BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030386
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containi...    70   2e-10
ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containi...    69   4e-10
ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containi...    68   7e-10
ref|XP_002324235.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containi...    67   1e-09

>ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Brachypodium distachyon]
          Length = 598

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 28/37 (75%), Positives = 33/37 (89%)
 Frame = +2

Query: 5   HSAMKLISKVFNRLIVIRDRSRFHHFSGGLCSCKDYW 115
           H A+KLISKV++R I++RDRSRFHHF GG CSCKDYW
Sbjct: 562 HMAIKLISKVYDREIIVRDRSRFHHFKGGACSCKDYW 598


>ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like, partial [Brachypodium distachyon]
          Length = 745

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = +2

Query: 5   HSAMKLISKVFNRLIVIRDRSRFHHFSGGLCSCKDYW 115
           HSA KLISKV+NR I++RDR+RFHHF  GLCSC DYW
Sbjct: 709 HSATKLISKVYNREIIVRDRNRFHHFKDGLCSCNDYW 745


>ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 591

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 28/37 (75%), Positives = 33/37 (89%)
 Frame = +2

Query: 5   HSAMKLISKVFNRLIVIRDRSRFHHFSGGLCSCKDYW 115
           H A+KLI+K+++R IVIRDRSRFHHF GG CSCKDYW
Sbjct: 555 HMAIKLIAKIYDREIVIRDRSRFHHFRGGSCSCKDYW 591


>ref|XP_002324235.1| predicted protein [Populus trichocarpa] gi|222865669|gb|EEF02800.1|
           predicted protein [Populus trichocarpa]
          Length = 736

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 28/37 (75%), Positives = 31/37 (83%)
 Frame = +2

Query: 5   HSAMKLISKVFNRLIVIRDRSRFHHFSGGLCSCKDYW 115
           HSA KLISK+FNR I+ RDR+RFHHF  G CSCKDYW
Sbjct: 700 HSATKLISKIFNREIIARDRNRFHHFKDGSCSCKDYW 736


>ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 613

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/37 (78%), Positives = 32/37 (86%)
 Frame = +2

Query: 5   HSAMKLISKVFNRLIVIRDRSRFHHFSGGLCSCKDYW 115
           H A+KLISKVF+R IV+RDRSRFHHF  G CSCKDYW
Sbjct: 577 HLAIKLISKVFDREIVVRDRSRFHHFKDGHCSCKDYW 613