 [Vitis vinifera]
           gi|296084556|emb|CBI25577.3| unnamed protein product
           [Vitis vinifera]
          Length = 245

 Score =  118 bits (295), Expect = 6e-25
 Identities = 56/97 (57%), Positives = 68/97 (70%)
 Frame = +2

Query: 2   LQEPYIHCSLGCKVEFVLEHHGDLSLYLRTCKSLQLSPDFLLPQDIGYDEITNEAPXXXX 181
           LQEPYIHCSLGCKV+F+L+H+ DLS YLRTC SLQLSPDFL+P D+G DE+TNE P    
Sbjct: 120 LQEPYIHCSLGCKVDFLLKHNKDLSPYLRTCHSLQLSPDFLVPPDMGEDEMTNETPHSTI 179

Query: 182 XXXXXXXXXXXXXXXXKNVSIPCTNFVKKKRSGLFVC 292
                           +N+S+ CT  V+KKRSGL+VC
Sbjct: 180 VDCDEPMSSSSGSSGSENMSMMCTEIVRKKRSGLYVC 216


>emb|CAN77779.1| hypothetical protein VITISV_004172 [Vitis vinifera]
          Length = 714

 Score =  118 bits (295), Expect = 6e-25
 Identities = 56/97 (57%), Positives = 68/97 (70%)
 Frame = +2

Query: 2   LQEPYIHCSLGCKVEFVLEHHGDLSLYLRTCKSLQLSPDFLLPQDIGYDEITNEAPXXXX 181
           LQEPYIHCSLGCKV+F+L+H+ DLS YLRTC SLQLSPDFL+P D+G DE+TNE P    
Sbjct: 589 LQEPYIHCSLGCKVDFLLKHNKDLSPYLRTCHSLQLSPDFLVPPDMGEDEMTNETPHSTI 648

Query: 182 XXXXXXXXXXXXXXXXKNVSIPCTNFVKKKRSGLFVC 292
                           +N+S+ CT  V+KKRSGL+VC
Sbjct: 649 VDCDEPMSSSSGSSGSENMSMMCTEIVRKKRSGLYVC 685


>ref|XP_002531453.1| zinc ion binding protein, putative [Ricinus communis]
           gi|223528946|gb|EEF30940.1| zinc ion binding protein,
           putative [Ricinus communis]
          Length = 269

 Score =  114 bits (286), Expect = 6e-24
 Identities = 54/97 (55%), Positives = 66/97 (68%)
 Frame = +2

Query: 2   LQEPYIHCSLGCKVEFVLEHHGDLSLYLRTCKSLQLSPDFLLPQDIGYDEITNEAPXXXX 181
           LQEP+ HCSLGCKV+FVL+H+ DLS YLR C SL LSPDFL+PQD+G DE+TNE P    
Sbjct: 144 LQEPFFHCSLGCKVDFVLKHYKDLSPYLRRCNSLTLSPDFLIPQDMGDDEMTNETPHSTI 203

Query: 182 XXXXXXXXXXXXXXXXKNVSIPCTNFVKKKRSGLFVC 292
                           +N+S+ CT  V+KKRSGL+VC
Sbjct: 204 VDSEDPMSWSSGSSGSENMSMVCTEIVRKKRSGLYVC 240


>ref|XP_002324580.1| predicted protein [Populus trichocarpa] gi|222866014|gb|EEF03145.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/97 (52%), Positives = 63/97 (64%)
 Frame = +2

Query: 2   LQEPYIHCSLGCKVEFVLEHHGDLSLYLRTCKSLQLSPDFLLPQDIGYDEITNEAPXXXX 181
           LQEP+IHCSLGCKV+FVL+H+ DLS YLR C +L L PDF +PQD+  DE+TNE P    
Sbjct: 118 LQEPFIHCSLGCKVDFVLKHYKDLSPYLRRCNALTLGPDFFIPQDMADDEMTNETPHSTI 177

Query: 182 XXXXXXXXXXXXXXXXKNVSIPCTNFVKKKRSGLFVC 292
                           +N+SI  T  V+KKRSGL+VC
Sbjct: 178 VDSDEPMSWSSSSSGSENMSIASTGIVRKKRSGLYVC 214


>ref|XP_002331005.1| predicted protein [Populus trichocarpa] gi|222872935|gb|EEF10066.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score =  103 bits (256), Expect = 2e-20
 Identities = 48/97 (49%), Positives = 62/97 (63%)
 Frame = +2

Query: 2   LQEPYIHCSLGCKVEFVLEHHGDLSLYLRTCKSLQLSPDFLLPQDIGYDEITNEAPXXXX 181
           LQEP+ HCSLGCKV+FVL+H+ DLS YLR C +L L PDF +PQD+  DE+TNE P    
Sbjct: 118 LQEPFAHCSLGCKVDFVLKHYKDLSPYLRRCNTLTLGPDFFIPQDLADDEMTNETPHSTI 177

Query: 182 XXXXXXXXXXXXXXXXKNVSIPCTNFVKKKRSGLFVC 292
                           +N+S+  +  V+KKRSGL+VC
Sbjct: 178 VDSDEPMSWSSSSSGSENMSMASSEIVRKKRSGLYVC 214


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